Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1381 and Ac3H11_1382 are separated by 27 nucleotides Ac3H11_1382 and Ac3H11_1383 overlap by 8 nucleotides Ac3H11_1383 and Ac3H11_1384 overlap by 4 nucleotides
Ac3H11_1381 - RNA polymerase sigma factor for flagellar operon, at 69,160 to 69,876
_1381
Ac3H11_1382 - FIG00538194: hypothetical protein, at 69,904 to 70,701
_1382
Ac3H11_1383 - Flagellar biosynthesis protein FlhF, at 70,694 to 72,217
_1383
Ac3H11_1384 - Flagellar biosynthesis protein FlhA, at 72,214 to 74,295
_1384
Position (kb) 70
71
72
73 Strain fitness (log2 ratio) -1
0
1
2 at 69.872 kb on + strand at 69.872 kb on + strand at 69.872 kb on + strand at 69.872 kb on + strand at 69.873 kb on - strand at 69.873 kb on - strand at 69.873 kb on - strand at 70.208 kb on + strand, within Ac3H11_1382 at 70.208 kb on + strand, within Ac3H11_1382 at 70.208 kb on + strand, within Ac3H11_1382 at 70.209 kb on - strand, within Ac3H11_1382 at 70.209 kb on - strand, within Ac3H11_1382 at 70.209 kb on - strand, within Ac3H11_1382 at 70.209 kb on - strand, within Ac3H11_1382 at 70.322 kb on + strand, within Ac3H11_1382 at 70.322 kb on + strand, within Ac3H11_1382 at 70.322 kb on + strand, within Ac3H11_1382 at 70.323 kb on - strand, within Ac3H11_1382 at 70.323 kb on - strand, within Ac3H11_1382 at 70.334 kb on + strand, within Ac3H11_1382 at 70.551 kb on - strand, within Ac3H11_1382 at 71.211 kb on + strand, within Ac3H11_1383 at 71.212 kb on - strand, within Ac3H11_1383 at 71.212 kb on - strand, within Ac3H11_1383 at 71.244 kb on + strand, within Ac3H11_1383 at 71.245 kb on - strand, within Ac3H11_1383 at 71.245 kb on - strand, within Ac3H11_1383 at 71.376 kb on + strand, within Ac3H11_1383 at 71.376 kb on + strand, within Ac3H11_1383 at 71.377 kb on - strand, within Ac3H11_1383 at 71.377 kb on - strand, within Ac3H11_1383 at 71.505 kb on + strand, within Ac3H11_1383 at 71.880 kb on + strand, within Ac3H11_1383 at 71.880 kb on + strand, within Ac3H11_1383 at 71.880 kb on + strand, within Ac3H11_1383 at 71.880 kb on + strand, within Ac3H11_1383 at 71.880 kb on + strand, within Ac3H11_1383 at 71.881 kb on - strand, within Ac3H11_1383 at 71.881 kb on - strand, within Ac3H11_1383 at 71.881 kb on - strand, within Ac3H11_1383 at 71.881 kb on - strand, within Ac3H11_1383 at 71.881 kb on - strand, within Ac3H11_1383 at 72.231 kb on + strand at 72.533 kb on + strand, within Ac3H11_1384 at 72.533 kb on + strand, within Ac3H11_1384 at 72.534 kb on - strand, within Ac3H11_1384 at 72.534 kb on - strand, within Ac3H11_1384 at 72.534 kb on - strand, within Ac3H11_1384 at 72.534 kb on - strand, within Ac3H11_1384 at 72.867 kb on + strand, within Ac3H11_1384 at 72.867 kb on + strand, within Ac3H11_1384 at 72.867 kb on + strand, within Ac3H11_1384 at 72.867 kb on + strand, within Ac3H11_1384 at 72.868 kb on - strand, within Ac3H11_1384 at 73.111 kb on + strand, within Ac3H11_1384 at 73.111 kb on + strand, within Ac3H11_1384 at 73.111 kb on + strand, within Ac3H11_1384 at 73.111 kb on + strand, within Ac3H11_1384 at 73.112 kb on - strand, within Ac3H11_1384 at 73.112 kb on - strand, within Ac3H11_1384 at 73.112 kb on - strand, within Ac3H11_1384 at 73.112 kb on - strand, within Ac3H11_1384 at 73.112 kb on - strand, within Ac3H11_1384 at 73.112 kb on - strand, within Ac3H11_1384 at 73.135 kb on + strand, within Ac3H11_1384
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 69,872 + -1.1 69,872 + -0.3 69,872 + -1.0 69,872 + +0.4 69,873 - -0.9 69,873 - +0.3 69,873 - -0.9 70,208 + Ac3H11_1382 0.38 -0.5 70,208 + Ac3H11_1382 0.38 -0.5 70,208 + Ac3H11_1382 0.38 +0.1 70,209 - Ac3H11_1382 0.38 -0.2 70,209 - Ac3H11_1382 0.38 -0.2 70,209 - Ac3H11_1382 0.38 -0.2 70,209 - Ac3H11_1382 0.38 +0.2 70,322 + Ac3H11_1382 0.52 -0.5 70,322 + Ac3H11_1382 0.52 +0.7 70,322 + Ac3H11_1382 0.52 -0.4 70,323 - Ac3H11_1382 0.53 +0.3 70,323 - Ac3H11_1382 0.53 -1.4 70,334 + Ac3H11_1382 0.54 +0.2 70,551 - Ac3H11_1382 0.81 +0.2 71,211 + Ac3H11_1383 0.34 +0.5 71,212 - Ac3H11_1383 0.34 -1.3 71,212 - Ac3H11_1383 0.34 +0.1 71,244 + Ac3H11_1383 0.36 +1.2 71,245 - Ac3H11_1383 0.36 -0.0 71,245 - Ac3H11_1383 0.36 +0.7 71,376 + Ac3H11_1383 0.45 -0.1 71,376 + Ac3H11_1383 0.45 +0.6 71,377 - Ac3H11_1383 0.45 +0.9 71,377 - Ac3H11_1383 0.45 +0.3 71,505 + Ac3H11_1383 0.53 +0.0 71,880 + Ac3H11_1383 0.78 -0.3 71,880 + Ac3H11_1383 0.78 +0.5 71,880 + Ac3H11_1383 0.78 +0.5 71,880 + Ac3H11_1383 0.78 +1.2 71,880 + Ac3H11_1383 0.78 +1.2 71,881 - Ac3H11_1383 0.78 -0.2 71,881 - Ac3H11_1383 0.78 -0.9 71,881 - Ac3H11_1383 0.78 +0.3 71,881 - Ac3H11_1383 0.78 +0.0 71,881 - Ac3H11_1383 0.78 -0.7 72,231 + +0.5 72,533 + Ac3H11_1384 0.15 -0.6 72,533 + Ac3H11_1384 0.15 -0.6 72,534 - Ac3H11_1384 0.15 +0.7 72,534 - Ac3H11_1384 0.15 +0.6 72,534 - Ac3H11_1384 0.15 +0.7 72,534 - Ac3H11_1384 0.15 +0.4 72,867 + Ac3H11_1384 0.31 +0.2 72,867 + Ac3H11_1384 0.31 +1.8 72,867 + Ac3H11_1384 0.31 +0.8 72,867 + Ac3H11_1384 0.31 +0.5 72,868 - Ac3H11_1384 0.31 +0.6 73,111 + Ac3H11_1384 0.43 -0.2 73,111 + Ac3H11_1384 0.43 -0.1 73,111 + Ac3H11_1384 0.43 +0.5 73,111 + Ac3H11_1384 0.43 -0.6 73,112 - Ac3H11_1384 0.43 +2.0 73,112 - Ac3H11_1384 0.43 +0.6 73,112 - Ac3H11_1384 0.43 +0.6 73,112 - Ac3H11_1384 0.43 +0.5 73,112 - Ac3H11_1384 0.43 -0.5 73,112 - Ac3H11_1384 0.43 -0.1 73,135 + Ac3H11_1384 0.44 +0.8
Or see this region's nucleotide sequence