Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28905

Experiment: sodium fluoride 6.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 6.25 mM
6,285,110	+		AO353_28895	0.70	+0.8
6,285,111	-		AO353_28895	0.70	+0.7
6,285,111	-		AO353_28895	0.70	-0.0
6,285,116	+		AO353_28895	0.71	+0.7
6,285,136	+		AO353_28895	0.75	+1.1
6,285,136	+		AO353_28895	0.75	+0.9
6,285,136	+		AO353_28895	0.75	+1.0
6,285,136	+		AO353_28895	0.75	+0.1
6,285,136	+		AO353_28895	0.75	-0.2
6,285,136	+		AO353_28895	0.75	-1.0
6,285,136	+		AO353_28895	0.75	+0.9
6,285,137	-		AO353_28895	0.75	-1.7
6,285,137	-		AO353_28895	0.75	+0.4
6,285,137	-		AO353_28895	0.75	+0.3
6,285,137	-		AO353_28895	0.75	-1.6
6,285,137	-		AO353_28895	0.75	-1.7
6,285,137	-		AO353_28895	0.75	-0.5
6,285,137	-		AO353_28895	0.75	-0.6
6,285,137	-				-1.2
6,285,160	+		AO353_28895	0.80	-0.5
6,285,160	+		AO353_28895	0.80	-0.1
6,285,160	+		AO353_28895	0.80	+0.2
6,285,160	+		AO353_28895	0.80	-1.5
6,285,160	+		AO353_28895	0.80	+0.7
6,285,160	+		AO353_28895	0.80	+0.7
6,285,160	+		AO353_28895	0.80	+0.3
6,285,161	-		AO353_28895	0.80	+0.6
6,285,161	-		AO353_28895	0.80	+0.0
6,285,161	-		AO353_28895	0.80	-0.0
6,285,161	-		AO353_28895	0.80	-0.4
6,285,161	-		AO353_28895	0.80	-0.0
6,285,161	-		AO353_28895	0.80	-2.0
6,285,161	-		AO353_28895	0.80	-0.2
6,285,176	+		AO353_28895	0.83	-0.2
6,285,177	-		AO353_28895	0.84	-0.3
6,285,265	+				+0.3
6,285,265	+				-0.4
6,285,265	+				+0.9
6,285,265	+				-0.7
6,285,265	+				-1.6
6,285,265	+				+0.4
6,285,265	+				-0.9
6,285,265	+				+0.5
6,285,265	+				+0.2
6,285,265	+				+0.1
6,285,265	+				+0.1
6,285,265	+				-0.2
6,285,265	+				+1.2
6,285,265	+				+0.5
6,285,265	+				-2.6
6,285,265	+				-1.1
6,285,265	+				-0.4
6,285,265	+				-0.1
6,285,265	+				+3.1
6,285,265	+				+1.8
6,285,265	+				-0.0
6,285,265	+				+1.9
6,285,265	+				+1.0
6,285,266	-				-1.5
6,285,266	-				-0.9
6,285,266	-				+0.8
6,285,266	-				+1.8
6,285,266	-				+0.3
6,285,266	-				+0.3
6,285,266	-				+1.3
6,285,266	-				-0.9
6,285,266	-				-1.5
6,285,266	-				-0.1
6,285,266	-				-1.3
6,285,266	-				-1.5
6,285,266	-				+0.9
6,285,266	-				-0.0
6,285,266	-				+0.1
6,285,266	-				+0.3
6,285,266	-				+0.1
6,285,266	-				-2.3
6,285,266	-				+0.4
6,285,266	-				+1.6
6,285,266	-				-2.1
6,285,266	-				-1.7
6,285,266	-				+0.3
6,285,266	-				-0.3
6,285,266	-				+0.1
6,285,266	-				-1.3
6,285,266	-				+0.5
6,285,275	+				-1.3
6,285,276	-				-0.1
6,285,280	-				-0.2
6,285,280	-				+0.5
6,285,280	-				+1.1
6,285,338	-		AO353_28900	0.30	-0.9
6,285,345	-		AO353_28900	0.33	-2.6
6,285,356	+		AO353_28900	0.38	+1.3
6,285,499	+				+0.5
6,285,499	+				-0.7
6,285,499	+				+0.5
6,285,500	-				-0.7
6,285,531	+				+0.8
6,285,531	+				-0.2
6,285,532	-				-0.5
6,285,532	-				+0.6
6,285,532	-				+0.3
6,285,532	-				+0.5
6,285,534	+				-0.3
6,285,535	-				+0.1
6,285,544	+				-0.6
6,285,545	-				+1.1
6,285,545	-				-0.5
6,285,579	+				-0.7
6,285,579	+				+0.7
6,285,579	+				+0.3
6,285,579	+				-0.2
6,285,579	+				-0.5
6,285,579	+				+0.1
6,285,580	-				+0.4
6,285,610	-				-0.4
6,285,629	+				+1.9
6,285,630	-				+0.3
6,285,740	+				-1.7
6,285,740	+				-0.5
6,285,740	+				+1.0
6,285,740	+				+1.1
6,285,740	+				-0.8
6,285,740	+				+1.4
6,285,741	-				+0.5
6,285,745	+				-0.7
6,285,745	+				-1.5
6,285,803	-				-0.5
6,285,878	-				+0.2
6,285,910	+				-1.1
6,285,910	+				+0.2
6,285,910	+				-1.2
6,286,031	-				-0.2
6,286,050	+				-0.3
6,286,051	-				+1.3
6,286,051	-				-0.0
6,286,148	+				+0.6
6,286,148	+				-1.6
6,286,148	+				+0.7
6,286,148	+				-0.2
6,286,149	-				-0.1
6,286,149	-				-1.5
6,286,149	-				-1.6
6,286,189	+		AO353_28905	0.12	+0.7
6,286,189	+		AO353_28905	0.12	-1.0
6,286,190	-		AO353_28905	0.12	-1.1
6,286,190	-		AO353_28905	0.12	-0.2
6,286,256	+		AO353_28905	0.22	-0.4
6,286,256	+		AO353_28905	0.22	-1.7
6,286,256	+		AO353_28905	0.22	-0.2
6,286,257	-		AO353_28905	0.22	-0.3
6,286,257	-		AO353_28905	0.22	+0.5
6,286,339	+		AO353_28905	0.34	-0.8
6,286,340	-		AO353_28905	0.35	+0.4
6,286,340	-		AO353_28905	0.35	-0.7
6,286,350	-		AO353_28905	0.36	-0.9
6,286,375	+		AO353_28905	0.40	-0.1
6,286,375	+		AO353_28905	0.40	-1.1
6,286,376	-		AO353_28905	0.40	-1.4
6,286,376	-		AO353_28905	0.40	-1.6
6,286,493	-		AO353_28905	0.58	-1.1
6,286,493	-		AO353_28905	0.58	-0.9
6,286,535	+		AO353_28905	0.64	-0.9
6,286,535	+		AO353_28905	0.64	-1.3
6,286,595	+		AO353_28905	0.73	+0.4
6,286,595	+		AO353_28905	0.73	+0.1
6,286,619	-		AO353_28905	0.76	-0.5
6,286,619	-		AO353_28905	0.76	-1.1
6,286,630	-		AO353_28905	0.78	-0.2
6,286,660	-		AO353_28905	0.83	-1.4
6,286,660	-		AO353_28905	0.83	-0.3
6,286,690	+		AO353_28905	0.87	+0.3
6,286,691	-		AO353_28905	0.87	+0.9
6,286,691	-		AO353_28905	0.87	-1.2
6,286,691	-		AO353_28905	0.87	-2.6
6,286,743	-				-0.5
6,286,790	+				+1.0
6,286,790	+				+0.9
6,286,794	+				+0.2
6,286,794	+				-0.5
6,286,794	+				-1.3
6,286,794	+				+2.1
6,286,794	+				+1.1
6,286,794	+				-0.8
6,286,794	+				+0.0
6,286,795	-				-2.1
6,286,795	-				-0.2
6,286,795	-				+1.0
6,286,795	-				-0.0
6,286,828	+				+0.4
6,286,828	+				-1.1
6,286,828	+				-1.9
6,286,828	+				+0.9
6,286,828	+				-0.3
6,286,828	+				+1.7
6,286,828	+				+0.7
6,286,828	+				-1.0
6,286,828	+				+1.1
6,286,828	+				-0.0
6,286,828	+				+0.5
6,286,828	+				+0.6
6,286,828	+				-0.3
6,286,828	+				+0.6
6,286,828	+				+0.6
6,286,828	+				+0.5
6,286,829	-				+0.9
6,286,829	-				-0.1
6,286,829	-				-0.7
6,286,829	-				-0.8
6,286,829	-				-2.8
6,286,859	+				-0.2
6,286,859	+				-0.4
6,286,859	+				-0.9
6,286,860	-				-1.1
6,286,869	+				+0.7
6,286,869	+				-1.3
6,286,870	-				+0.6
6,286,870	-				+0.5
6,286,884	+				+1.1
6,286,910	-				-0.7
6,286,910	-				+0.1
6,286,910	-				-1.6
6,286,931	+				+1.6
6,286,931	+				-0.6
6,286,932	-				-1.1
6,286,937	+				+0.2
6,286,983	+				+2.1
6,286,983	+				-1.3
6,286,983	+				+0.7
6,286,984	-				+0.1
6,286,984	-				-0.1
6,286,984	-				-1.2
6,286,997	+				+0.9
6,286,998	-				+1.0
6,286,998	-				-0.1
6,286,998	-				-0.2
6,286,998	-				-1.1
6,286,998	-				-0.9
6,286,998	-				+0.2
6,287,022	+				+0.9
6,287,022	+				-1.8
6,287,022	+				-1.5
6,287,022	+				-0.9
6,287,023	-				-0.3
6,287,023	-				-0.2
6,287,023	-				-1.5
6,287,080	+		AO353_28910	0.26	+0.2
6,287,080	+		AO353_28910	0.26	-0.1
6,287,081	-		AO353_28910	0.26	+0.9
6,287,081	-		AO353_28910	0.26	-0.2
6,287,100	-				+1.5
6,287,171	+		AO353_28910	0.57	-0.3
6,287,171	+		AO353_28910	0.57	-0.5
6,287,172	-		AO353_28910	0.57	-0.8
6,287,200	-				+0.1
6,287,214	+		AO353_28910	0.71	+0.5
6,287,215	-		AO353_28910	0.72	-0.0
6,287,215	-		AO353_28910	0.72	-0.4
6,287,239	-		AO353_28910	0.80	+1.1
6,287,295	+				+0.8
6,287,296	-				+1.4
6,287,296	-				-0.6
6,287,303	+				+0.1
6,287,304	-				-1.5
6,287,304	-				-1.1
6,287,304	-				-0.5
6,287,308	+				-0.9
6,287,308	+				+0.3
6,287,308	+				-0.4
6,287,308	+				-0.4
6,287,309	-				-0.4
6,287,309	-				-1.1
6,287,312	+				-0.6
6,287,312	+				+0.1
6,287,312	+				-0.5
6,287,312	+				+0.2
6,287,312	+				+0.1
6,287,312	+				+0.8
6,287,312	+				+0.4
6,287,313	-				-0.2
6,287,313	-				-0.9
6,287,313	-				+0.5
6,287,613	+				+0.5
6,287,613	+				+0.5
6,287,614	-				+0.4
6,287,614	-				-0.8
6,287,629	+				+0.2
6,287,629	+				-1.5
6,287,629	+				+0.3
6,287,630	-				+1.5
6,287,630	-				-1.1
6,287,630	-				-0.9
6,287,652	+				-1.7
6,287,652	+				-0.2
6,287,652	+				+0.7
6,287,652	+				-0.6
6,287,653	-				-1.5
6,287,653	-				+0.6
6,287,653	-				-0.9
6,287,653	-				-0.0
6,287,672	-				-0.5
6,287,744	+		AO353_28915	0.17	-0.3
6,287,744	+		AO353_28915	0.17	+0.3
6,287,744	+		AO353_28915	0.17	-0.5
6,287,744	+		AO353_28915	0.17	-0.5
6,287,744	+		AO353_28915	0.17	+0.1
6,287,744	+		AO353_28915	0.17	+1.4
6,287,744	+		AO353_28915	0.17	+0.5
6,287,744	+		AO353_28915	0.17	+0.8
6,287,745	-		AO353_28915	0.18	-2.0
6,287,745	-		AO353_28915	0.18	-0.7
6,287,745	-		AO353_28915	0.18	-0.4
6,287,745	-		AO353_28915	0.18	-0.3
6,287,745	-		AO353_28915	0.18	+0.7
6,287,745	-		AO353_28915	0.18	+0.5
6,287,747	+		AO353_28915	0.18	-0.8
6,287,747	+		AO353_28915	0.18	-0.6
6,287,747	+		AO353_28915	0.18	+0.1
6,287,747	+		AO353_28915	0.18	-0.5
6,287,747	+		AO353_28915	0.18	+2.1
6,287,747	+		AO353_28915	0.18	-2.0
6,287,748	-		AO353_28915	0.18	+0.7
6,287,748	-		AO353_28915	0.18	-0.3
6,287,748	-		AO353_28915	0.18	-0.0
6,287,748	-		AO353_28915	0.18	+0.2
6,287,748	-		AO353_28915	0.18	+1.1
6,287,748	-		AO353_28915	0.18	-1.5