Experiment: sodium fluoride 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26930 and AO353_26935 are separated by 78 nucleotides AO353_26935 and AO353_26940 are separated by 132 nucleotides
AO353_26930: AO353_26930 - multidrug transporter, at 5,905,432 to 5,906,382
_26930
AO353_26935: AO353_26935 - LysR family transcriptional regulator, at 5,906,461 to 5,907,333
_26935
AO353_26940: AO353_26940 - diguanylate phosphodiesterase, at 5,907,466 to 5,909,001
_26940
Position (kb) 5906
5907
5908 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5905.470 kb on + strand at 5905.471 kb on - strand at 5905.481 kb on + strand at 5905.481 kb on + strand at 5905.481 kb on + strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.514 kb on + strand at 5905.514 kb on + strand at 5905.514 kb on + strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.558 kb on + strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.617 kb on + strand, within AO353_26930 at 5905.617 kb on + strand, within AO353_26930 at 5905.623 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.632 kb on - strand, within AO353_26930 at 5905.643 kb on + strand, within AO353_26930 at 5905.643 kb on + strand, within AO353_26930 at 5905.644 kb on - strand, within AO353_26930 at 5905.644 kb on - strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.674 kb on - strand, within AO353_26930 at 5905.674 kb on - strand, within AO353_26930 at 5905.785 kb on - strand, within AO353_26930 at 5905.795 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.082 kb on - strand, within AO353_26930 at 5906.082 kb on - strand, within AO353_26930 at 5906.093 kb on + strand, within AO353_26930 at 5906.111 kb on + strand, within AO353_26930 at 5906.111 kb on + strand, within AO353_26930 at 5906.112 kb on - strand, within AO353_26930 at 5906.199 kb on + strand, within AO353_26930 at 5906.199 kb on + strand, within AO353_26930 at 5906.200 kb on - strand, within AO353_26930 at 5906.200 kb on - strand, within AO353_26930 at 5906.200 kb on - strand, within AO353_26930 at 5906.206 kb on + strand, within AO353_26930 at 5906.206 kb on + strand, within AO353_26930 at 5906.207 kb on - strand, within AO353_26930 at 5906.251 kb on + strand, within AO353_26930 at 5906.252 kb on - strand, within AO353_26930 at 5906.333 kb on + strand at 5906.407 kb on + strand at 5906.407 kb on + strand at 5906.407 kb on + strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.411 kb on + strand at 5906.412 kb on - strand at 5906.444 kb on - strand at 5906.453 kb on - strand at 5906.801 kb on - strand, within AO353_26935 at 5906.813 kb on - strand, within AO353_26935 at 5906.970 kb on + strand, within AO353_26935 at 5907.225 kb on + strand, within AO353_26935 at 5907.225 kb on + strand, within AO353_26935 at 5907.300 kb on + strand at 5907.301 kb on - strand at 5907.314 kb on + strand at 5907.314 kb on + strand at 5907.314 kb on + strand at 5907.350 kb on - strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.425 kb on - strand at 5907.425 kb on - strand at 5907.442 kb on - strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.543 kb on - strand at 5907.543 kb on - strand at 5907.545 kb on + strand at 5907.545 kb on + strand at 5907.546 kb on - strand at 5907.546 kb on - strand at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.798 kb on - strand, within AO353_26940 at 5907.798 kb on - strand, within AO353_26940 at 5907.808 kb on + strand, within AO353_26940 at 5907.809 kb on - strand, within AO353_26940 at 5907.809 kb on - strand, within AO353_26940 at 5907.836 kb on - strand, within AO353_26940 at 5907.901 kb on + strand, within AO353_26940 at 5907.901 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.993 kb on - strand, within AO353_26940 at 5907.998 kb on + strand, within AO353_26940 at 5907.999 kb on - strand, within AO353_26940 at 5907.999 kb on - strand, within AO353_26940 at 5908.022 kb on + strand, within AO353_26940 at 5908.023 kb on - strand, within AO353_26940 at 5908.023 kb on - strand, within AO353_26940 at 5908.026 kb on + strand, within AO353_26940 at 5908.026 kb on + strand, within AO353_26940 at 5908.062 kb on - strand, within AO353_26940 at 5908.100 kb on - strand, within AO353_26940 at 5908.112 kb on + strand, within AO353_26940 at 5908.112 kb on + strand, within AO353_26940 at 5908.112 kb on + strand, within AO353_26940 at 5908.147 kb on + strand, within AO353_26940 at 5908.147 kb on + strand, within AO353_26940 at 5908.148 kb on - strand, within AO353_26940 at 5908.226 kb on + strand, within AO353_26940 at 5908.294 kb on + strand, within AO353_26940 at 5908.294 kb on + strand, within AO353_26940 at 5908.294 kb on + strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 6.25 mM remove 5,905,470 + -0.3 5,905,471 - +0.2 5,905,481 + -0.2 5,905,481 + +0.3 5,905,481 + -0.3 5,905,482 - -0.8 5,905,482 - +0.1 5,905,482 - +0.1 5,905,482 - -0.9 5,905,482 - +0.5 5,905,482 - -1.1 5,905,514 + -0.0 5,905,514 + +0.1 5,905,514 + -1.0 5,905,515 - +0.4 5,905,515 - +0.9 5,905,515 - -0.2 5,905,515 - -0.9 5,905,515 - +0.0 5,905,515 - -0.0 5,905,515 - -1.7 5,905,515 - -0.0 5,905,515 - -0.2 5,905,558 + AO353_26930 0.13 -1.3 5,905,559 - AO353_26930 0.13 +1.2 5,905,559 - AO353_26930 0.13 -0.7 5,905,559 - AO353_26930 0.13 -1.2 5,905,559 - AO353_26930 0.13 +0.8 5,905,617 + AO353_26930 0.19 -1.8 5,905,617 + AO353_26930 0.19 -0.7 5,905,623 + AO353_26930 0.20 -0.6 5,905,631 + AO353_26930 0.21 +2.4 5,905,631 + AO353_26930 0.21 -0.5 5,905,631 + AO353_26930 0.21 +1.7 5,905,631 + AO353_26930 0.21 +0.6 5,905,631 + AO353_26930 0.21 +0.3 5,905,632 - AO353_26930 0.21 -0.6 5,905,643 + AO353_26930 0.22 -1.0 5,905,643 + AO353_26930 0.22 +0.1 5,905,644 - AO353_26930 0.22 +0.6 5,905,644 - AO353_26930 0.22 -0.1 5,905,673 + AO353_26930 0.25 -0.0 5,905,673 + AO353_26930 0.25 -0.1 5,905,673 + AO353_26930 0.25 -0.3 5,905,674 - AO353_26930 0.25 -2.4 5,905,674 - AO353_26930 0.25 +0.3 5,905,785 - AO353_26930 0.37 +0.7 5,905,795 - AO353_26930 0.38 -2.2 5,905,842 - AO353_26930 0.43 +0.5 5,905,842 - AO353_26930 0.43 -0.0 5,905,842 - AO353_26930 0.43 -1.5 5,906,081 + AO353_26930 0.68 -0.0 5,906,081 + AO353_26930 0.68 +0.4 5,906,081 + AO353_26930 0.68 +1.1 5,906,081 + AO353_26930 0.68 -0.3 5,906,081 + AO353_26930 0.68 -0.4 5,906,082 - AO353_26930 0.68 +0.4 5,906,082 - AO353_26930 0.68 +0.6 5,906,093 + AO353_26930 0.70 -0.6 5,906,111 + AO353_26930 0.71 +0.8 5,906,111 + AO353_26930 0.71 -0.0 5,906,112 - AO353_26930 0.72 +0.5 5,906,199 + AO353_26930 0.81 -0.1 5,906,199 + AO353_26930 0.81 +0.2 5,906,200 - AO353_26930 0.81 +1.0 5,906,200 - AO353_26930 0.81 -0.6 5,906,200 - AO353_26930 0.81 -0.7 5,906,206 + AO353_26930 0.81 -0.4 5,906,206 + AO353_26930 0.81 -1.0 5,906,207 - AO353_26930 0.81 -0.3 5,906,251 + AO353_26930 0.86 -1.6 5,906,252 - AO353_26930 0.86 +0.4 5,906,333 + -2.0 5,906,407 + -0.8 5,906,407 + -1.9 5,906,407 + +0.2 5,906,408 - -0.0 5,906,408 - -0.8 5,906,408 - -1.3 5,906,408 - -0.2 5,906,408 - -0.3 5,906,408 - -1.0 5,906,411 + +0.5 5,906,412 - -1.0 5,906,444 - -0.0 5,906,453 - -2.1 5,906,801 - AO353_26935 0.39 -1.0 5,906,813 - AO353_26935 0.40 -0.3 5,906,970 + AO353_26935 0.58 -0.2 5,907,225 + AO353_26935 0.88 +0.4 5,907,225 + AO353_26935 0.88 -0.8 5,907,300 + -0.2 5,907,301 - -0.2 5,907,314 + +0.8 5,907,314 + -1.0 5,907,314 + +1.1 5,907,350 - +0.6 5,907,358 + +0.7 5,907,358 + -0.7 5,907,358 + +0.4 5,907,358 + +1.6 5,907,358 + -0.5 5,907,358 + -0.1 5,907,358 + -0.9 5,907,358 + -0.7 5,907,358 + -0.6 5,907,358 + +0.8 5,907,358 + -1.6 5,907,358 + +2.0 5,907,359 - -1.2 5,907,359 - -1.2 5,907,359 - +1.0 5,907,359 - -0.6 5,907,359 - -1.5 5,907,359 - -1.3 5,907,359 - -0.1 5,907,359 - -0.3 5,907,359 - -2.1 5,907,359 - +0.4 5,907,359 - +0.2 5,907,359 - +1.1 5,907,359 - -1.0 5,907,425 - -0.0 5,907,425 - -0.8 5,907,442 - -1.2 5,907,542 + -0.3 5,907,542 + -1.2 5,907,542 + -1.0 5,907,542 + +0.2 5,907,542 + +1.0 5,907,542 + -0.5 5,907,543 - -0.3 5,907,543 - -0.7 5,907,545 + +0.4 5,907,545 + +0.2 5,907,546 - +0.8 5,907,546 - -0.2 5,907,782 + AO353_26940 0.21 +0.4 5,907,782 + AO353_26940 0.21 -0.8 5,907,782 + AO353_26940 0.21 +0.4 5,907,782 + AO353_26940 0.21 -0.2 5,907,782 + AO353_26940 0.21 +0.8 5,907,782 + AO353_26940 0.21 +0.6 5,907,782 + AO353_26940 0.21 +0.2 5,907,782 + AO353_26940 0.21 -1.3 5,907,782 + AO353_26940 0.21 -1.3 5,907,782 + AO353_26940 0.21 -0.1 5,907,782 + AO353_26940 0.21 +0.2 5,907,782 + AO353_26940 0.21 -1.0 5,907,782 + AO353_26940 0.21 +1.0 5,907,782 + AO353_26940 0.21 +0.3 5,907,783 - AO353_26940 0.21 -0.0 5,907,783 - AO353_26940 0.21 +0.7 5,907,783 - AO353_26940 0.21 -0.1 5,907,783 - AO353_26940 0.21 +1.5 5,907,783 - AO353_26940 0.21 +0.8 5,907,783 - AO353_26940 0.21 +1.3 5,907,783 - AO353_26940 0.21 -1.1 5,907,783 - AO353_26940 0.21 +0.2 5,907,783 - AO353_26940 0.21 +0.5 5,907,783 - AO353_26940 0.21 +0.4 5,907,783 - AO353_26940 0.21 +0.4 5,907,783 - AO353_26940 0.21 +1.2 5,907,783 - AO353_26940 0.21 -0.8 5,907,783 - AO353_26940 0.21 -0.6 5,907,783 - AO353_26940 0.21 -0.4 5,907,783 - AO353_26940 0.21 +1.5 5,907,783 - AO353_26940 0.21 +0.2 5,907,783 - AO353_26940 0.21 -1.2 5,907,783 - AO353_26940 0.21 -2.2 5,907,783 - AO353_26940 0.21 -1.3 5,907,783 - AO353_26940 0.21 -2.5 5,907,783 - +1.0 5,907,783 - AO353_26940 0.21 +0.2 5,907,783 - AO353_26940 0.21 +1.1 5,907,784 + AO353_26940 0.21 +0.9 5,907,784 + AO353_26940 0.21 +0.2 5,907,784 + AO353_26940 0.21 -0.2 5,907,784 + AO353_26940 0.21 -1.6 5,907,784 + AO353_26940 0.21 -1.7 5,907,784 + AO353_26940 0.21 -0.8 5,907,784 + AO353_26940 0.21 -1.5 5,907,784 + AO353_26940 0.21 -0.2 5,907,785 - AO353_26940 0.21 -0.5 5,907,785 - AO353_26940 0.21 -0.3 5,907,785 - AO353_26940 0.21 +0.2 5,907,785 - AO353_26940 0.21 -0.7 5,907,785 - AO353_26940 0.21 -0.2 5,907,785 - AO353_26940 0.21 -1.1 5,907,785 - AO353_26940 0.21 -0.8 5,907,785 - AO353_26940 0.21 -1.0 5,907,785 - AO353_26940 0.21 +0.4 5,907,785 - AO353_26940 0.21 -0.8 5,907,785 - AO353_26940 0.21 +0.5 5,907,785 - AO353_26940 0.21 -0.3 5,907,785 - AO353_26940 0.21 -0.3 5,907,785 - AO353_26940 0.21 -0.1 5,907,785 - AO353_26940 0.21 -0.6 5,907,785 - AO353_26940 0.21 +0.6 5,907,785 - AO353_26940 0.21 -0.5 5,907,785 - AO353_26940 0.21 -0.8 5,907,797 + AO353_26940 0.22 -0.6 5,907,797 + AO353_26940 0.22 +0.1 5,907,797 + AO353_26940 0.22 -0.0 5,907,797 + AO353_26940 0.22 +0.5 5,907,798 - AO353_26940 0.22 +0.3 5,907,798 - AO353_26940 0.22 -0.1 5,907,808 + AO353_26940 0.22 -0.8 5,907,809 - AO353_26940 0.22 +1.2 5,907,809 - AO353_26940 0.22 -0.0 5,907,836 - AO353_26940 0.24 +0.3 5,907,901 + AO353_26940 0.28 +0.2 5,907,901 + AO353_26940 0.28 -1.3 5,907,992 + AO353_26940 0.34 -0.2 5,907,992 + AO353_26940 0.34 +0.4 5,907,992 + AO353_26940 0.34 +1.0 5,907,992 + AO353_26940 0.34 +0.6 5,907,993 - AO353_26940 0.34 +1.0 5,907,998 + AO353_26940 0.35 -0.0 5,907,999 - AO353_26940 0.35 -0.3 5,907,999 - AO353_26940 0.35 +0.3 5,908,022 + AO353_26940 0.36 +0.1 5,908,023 - AO353_26940 0.36 +1.0 5,908,023 - AO353_26940 0.36 -0.3 5,908,026 + AO353_26940 0.36 +0.2 5,908,026 + AO353_26940 0.36 -1.8 5,908,062 - AO353_26940 0.39 +0.5 5,908,100 - AO353_26940 0.41 -0.2 5,908,112 + AO353_26940 0.42 +1.6 5,908,112 + AO353_26940 0.42 +1.0 5,908,112 + AO353_26940 0.42 -1.2 5,908,147 + AO353_26940 0.44 +0.1 5,908,147 + AO353_26940 0.44 -0.2 5,908,148 - AO353_26940 0.44 +0.4 5,908,226 + AO353_26940 0.49 -1.1 5,908,294 + AO353_26940 0.54 +0.4 5,908,294 + AO353_26940 0.54 -0.4 5,908,294 + AO353_26940 0.54 +0.8 5,908,295 - AO353_26940 0.54 -0.0 5,908,295 - AO353_26940 0.54 +0.5 5,908,295 - AO353_26940 0.54 +1.8 5,908,295 - AO353_26940 0.54 +1.0 5,908,295 - AO353_26940 0.54 -2.3
Or see this region's nucleotide sequence