Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_464 and Ac3H11_465 are separated by 108 nucleotides Ac3H11_465 and Ac3H11_466 are separated by 92 nucleotides Ac3H11_466 and Ac3H11_467 are separated by 271 nucleotides Ac3H11_467 and Ac3H11_468 are separated by 151 nucleotides
Ac3H11_464 - Probable inner membrane transmembrane protein, at 154,923 to 156,623
_464
Ac3H11_465 - LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent, at 156,732 to 156,986
_465
Ac3H11_466 - Transcription termination factor Rho, at 157,079 to 158,341
_466
Ac3H11_467 - Thioredoxin, at 158,613 to 158,945
_467
Ac3H11_468 - Helicase, at 159,097 to 161,652
_468
Position (kb) 157
158
159 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 156.660 kb on + strand at 156.660 kb on + strand at 156.661 kb on - strand at 156.733 kb on + strand at 156.733 kb on + strand at 158.515 kb on + strand at 158.516 kb on - strand at 158.794 kb on + strand, within Ac3H11_467 at 158.794 kb on + strand, within Ac3H11_467 at 158.794 kb on + strand, within Ac3H11_467 at 158.794 kb on + strand, within Ac3H11_467 at 158.794 kb on + strand, within Ac3H11_467 at 158.794 kb on + strand, within Ac3H11_467 at 158.795 kb on - strand, within Ac3H11_467 at 158.795 kb on - strand, within Ac3H11_467 at 158.795 kb on - strand, within Ac3H11_467 at 158.795 kb on - strand, within Ac3H11_467 at 158.795 kb on - strand, within Ac3H11_467 at 158.860 kb on + strand, within Ac3H11_467 at 158.860 kb on + strand, within Ac3H11_467 at 158.860 kb on + strand, within Ac3H11_467 at 158.861 kb on - strand, within Ac3H11_467 at 158.983 kb on + strand at 158.983 kb on + strand at 158.983 kb on + strand at 158.983 kb on + strand at 158.983 kb on + strand at 158.983 kb on + strand at 158.983 kb on + strand at 158.984 kb on - strand at 159.054 kb on + strand at 159.055 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 156,660 + +0.7 156,660 + +1.5 156,661 - -0.0 156,733 + -0.2 156,733 + -0.4 158,515 + +0.3 158,516 - +0.3 158,794 + Ac3H11_467 0.54 +1.3 158,794 + Ac3H11_467 0.54 -2.3 158,794 + Ac3H11_467 0.54 -1.5 158,794 + Ac3H11_467 0.54 -1.1 158,794 + Ac3H11_467 0.54 -1.6 158,794 + Ac3H11_467 0.54 -3.0 158,795 - Ac3H11_467 0.55 -3.5 158,795 - Ac3H11_467 0.55 -3.1 158,795 - Ac3H11_467 0.55 -2.8 158,795 - Ac3H11_467 0.55 -2.3 158,795 - Ac3H11_467 0.55 -0.5 158,860 + Ac3H11_467 0.74 -0.4 158,860 + Ac3H11_467 0.74 -0.7 158,860 + Ac3H11_467 0.74 -3.5 158,861 - Ac3H11_467 0.74 -2.1 158,983 + -2.2 158,983 + -2.4 158,983 + -2.0 158,983 + -3.5 158,983 + -1.0 158,983 + -2.5 158,983 + -5.0 158,984 - -0.3 159,054 + -0.2 159,055 - -1.5
Or see this region's nucleotide sequence