Experiment: sodium fluoride 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00190 and AO353_00195 are separated by 11 nucleotides AO353_00195 and AO353_00200 overlap by 14 nucleotides AO353_00200 and AO353_00205 overlap by 4 nucleotides AO353_00205 and AO353_00210 are separated by 97 nucleotides
AO353_00190: AO353_00190 - phage tail protein, at 36,039 to 37,154
_00190
AO353_00195: AO353_00195 - virion morphogenesis protein, at 37,166 to 37,849
_00195
AO353_00200: AO353_00200 - phage tail protein, at 37,836 to 38,288
_00200
AO353_00205: AO353_00205 - head protein, at 38,285 to 38,746
_00205
AO353_00210: AO353_00210 - terminase, at 38,844 to 39,566
_00210
Position (kb) 37
38 Strain fitness (log2 ratio) -2
-1
0
1 at 36.210 kb on - strand, within AO353_00190 at 36.321 kb on + strand, within AO353_00190 at 36.321 kb on + strand, within AO353_00190 at 36.421 kb on + strand, within AO353_00190 at 36.443 kb on - strand, within AO353_00190 at 36.443 kb on - strand, within AO353_00190 at 36.586 kb on - strand, within AO353_00190 at 36.704 kb on - strand, within AO353_00190 at 36.704 kb on - strand, within AO353_00190 at 36.704 kb on - strand, within AO353_00190 at 36.756 kb on + strand, within AO353_00190 at 36.756 kb on + strand, within AO353_00190 at 36.757 kb on - strand, within AO353_00190 at 36.769 kb on + strand, within AO353_00190 at 36.769 kb on + strand, within AO353_00190 at 36.769 kb on + strand, within AO353_00190 at 36.769 kb on + strand, within AO353_00190 at 36.770 kb on - strand, within AO353_00190 at 36.804 kb on - strand, within AO353_00190 at 37.084 kb on + strand at 37.084 kb on + strand at 37.084 kb on + strand at 37.084 kb on + strand at 37.085 kb on - strand at 37.181 kb on + strand at 37.181 kb on + strand at 37.182 kb on - strand at 37.341 kb on + strand, within AO353_00195 at 37.341 kb on + strand, within AO353_00195 at 37.341 kb on + strand, within AO353_00195 at 37.342 kb on - strand, within AO353_00195 at 37.342 kb on - strand, within AO353_00195 at 37.772 kb on + strand, within AO353_00195 at 37.806 kb on - strand at 37.837 kb on + strand at 37.952 kb on - strand, within AO353_00200 at 38.124 kb on + strand, within AO353_00200 at 38.288 kb on + strand at 38.288 kb on + strand at 38.289 kb on - strand at 38.289 kb on - strand at 38.440 kb on + strand, within AO353_00205 at 38.440 kb on + strand, within AO353_00205 at 38.440 kb on + strand, within AO353_00205 at 38.440 kb on + strand, within AO353_00205 at 38.440 kb on + strand, within AO353_00205 at 38.441 kb on - strand, within AO353_00205 at 38.457 kb on + strand, within AO353_00205 at 38.458 kb on - strand, within AO353_00205 at 38.458 kb on - strand, within AO353_00205 at 38.472 kb on + strand, within AO353_00205 at 38.472 kb on + strand, within AO353_00205 at 38.473 kb on - strand, within AO353_00205 at 38.481 kb on - strand, within AO353_00205 at 38.509 kb on + strand, within AO353_00205 at 38.509 kb on + strand, within AO353_00205 at 38.631 kb on + strand, within AO353_00205 at 38.702 kb on + strand at 38.703 kb on - strand at 38.703 kb on - strand at 38.763 kb on - strand at 38.797 kb on + strand at 38.797 kb on + strand at 38.798 kb on - strand at 38.798 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 6.25 mM remove 36,210 - AO353_00190 0.15 +0.3 36,321 + AO353_00190 0.25 -0.3 36,321 + AO353_00190 0.25 +1.2 36,421 + AO353_00190 0.34 -0.7 36,443 - AO353_00190 0.36 -1.8 36,443 - AO353_00190 0.36 -0.1 36,586 - AO353_00190 0.49 -0.3 36,704 - AO353_00190 0.60 -1.3 36,704 - AO353_00190 0.60 -0.1 36,704 - AO353_00190 0.60 +1.6 36,756 + AO353_00190 0.64 +1.0 36,756 + AO353_00190 0.64 +0.7 36,757 - AO353_00190 0.64 -0.6 36,769 + AO353_00190 0.65 +0.0 36,769 + AO353_00190 0.65 +0.3 36,769 + AO353_00190 0.65 -0.2 36,769 + AO353_00190 0.65 +0.3 36,770 - AO353_00190 0.66 -0.3 36,804 - AO353_00190 0.69 -0.8 37,084 + +0.0 37,084 + -1.7 37,084 + +1.4 37,084 + -1.2 37,085 - +0.9 37,181 + -0.2 37,181 + +0.6 37,182 - -0.1 37,341 + AO353_00195 0.26 +0.0 37,341 + AO353_00195 0.26 -2.1 37,341 + AO353_00195 0.26 -0.7 37,342 - AO353_00195 0.26 +0.3 37,342 - AO353_00195 0.26 -0.2 37,772 + AO353_00195 0.89 -1.4 37,806 - -0.3 37,837 + +0.3 37,952 - AO353_00200 0.26 +0.2 38,124 + AO353_00200 0.64 -0.2 38,288 + -0.8 38,288 + +0.2 38,289 - +1.0 38,289 - +1.1 38,440 + AO353_00205 0.34 +0.3 38,440 + AO353_00205 0.34 +0.8 38,440 + AO353_00205 0.34 +0.3 38,440 + AO353_00205 0.34 -1.9 38,440 + AO353_00205 0.34 +0.0 38,441 - AO353_00205 0.34 -0.7 38,457 + AO353_00205 0.37 -0.3 38,458 - AO353_00205 0.37 +1.1 38,458 - AO353_00205 0.37 -1.8 38,472 + AO353_00205 0.40 +0.3 38,472 + AO353_00205 0.40 -1.0 38,473 - AO353_00205 0.41 -1.8 38,481 - AO353_00205 0.42 -0.4 38,509 + AO353_00205 0.48 +0.4 38,509 + AO353_00205 0.48 -1.4 38,631 + AO353_00205 0.75 -0.2 38,702 + +1.5 38,703 - +0.4 38,703 - -0.4 38,763 - -1.2 38,797 + -1.4 38,797 + +0.1 38,798 - +0.4 38,798 - -1.8
Or see this region's nucleotide sequence