Experiment: sodium fluoride 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24630 and AO353_24635 are separated by 585 nucleotides AO353_24635 and AO353_24640 are separated by 521 nucleotides AO353_24640 and AO353_24645 are separated by 1 nucleotides
AO353_24630: AO353_24630 - hypothetical protein, at 5,420,066 to 5,420,500
_24630
AO353_24635: AO353_24635 - hypothetical protein, at 5,421,086 to 5,421,400
_24635
AO353_24640: AO353_24640 - hypothetical protein, at 5,421,922 to 5,422,335
_24640
AO353_24645: AO353_24645 - hypothetical protein, at 5,422,337 to 5,424,217
_24645
Position (kb) 5421
5422 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5420.100 kb on - strand at 5420.137 kb on - strand, within AO353_24630 at 5420.186 kb on + strand, within AO353_24630 at 5420.187 kb on - strand, within AO353_24630 at 5420.213 kb on + strand, within AO353_24630 at 5420.271 kb on + strand, within AO353_24630 at 5420.271 kb on + strand, within AO353_24630 at 5420.272 kb on - strand, within AO353_24630 at 5420.272 kb on - strand, within AO353_24630 at 5420.272 kb on - strand, within AO353_24630 at 5420.272 kb on - strand, within AO353_24630 at 5420.325 kb on + strand, within AO353_24630 at 5420.326 kb on - strand, within AO353_24630 at 5420.326 kb on - strand, within AO353_24630 at 5420.331 kb on + strand, within AO353_24630 at 5420.331 kb on + strand, within AO353_24630 at 5420.332 kb on - strand, within AO353_24630 at 5420.332 kb on - strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.363 kb on + strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.364 kb on - strand, within AO353_24630 at 5420.366 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.407 kb on + strand, within AO353_24630 at 5420.408 kb on - strand, within AO353_24630 at 5420.408 kb on - strand, within AO353_24630 at 5420.433 kb on - strand, within AO353_24630 at 5420.433 kb on - strand, within AO353_24630 at 5420.433 kb on - strand, within AO353_24630 at 5420.436 kb on + strand, within AO353_24630 at 5420.436 kb on + strand, within AO353_24630 at 5420.436 kb on + strand, within AO353_24630 at 5420.437 kb on - strand, within AO353_24630 at 5420.459 kb on + strand at 5420.459 kb on + strand at 5420.459 kb on + strand at 5420.459 kb on + strand at 5420.460 kb on - strand at 5420.460 kb on - strand at 5420.460 kb on - strand at 5420.460 kb on - strand at 5420.480 kb on - strand at 5420.522 kb on + strand at 5420.522 kb on + strand at 5420.548 kb on + strand at 5420.548 kb on + strand at 5420.548 kb on + strand at 5420.548 kb on + strand at 5420.549 kb on - strand at 5420.549 kb on - strand at 5420.549 kb on - strand at 5420.549 kb on - strand at 5420.549 kb on - strand at 5420.579 kb on + strand at 5420.580 kb on - strand at 5420.580 kb on - strand at 5420.613 kb on + strand at 5420.613 kb on + strand at 5420.614 kb on - strand at 5420.614 kb on - strand at 5420.633 kb on + strand at 5420.634 kb on - strand at 5420.634 kb on - strand at 5420.634 kb on - strand at 5420.698 kb on + strand at 5420.741 kb on + strand at 5420.741 kb on + strand at 5420.755 kb on - strand at 5420.789 kb on - strand at 5420.817 kb on + strand at 5420.817 kb on + strand at 5420.817 kb on + strand at 5420.817 kb on + strand at 5420.817 kb on + strand at 5420.818 kb on - strand at 5420.818 kb on - strand at 5420.818 kb on - strand at 5420.826 kb on + strand at 5420.826 kb on + strand at 5420.827 kb on - strand at 5420.840 kb on + strand at 5420.840 kb on + strand at 5420.840 kb on + strand at 5420.840 kb on + strand at 5420.840 kb on + strand at 5420.841 kb on - strand at 5420.841 kb on - strand at 5420.841 kb on - strand at 5420.851 kb on + strand at 5420.851 kb on + strand at 5420.852 kb on - strand at 5420.855 kb on - strand at 5420.855 kb on - strand at 5420.855 kb on - strand at 5420.875 kb on - strand at 5420.919 kb on + strand at 5420.974 kb on + strand at 5420.974 kb on + strand at 5420.974 kb on + strand at 5420.975 kb on - strand at 5420.975 kb on - strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.020 kb on - strand at 5421.020 kb on - strand at 5421.213 kb on + strand, within AO353_24635 at 5421.213 kb on + strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.319 kb on + strand, within AO353_24635 at 5421.321 kb on + strand at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.322 kb on - strand, within AO353_24635 at 5421.322 kb on - strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.349 kb on - strand, within AO353_24635 at 5421.349 kb on - strand, within AO353_24635 at 5421.411 kb on - strand at 5421.472 kb on - strand at 5421.477 kb on + strand at 5421.478 kb on - strand at 5421.478 kb on - strand at 5421.480 kb on + strand at 5421.480 kb on + strand at 5421.584 kb on + strand at 5421.584 kb on + strand at 5421.585 kb on - strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.588 kb on - strand at 5421.588 kb on - strand at 5421.617 kb on + strand at 5421.618 kb on - strand at 5421.678 kb on - strand at 5421.678 kb on - strand at 5421.678 kb on - strand at 5421.725 kb on + strand at 5421.726 kb on - strand at 5421.726 kb on - strand at 5421.726 kb on - strand at 5421.776 kb on + strand at 5421.776 kb on + strand at 5421.776 kb on + strand at 5421.777 kb on - strand at 5421.777 kb on - strand at 5421.799 kb on + strand at 5421.799 kb on + strand at 5421.799 kb on + strand at 5421.800 kb on - strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.829 kb on - strand at 5421.829 kb on - strand at 5421.829 kb on - strand at 5421.832 kb on + strand at 5421.832 kb on + strand at 5421.832 kb on + strand at 5421.833 kb on - strand at 5421.833 kb on - strand at 5421.899 kb on + strand at 5421.899 kb on + strand at 5421.982 kb on + strand, within AO353_24640 at 5421.982 kb on + strand, within AO353_24640 at 5421.982 kb on + strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.993 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 6.25 mM remove 5,420,100 - +0.4 5,420,137 - AO353_24630 0.16 +0.2 5,420,186 + AO353_24630 0.28 -0.0 5,420,187 - AO353_24630 0.28 -2.3 5,420,213 + AO353_24630 0.34 +0.0 5,420,271 + AO353_24630 0.47 -0.0 5,420,271 + AO353_24630 0.47 +0.2 5,420,272 - AO353_24630 0.47 -0.7 5,420,272 - AO353_24630 0.47 +0.0 5,420,272 - AO353_24630 0.47 -0.4 5,420,272 - AO353_24630 0.47 +0.7 5,420,325 + AO353_24630 0.60 +0.5 5,420,326 - AO353_24630 0.60 -1.7 5,420,326 - AO353_24630 0.60 +0.7 5,420,331 + AO353_24630 0.61 -1.3 5,420,331 + AO353_24630 0.61 -1.6 5,420,332 - AO353_24630 0.61 -0.4 5,420,332 - AO353_24630 0.61 -0.7 5,420,363 + AO353_24630 0.68 -0.1 5,420,363 + AO353_24630 0.68 +1.7 5,420,363 + AO353_24630 0.68 +0.5 5,420,363 + AO353_24630 0.68 -1.1 5,420,363 + AO353_24630 0.68 +0.5 5,420,363 + AO353_24630 0.68 +0.2 5,420,363 + AO353_24630 0.68 -0.9 5,420,363 + AO353_24630 0.68 +0.1 5,420,363 + AO353_24630 0.68 +0.1 5,420,364 - AO353_24630 0.69 -1.3 5,420,364 - AO353_24630 0.69 -1.6 5,420,364 - AO353_24630 0.69 -0.9 5,420,364 - AO353_24630 0.69 -0.4 5,420,364 - AO353_24630 0.69 +0.2 5,420,364 - AO353_24630 0.69 -1.1 5,420,364 - AO353_24630 0.69 -0.2 5,420,364 - AO353_24630 0.69 -1.3 5,420,364 - AO353_24630 0.69 -0.5 5,420,364 - AO353_24630 0.69 +0.3 5,420,364 - AO353_24630 0.69 +0.5 5,420,366 + AO353_24630 0.69 +0.7 5,420,407 + AO353_24630 0.78 +0.1 5,420,407 + AO353_24630 0.78 -0.8 5,420,407 + AO353_24630 0.78 +0.2 5,420,407 + AO353_24630 0.78 -0.3 5,420,407 + AO353_24630 0.78 -1.2 5,420,407 + AO353_24630 0.78 -0.3 5,420,407 + AO353_24630 0.78 -0.4 5,420,407 + AO353_24630 0.78 -1.3 5,420,408 - AO353_24630 0.79 -0.9 5,420,408 - AO353_24630 0.79 -0.7 5,420,433 - AO353_24630 0.84 +0.8 5,420,433 - AO353_24630 0.84 +0.9 5,420,433 - AO353_24630 0.84 -0.3 5,420,436 + AO353_24630 0.85 -0.0 5,420,436 + AO353_24630 0.85 +0.5 5,420,436 + AO353_24630 0.85 -0.0 5,420,437 - AO353_24630 0.85 -0.9 5,420,459 + -1.3 5,420,459 + -1.6 5,420,459 + -1.0 5,420,459 + +1.9 5,420,460 - +0.4 5,420,460 - -0.4 5,420,460 - +0.5 5,420,460 - +1.3 5,420,480 - -0.2 5,420,522 + -0.9 5,420,522 + -1.1 5,420,548 + +0.0 5,420,548 + -0.1 5,420,548 + +1.7 5,420,548 + +1.2 5,420,549 - -0.9 5,420,549 - -2.3 5,420,549 - +0.9 5,420,549 - -0.1 5,420,549 - -0.1 5,420,579 + -0.1 5,420,580 - -1.7 5,420,580 - +1.1 5,420,613 + -0.9 5,420,613 + -0.4 5,420,614 - +1.0 5,420,614 - +1.2 5,420,633 + +0.7 5,420,634 - +0.6 5,420,634 - +0.0 5,420,634 - +0.2 5,420,698 + -1.9 5,420,741 + -0.9 5,420,741 + +0.2 5,420,755 - -0.7 5,420,789 - +1.1 5,420,817 + -0.6 5,420,817 + -1.3 5,420,817 + +1.0 5,420,817 + -0.9 5,420,817 + +0.1 5,420,818 - +0.8 5,420,818 - -2.0 5,420,818 - +1.9 5,420,826 + -0.1 5,420,826 + +0.0 5,420,827 - +0.5 5,420,840 + +0.6 5,420,840 + -0.7 5,420,840 + -0.5 5,420,840 + +0.4 5,420,840 + -1.4 5,420,841 - -0.1 5,420,841 - +1.6 5,420,841 - -1.0 5,420,851 + -1.9 5,420,851 + -1.3 5,420,852 - +0.3 5,420,855 - +0.7 5,420,855 - +0.7 5,420,855 - -0.4 5,420,875 - -0.3 5,420,919 + +0.4 5,420,974 + +0.1 5,420,974 + -0.1 5,420,974 + -0.7 5,420,975 - -1.0 5,420,975 - -0.8 5,421,019 + +0.5 5,421,019 + +1.3 5,421,019 + +1.3 5,421,019 + +0.9 5,421,019 + +0.8 5,421,019 + -1.6 5,421,020 - -0.3 5,421,020 - -2.6 5,421,213 + AO353_24635 0.40 -2.2 5,421,213 + AO353_24635 0.40 -0.6 5,421,214 - AO353_24635 0.41 -1.1 5,421,214 - AO353_24635 0.41 -0.2 5,421,214 - AO353_24635 0.41 +0.4 5,421,214 - AO353_24635 0.41 -0.6 5,421,319 + AO353_24635 0.74 -0.4 5,421,321 + +1.2 5,421,321 + AO353_24635 0.75 +0.3 5,421,321 + AO353_24635 0.75 -1.1 5,421,321 + AO353_24635 0.75 +0.2 5,421,321 + AO353_24635 0.75 -0.7 5,421,321 + AO353_24635 0.75 -1.3 5,421,322 - AO353_24635 0.75 -0.6 5,421,322 - AO353_24635 0.75 +0.3 5,421,348 + AO353_24635 0.83 +0.4 5,421,348 + AO353_24635 0.83 +0.4 5,421,348 + AO353_24635 0.83 +0.4 5,421,349 - AO353_24635 0.83 +0.0 5,421,349 - AO353_24635 0.83 -0.3 5,421,411 - -2.2 5,421,472 - -0.2 5,421,477 + +2.9 5,421,478 - -2.2 5,421,478 - +0.1 5,421,480 + -0.0 5,421,480 + +0.7 5,421,584 + -0.4 5,421,584 + -0.0 5,421,585 - -1.2 5,421,587 + +0.3 5,421,587 + +0.4 5,421,587 + +0.3 5,421,587 + +0.6 5,421,587 + +0.6 5,421,587 + +0.9 5,421,588 - -1.4 5,421,588 - +0.4 5,421,617 + -0.4 5,421,618 - +0.7 5,421,678 - -0.5 5,421,678 - +1.0 5,421,678 - +0.4 5,421,725 + -1.1 5,421,726 - +1.0 5,421,726 - -0.7 5,421,726 - +0.9 5,421,776 + +1.6 5,421,776 + +0.2 5,421,776 + +0.1 5,421,777 - +2.2 5,421,777 - -0.1 5,421,799 + -0.7 5,421,799 + -0.3 5,421,799 + +1.9 5,421,800 - -0.4 5,421,828 + -1.5 5,421,828 + -0.9 5,421,828 + +0.5 5,421,828 + +1.2 5,421,828 + +0.7 5,421,828 + +0.9 5,421,829 - +1.2 5,421,829 - +0.5 5,421,829 - -1.6 5,421,832 + -0.1 5,421,832 + +0.2 5,421,832 + -2.5 5,421,833 - +0.4 5,421,833 - -0.6 5,421,899 + -1.1 5,421,899 + -0.6 5,421,982 + AO353_24640 0.14 -0.8 5,421,982 + AO353_24640 0.14 +0.3 5,421,982 + AO353_24640 0.14 -2.3 5,421,983 - AO353_24640 0.15 +0.6 5,421,983 - AO353_24640 0.15 +0.2 5,421,983 - AO353_24640 0.15 -1.6 5,421,983 - AO353_24640 0.15 -1.3 5,421,993 + AO353_24640 0.17 -0.1 5,422,163 + AO353_24640 0.58 -1.6 5,422,163 + AO353_24640 0.58 -1.7 5,422,163 + AO353_24640 0.58 +0.2 5,422,163 + AO353_24640 0.58 +0.4 5,422,163 + AO353_24640 0.58 -0.9 5,422,163 + AO353_24640 0.58 -1.3 5,422,163 + AO353_24640 0.58 -0.1 5,422,164 - AO353_24640 0.58 -1.1 5,422,164 - AO353_24640 0.58 +1.3 5,422,164 - AO353_24640 0.58 -0.3 5,422,164 - AO353_24640 0.58 -1.1 5,422,386 + +0.2 5,422,386 + -0.6 5,422,386 + -1.3 5,422,386 + +1.6 5,422,386 + +0.2 5,422,386 + +0.7 5,422,387 - +1.3 5,422,387 - +0.4 5,422,387 - -1.3 5,422,387 - -1.0 5,422,387 - +0.7 5,422,387 - +1.4 5,422,387 - -0.1
Or see this region's nucleotide sequence