Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2158 and Ac3H11_2159 overlap by 4 nucleotides Ac3H11_2159 and Ac3H11_2160 are separated by 166 nucleotides Ac3H11_2160 and Ac3H11_2161 are separated by 535 nucleotides
Ac3H11_2158 - Inner membrane protein CreD, at 387,120 to 388,625
_2158
Ac3H11_2159 - hypothetical protein, at 388,622 to 388,990
_2159
Ac3H11_2160 - sensory box histidine kinase/response regulator, at 389,157 to 389,822
_2160
Ac3H11_2161 - Hemerythrin-like protein RSc0777, at 390,358 to 390,894
_2161
Position (kb)
389
390 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 388.167 kb on + strand, within Ac3H11_2158 at 388.168 kb on - strand, within Ac3H11_2158 at 388.168 kb on - strand, within Ac3H11_2158 at 388.248 kb on + strand, within Ac3H11_2158 at 388.287 kb on + strand, within Ac3H11_2158 at 388.288 kb on - strand, within Ac3H11_2158 at 388.288 kb on - strand, within Ac3H11_2158 at 388.290 kb on + strand, within Ac3H11_2158 at 388.290 kb on + strand, within Ac3H11_2158 at 388.290 kb on + strand, within Ac3H11_2158 at 388.290 kb on + strand, within Ac3H11_2158 at 388.291 kb on - strand, within Ac3H11_2158 at 388.291 kb on - strand, within Ac3H11_2158 at 388.291 kb on - strand, within Ac3H11_2158 at 388.291 kb on - strand, within Ac3H11_2158 at 388.325 kb on + strand, within Ac3H11_2158 at 388.326 kb on - strand, within Ac3H11_2158 at 388.356 kb on + strand, within Ac3H11_2158 at 388.356 kb on + strand, within Ac3H11_2158 at 388.356 kb on + strand, within Ac3H11_2158 at 388.356 kb on + strand, within Ac3H11_2158 at 388.356 kb on + strand, within Ac3H11_2158 at 388.356 kb on + strand, within Ac3H11_2158 at 388.357 kb on - strand, within Ac3H11_2158 at 388.357 kb on - strand, within Ac3H11_2158 at 388.357 kb on - strand, within Ac3H11_2158 at 388.368 kb on + strand, within Ac3H11_2158 at 388.368 kb on + strand, within Ac3H11_2158 at 388.368 kb on + strand, within Ac3H11_2158 at 388.368 kb on + strand, within Ac3H11_2158 at 388.368 kb on + strand, within Ac3H11_2158 at 388.368 kb on + strand, within Ac3H11_2158 at 388.368 kb on + strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.369 kb on - strand, within Ac3H11_2158 at 388.470 kb on + strand, within Ac3H11_2158 at 388.470 kb on + strand, within Ac3H11_2158 at 389.061 kb on + strand at 389.061 kb on + strand at 389.061 kb on + strand at 389.061 kb on + strand at 389.062 kb on - strand at 389.062 kb on - strand at 389.062 kb on - strand at 389.062 kb on - strand at 389.062 kb on - strand at 389.062 kb on - strand at 389.063 kb on + strand at 389.063 kb on + strand at 389.063 kb on + strand at 389.064 kb on - strand at 389.064 kb on - strand at 389.064 kb on - strand at 389.104 kb on - strand at 389.111 kb on - strand at 389.123 kb on + strand at 389.123 kb on + strand at 389.124 kb on - strand at 389.127 kb on + strand at 389.127 kb on + strand at 389.127 kb on + strand at 389.127 kb on + strand at 389.127 kb on + strand at 389.127 kb on + strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.128 kb on - strand at 389.132 kb on - strand at 389.132 kb on - strand at 389.137 kb on + strand at 389.137 kb on + strand at 389.138 kb on - strand at 389.150 kb on + strand at 389.150 kb on + strand at 389.150 kb on + strand at 389.150 kb on + strand at 389.150 kb on + strand at 389.151 kb on - strand at 389.151 kb on - strand at 389.151 kb on - strand at 389.151 kb on - strand at 389.158 kb on + strand at 389.158 kb on + strand at 389.158 kb on + strand at 389.158 kb on + strand at 389.158 kb on + strand at 389.159 kb on - strand at 389.200 kb on + strand at 389.201 kb on - strand at 389.201 kb on - strand at 389.201 kb on - strand at 389.201 kb on - strand at 389.637 kb on - strand, within Ac3H11_2160 at 389.637 kb on - strand, within Ac3H11_2160 at 389.816 kb on + strand at 389.849 kb on + strand at 389.849 kb on + strand at 389.885 kb on + strand at 389.885 kb on + strand at 389.886 kb on - strand at 390.095 kb on + strand at 390.095 kb on + strand at 390.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 388,167 + Ac3H11_2158 0.70 +0.2 388,168 - Ac3H11_2158 0.70 +0.3 388,168 - Ac3H11_2158 0.70 -0.9 388,248 + Ac3H11_2158 0.75 -0.2 388,287 + Ac3H11_2158 0.77 -0.4 388,288 - Ac3H11_2158 0.78 -0.1 388,288 - Ac3H11_2158 0.78 -0.3 388,290 + Ac3H11_2158 0.78 -2.3 388,290 + Ac3H11_2158 0.78 -0.8 388,290 + Ac3H11_2158 0.78 -0.3 388,290 + Ac3H11_2158 0.78 -0.7 388,291 - Ac3H11_2158 0.78 -0.2 388,291 - Ac3H11_2158 0.78 -0.9 388,291 - Ac3H11_2158 0.78 -0.4 388,291 - Ac3H11_2158 0.78 -0.7 388,325 + Ac3H11_2158 0.80 -0.9 388,326 - Ac3H11_2158 0.80 -0.8 388,356 + Ac3H11_2158 0.82 -0.5 388,356 + Ac3H11_2158 0.82 +1.1 388,356 + Ac3H11_2158 0.82 -0.6 388,356 + Ac3H11_2158 0.82 -0.9 388,356 + Ac3H11_2158 0.82 +1.3 388,356 + Ac3H11_2158 0.82 -1.1 388,357 - Ac3H11_2158 0.82 -1.1 388,357 - Ac3H11_2158 0.82 +0.2 388,357 - Ac3H11_2158 0.82 -0.9 388,368 + Ac3H11_2158 0.83 -0.3 388,368 + Ac3H11_2158 0.83 -0.4 388,368 + Ac3H11_2158 0.83 -1.2 388,368 + Ac3H11_2158 0.83 -1.6 388,368 + Ac3H11_2158 0.83 -0.8 388,368 + Ac3H11_2158 0.83 -0.8 388,368 + Ac3H11_2158 0.83 -2.6 388,369 - Ac3H11_2158 0.83 -0.0 388,369 - Ac3H11_2158 0.83 -2.2 388,369 - Ac3H11_2158 0.83 +0.4 388,369 - Ac3H11_2158 0.83 -0.2 388,369 - Ac3H11_2158 0.83 -0.6 388,369 - Ac3H11_2158 0.83 -0.6 388,369 - Ac3H11_2158 0.83 +0.3 388,369 - Ac3H11_2158 0.83 -0.7 388,470 + Ac3H11_2158 0.90 -0.2 388,470 + Ac3H11_2158 0.90 -0.9 389,061 + -0.5 389,061 + -1.7 389,061 + -0.4 389,061 + +0.2 389,062 - -2.5 389,062 - -0.6 389,062 - -0.2 389,062 - -0.5 389,062 - -1.0 389,062 - -0.7 389,063 + +1.6 389,063 + -0.9 389,063 + -0.6 389,064 - -0.6 389,064 - -0.2 389,064 - -0.6 389,104 - -1.8 389,111 - -0.5 389,123 + -0.2 389,123 + -0.6 389,124 - -0.3 389,127 + -0.6 389,127 + -0.2 389,127 + -0.2 389,127 + +0.3 389,127 + +0.1 389,127 + -0.4 389,128 - +0.5 389,128 - +0.8 389,128 - +0.2 389,128 - -0.3 389,128 - -0.3 389,128 - -0.9 389,128 - +0.6 389,128 - -0.4 389,128 - -0.3 389,128 - -0.2 389,128 - +0.8 389,132 - -0.7 389,132 - -0.5 389,137 + -1.0 389,137 + -0.7 389,138 - -0.9 389,150 + +0.1 389,150 + -1.6 389,150 + -0.1 389,150 + -3.4 389,150 + -2.6 389,151 - -0.8 389,151 - -0.4 389,151 - +0.5 389,151 - -1.0 389,158 + +0.4 389,158 + -1.7 389,158 + -1.0 389,158 + -0.3 389,158 + -0.5 389,159 - -1.3 389,200 + -1.1 389,201 - -0.6 389,201 - -0.1 389,201 - -0.5 389,201 - +0.1 389,637 - Ac3H11_2160 0.72 -0.6 389,637 - Ac3H11_2160 0.72 -1.8 389,816 + -0.3 389,849 + -0.2 389,849 + -0.6 389,885 + -0.3 389,885 + +1.7 389,886 - -0.2 390,095 + -0.5 390,095 + +0.1 390,273 - -0.5
Or see this region's nucleotide sequence