Experiment: sodium fluoride 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14940 and AO353_14945 are separated by 751 nucleotides AO353_14945 and AO353_14950 are separated by 182 nucleotides
AO353_14940: AO353_14940 - malate:quinone oxidoreductase, at 3,303,018 to 3,304,526
_14940
AO353_14945: AO353_14945 - hypothetical protein, at 3,305,278 to 3,305,502
_14945
AO353_14950: AO353_14950 - hypothetical protein, at 3,305,685 to 3,306,269
_14950
Position (kb)
3305
3306 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3304.459 kb on - strand at 3304.459 kb on - strand at 3304.497 kb on + strand at 3304.498 kb on - strand at 3304.500 kb on + strand at 3304.500 kb on + strand at 3304.500 kb on + strand at 3304.567 kb on + strand at 3304.568 kb on - strand at 3304.568 kb on - strand at 3304.598 kb on - strand at 3304.672 kb on - strand at 3304.672 kb on - strand at 3304.675 kb on + strand at 3304.675 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.694 kb on - strand at 3304.694 kb on - strand at 3304.694 kb on - strand at 3304.694 kb on - strand at 3304.730 kb on + strand at 3304.730 kb on + strand at 3304.730 kb on + strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.740 kb on - strand at 3304.740 kb on - strand at 3304.740 kb on - strand at 3304.740 kb on - strand at 3304.801 kb on - strand at 3304.801 kb on - strand at 3304.828 kb on + strand at 3304.829 kb on - strand at 3304.829 kb on - strand at 3304.829 kb on - strand at 3304.836 kb on - strand at 3304.845 kb on + strand at 3304.846 kb on - strand at 3304.846 kb on - strand at 3304.846 kb on - strand at 3304.861 kb on + strand at 3304.992 kb on - strand at 3305.149 kb on + strand at 3305.149 kb on + strand at 3305.149 kb on + strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.195 kb on + strand at 3305.195 kb on + strand at 3305.195 kb on + strand at 3305.196 kb on - strand at 3305.196 kb on - strand at 3305.196 kb on - strand at 3305.197 kb on + strand at 3305.197 kb on + strand at 3305.197 kb on + strand at 3305.197 kb on + strand at 3305.198 kb on - strand at 3305.215 kb on - strand at 3305.246 kb on - strand at 3305.255 kb on + strand at 3305.256 kb on - strand at 3305.256 kb on - strand at 3305.256 kb on - strand at 3305.279 kb on + strand at 3305.456 kb on + strand, within AO353_14945 at 3305.462 kb on + strand, within AO353_14945 at 3305.462 kb on + strand, within AO353_14945 at 3305.463 kb on - strand, within AO353_14945 at 3305.463 kb on - strand, within AO353_14945 at 3305.537 kb on - strand at 3305.576 kb on - strand at 3305.591 kb on + strand at 3305.591 kb on + strand at 3305.591 kb on + strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.643 kb on + strand at 3305.643 kb on + strand at 3305.644 kb on - strand at 3305.644 kb on - strand at 3305.645 kb on + strand at 3305.645 kb on + strand at 3305.645 kb on + strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.668 kb on + strand at 3305.668 kb on + strand at 3305.669 kb on - strand at 3305.679 kb on + strand at 3305.680 kb on - strand at 3305.764 kb on + strand, within AO353_14950 at 3305.764 kb on + strand, within AO353_14950 at 3305.765 kb on - strand, within AO353_14950 at 3305.985 kb on - strand, within AO353_14950 at 3305.985 kb on - strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.075 kb on - strand, within AO353_14950 at 3306.075 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.355 kb on - strand at 3306.396 kb on + strand at 3306.402 kb on + strand at 3306.402 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 6.25 mM remove 3,304,459 - +0.0 3,304,459 - -2.2 3,304,497 + +1.2 3,304,498 - -0.8 3,304,500 + +0.1 3,304,500 + +1.0 3,304,500 + -0.4 3,304,567 + -0.1 3,304,568 - -0.7 3,304,568 - -0.6 3,304,598 - +0.5 3,304,672 - -0.3 3,304,672 - +1.4 3,304,675 + +0.8 3,304,675 + -0.7 3,304,693 + +0.1 3,304,693 + -0.4 3,304,693 + -1.5 3,304,693 + -0.1 3,304,693 + -0.1 3,304,694 - -0.1 3,304,694 - -0.6 3,304,694 - -0.1 3,304,694 - +1.3 3,304,730 + -0.1 3,304,730 + -0.8 3,304,730 + -1.1 3,304,731 - -1.4 3,304,731 - -1.8 3,304,731 - +0.5 3,304,731 - +0.8 3,304,731 - -0.8 3,304,740 - +0.1 3,304,740 - -0.5 3,304,740 - -1.1 3,304,740 - +0.1 3,304,801 - -0.8 3,304,801 - +0.3 3,304,828 + +0.4 3,304,829 - -2.2 3,304,829 - +0.2 3,304,829 - -1.1 3,304,836 - -1.5 3,304,845 + -1.1 3,304,846 - +1.3 3,304,846 - +0.2 3,304,846 - +0.3 3,304,861 + +1.5 3,304,992 - -0.0 3,305,149 + +0.3 3,305,149 + +0.2 3,305,149 + -0.1 3,305,150 - +0.2 3,305,150 - -1.5 3,305,150 - -1.0 3,305,150 - +0.2 3,305,150 - +0.4 3,305,150 - +0.2 3,305,150 - +1.1 3,305,150 - +0.3 3,305,195 + -0.2 3,305,195 + -1.0 3,305,195 + +0.9 3,305,196 - -0.5 3,305,196 - -1.1 3,305,196 - -1.8 3,305,197 + -0.0 3,305,197 + -2.2 3,305,197 + +0.3 3,305,197 + -0.7 3,305,198 - +0.3 3,305,215 - -0.4 3,305,246 - +0.5 3,305,255 + -0.3 3,305,256 - +0.2 3,305,256 - -1.2 3,305,256 - +0.5 3,305,279 + -0.9 3,305,456 + AO353_14945 0.79 +0.2 3,305,462 + AO353_14945 0.82 -1.3 3,305,462 + AO353_14945 0.82 -1.2 3,305,463 - AO353_14945 0.82 -1.5 3,305,463 - AO353_14945 0.82 -0.3 3,305,537 - -0.1 3,305,576 - -1.1 3,305,591 + +2.2 3,305,591 + -0.3 3,305,591 + +0.2 3,305,592 - +0.0 3,305,592 - +1.9 3,305,592 - -0.2 3,305,592 - +0.1 3,305,592 - -1.7 3,305,592 - -0.8 3,305,592 - -0.2 3,305,592 - +0.3 3,305,592 - +0.6 3,305,643 + -0.8 3,305,643 + +1.4 3,305,644 - -0.6 3,305,644 - -0.1 3,305,645 + -1.2 3,305,645 + -0.2 3,305,645 + +0.2 3,305,646 - -0.5 3,305,646 - -0.7 3,305,646 - -1.5 3,305,646 - +0.2 3,305,646 - -1.3 3,305,662 + +1.1 3,305,662 + -0.7 3,305,662 + +0.4 3,305,662 + +1.0 3,305,662 + -1.2 3,305,663 - -0.5 3,305,663 - -0.7 3,305,663 - -0.1 3,305,663 - -0.3 3,305,663 - -0.0 3,305,668 + -0.7 3,305,668 + -0.0 3,305,669 - +2.3 3,305,679 + -0.1 3,305,680 - +1.2 3,305,764 + AO353_14950 0.14 -0.8 3,305,764 + AO353_14950 0.14 -0.5 3,305,765 - AO353_14950 0.14 -0.3 3,305,985 - AO353_14950 0.51 +0.2 3,305,985 - AO353_14950 0.51 -1.1 3,305,991 + AO353_14950 0.52 +0.6 3,305,991 + AO353_14950 0.52 +1.0 3,305,991 + AO353_14950 0.52 -0.3 3,305,991 + AO353_14950 0.52 +0.5 3,305,991 + AO353_14950 0.52 +1.2 3,305,991 + AO353_14950 0.52 -0.3 3,305,991 + AO353_14950 0.52 -0.5 3,305,991 + AO353_14950 0.52 -0.6 3,305,991 + AO353_14950 0.52 +0.9 3,305,991 + AO353_14950 0.52 +0.7 3,305,991 + AO353_14950 0.52 +2.7 3,305,991 + AO353_14950 0.52 -0.4 3,305,992 - AO353_14950 0.52 -3.0 3,305,992 - AO353_14950 0.52 +1.5 3,305,992 - AO353_14950 0.52 -1.5 3,305,992 - AO353_14950 0.52 +0.1 3,305,992 - AO353_14950 0.52 -0.1 3,305,992 - AO353_14950 0.52 -1.1 3,305,992 - AO353_14950 0.52 +0.1 3,305,992 - AO353_14950 0.52 -1.1 3,305,992 - AO353_14950 0.52 +0.9 3,305,992 - AO353_14950 0.52 +0.0 3,305,992 - AO353_14950 0.52 -0.1 3,305,992 - AO353_14950 0.52 +0.7 3,305,992 - AO353_14950 0.52 -1.0 3,305,992 - AO353_14950 0.52 +0.3 3,305,992 - AO353_14950 0.52 -1.7 3,305,992 - AO353_14950 0.52 -1.4 3,305,992 - AO353_14950 0.52 -0.1 3,305,992 - AO353_14950 0.52 +0.5 3,306,033 + AO353_14950 0.59 -0.7 3,306,033 + AO353_14950 0.59 -0.3 3,306,033 + AO353_14950 0.59 -0.3 3,306,033 + AO353_14950 0.59 -0.1 3,306,033 + AO353_14950 0.59 +0.5 3,306,033 + AO353_14950 0.59 +1.9 3,306,034 - AO353_14950 0.60 -0.7 3,306,034 - AO353_14950 0.60 +0.4 3,306,034 - AO353_14950 0.60 +0.3 3,306,057 + AO353_14950 0.64 -0.2 3,306,057 + AO353_14950 0.64 -0.6 3,306,057 + AO353_14950 0.64 +0.9 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 -0.4 3,306,057 + AO353_14950 0.64 +0.0 3,306,057 + AO353_14950 0.64 -0.2 3,306,057 + AO353_14950 0.64 -1.5 3,306,057 + AO353_14950 0.64 +0.5 3,306,057 + AO353_14950 0.64 -2.5 3,306,057 + AO353_14950 0.64 +0.0 3,306,057 + AO353_14950 0.64 +0.7 3,306,057 + AO353_14950 0.64 -1.1 3,306,057 + AO353_14950 0.64 -2.3 3,306,057 + AO353_14950 0.64 +0.2 3,306,057 + AO353_14950 0.64 -0.2 3,306,057 + AO353_14950 0.64 +1.2 3,306,057 + AO353_14950 0.64 +0.5 3,306,057 + AO353_14950 0.64 +0.8 3,306,057 + AO353_14950 0.64 +0.6 3,306,057 + AO353_14950 0.64 -0.9 3,306,057 + AO353_14950 0.64 -0.1 3,306,057 + AO353_14950 0.64 -0.1 3,306,057 + AO353_14950 0.64 +1.3 3,306,057 + AO353_14950 0.64 -1.0 3,306,057 + AO353_14950 0.64 -0.8 3,306,057 + AO353_14950 0.64 +1.5 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 +0.8 3,306,057 + AO353_14950 0.64 +0.2 3,306,057 + AO353_14950 0.64 +1.1 3,306,057 + AO353_14950 0.64 -0.1 3,306,057 + AO353_14950 0.64 -0.4 3,306,057 + AO353_14950 0.64 +0.5 3,306,057 + AO353_14950 0.64 -0.5 3,306,057 + AO353_14950 0.64 -0.3 3,306,057 + AO353_14950 0.64 +0.6 3,306,057 + AO353_14950 0.64 -0.6 3,306,057 + AO353_14950 0.64 -0.1 3,306,057 + AO353_14950 0.64 -0.2 3,306,057 + AO353_14950 0.64 -1.2 3,306,057 + AO353_14950 0.64 +0.2 3,306,058 - AO353_14950 0.64 +1.8 3,306,058 - AO353_14950 0.64 +0.6 3,306,058 - AO353_14950 0.64 -0.5 3,306,058 - AO353_14950 0.64 -2.6 3,306,058 - AO353_14950 0.64 +0.2 3,306,058 - AO353_14950 0.64 -0.9 3,306,058 - AO353_14950 0.64 +0.2 3,306,058 - AO353_14950 0.64 -0.6 3,306,058 - AO353_14950 0.64 +0.5 3,306,058 - AO353_14950 0.64 -1.2 3,306,058 - AO353_14950 0.64 +0.0 3,306,058 - AO353_14950 0.64 -1.7 3,306,058 - AO353_14950 0.64 -0.2 3,306,058 - AO353_14950 0.64 +0.0 3,306,058 - AO353_14950 0.64 -1.8 3,306,058 - AO353_14950 0.64 +3.0 3,306,058 - AO353_14950 0.64 +0.6 3,306,058 - AO353_14950 0.64 +0.0 3,306,058 - AO353_14950 0.64 +0.7 3,306,058 - AO353_14950 0.64 -0.8 3,306,058 - AO353_14950 0.64 -0.0 3,306,058 - AO353_14950 0.64 -1.5 3,306,058 - AO353_14950 0.64 -0.6 3,306,058 - AO353_14950 0.64 -0.9 3,306,058 - AO353_14950 0.64 -0.3 3,306,058 - AO353_14950 0.64 +1.0 3,306,058 - AO353_14950 0.64 -0.7 3,306,058 - AO353_14950 0.64 +0.9 3,306,058 - AO353_14950 0.64 +0.6 3,306,058 - AO353_14950 0.64 -0.5 3,306,058 - AO353_14950 0.64 -0.5 3,306,058 - AO353_14950 0.64 -0.4 3,306,058 - AO353_14950 0.64 -0.7 3,306,058 - AO353_14950 0.64 -1.2 3,306,058 - AO353_14950 0.64 -0.2 3,306,058 - AO353_14950 0.64 -0.1 3,306,058 - AO353_14950 0.64 +1.2 3,306,058 - AO353_14950 0.64 +0.2 3,306,058 - AO353_14950 0.64 -0.6 3,306,058 - AO353_14950 0.64 +0.4 3,306,075 - AO353_14950 0.67 -0.7 3,306,075 - AO353_14950 0.67 -0.1 3,306,121 - AO353_14950 0.75 -0.0 3,306,121 - AO353_14950 0.75 -0.8 3,306,121 - AO353_14950 0.75 +1.5 3,306,355 - +0.7 3,306,396 + -1.9 3,306,402 + -0.4 3,306,402 + -0.4 3,306,412 + +1.2 3,306,412 + -0.5 3,306,412 + +0.2 3,306,412 + -0.7 3,306,412 + -0.6 3,306,413 - +0.3 3,306,413 - +0.7 3,306,413 - +0.7 3,306,413 - -0.1 3,306,413 - -1.1
Or see this region's nucleotide sequence