Experiment: Cobalt chloride 10 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_03965 and IAI47_03970 overlap by 4 nucleotides IAI47_03970 and IAI47_03975 are separated by 49 nucleotides
IAI47_03965: IAI47_03965 - exodeoxyribonuclease V subunit beta, at 828,659 to 832,198
_03965
IAI47_03970: IAI47_03970 - exodeoxyribonuclease V subunit alpha, at 832,195 to 834,036
_03970
IAI47_03975: IAI47_03975 - amino-acid N-acetyltransferase, at 834,086 to 835,414
_03975
Position (kb) 832
833
834
835 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 832.194 kb on + strand at 832.194 kb on + strand at 832.194 kb on + strand at 832.194 kb on + strand at 832.194 kb on + strand at 832.194 kb on + strand at 832.195 kb on - strand at 832.195 kb on - strand at 832.229 kb on + strand at 832.514 kb on + strand, within IAI47_03970 at 832.514 kb on + strand, within IAI47_03970 at 832.514 kb on + strand, within IAI47_03970 at 832.515 kb on - strand, within IAI47_03970 at 832.515 kb on - strand, within IAI47_03970 at 832.515 kb on - strand, within IAI47_03970 at 832.529 kb on + strand, within IAI47_03970 at 832.529 kb on + strand, within IAI47_03970 at 832.529 kb on + strand, within IAI47_03970 at 832.530 kb on - strand, within IAI47_03970 at 832.530 kb on - strand, within IAI47_03970 at 832.531 kb on + strand, within IAI47_03970 at 832.531 kb on + strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.532 kb on - strand, within IAI47_03970 at 832.609 kb on - strand, within IAI47_03970 at 832.633 kb on - strand, within IAI47_03970 at 832.917 kb on + strand, within IAI47_03970 at 832.918 kb on - strand, within IAI47_03970 at 832.962 kb on - strand, within IAI47_03970 at 832.967 kb on - strand, within IAI47_03970 at 832.967 kb on - strand, within IAI47_03970 at 833.140 kb on - strand, within IAI47_03970 at 833.140 kb on - strand, within IAI47_03970 at 833.165 kb on - strand, within IAI47_03970 at 833.165 kb on - strand, within IAI47_03970 at 833.213 kb on + strand, within IAI47_03970 at 833.214 kb on - strand, within IAI47_03970 at 833.279 kb on - strand, within IAI47_03970 at 833.325 kb on + strand, within IAI47_03970 at 833.386 kb on + strand, within IAI47_03970 at 833.386 kb on + strand, within IAI47_03970 at 833.387 kb on - strand, within IAI47_03970 at 833.413 kb on + strand, within IAI47_03970 at 833.413 kb on + strand, within IAI47_03970 at 833.414 kb on - strand, within IAI47_03970 at 833.446 kb on + strand, within IAI47_03970 at 833.446 kb on + strand, within IAI47_03970 at 833.446 kb on + strand, within IAI47_03970 at 833.499 kb on - strand, within IAI47_03970 at 833.534 kb on + strand, within IAI47_03970 at 833.534 kb on + strand, within IAI47_03970 at 833.534 kb on + strand, within IAI47_03970 at 833.574 kb on + strand, within IAI47_03970 at 833.575 kb on - strand, within IAI47_03970 at 833.635 kb on + strand, within IAI47_03970 at 833.635 kb on + strand, within IAI47_03970 at 833.635 kb on + strand, within IAI47_03970 at 833.635 kb on + strand, within IAI47_03970 at 833.908 kb on + strand at 833.908 kb on + strand at 833.909 kb on - strand at 833.909 kb on - strand at 833.909 kb on - strand at 833.943 kb on + strand at 833.943 kb on + strand at 833.943 kb on + strand at 833.943 kb on + strand at 833.944 kb on - strand at 833.944 kb on - strand at 833.944 kb on - strand at 833.947 kb on + strand at 833.947 kb on + strand at 833.947 kb on + strand at 833.947 kb on + strand at 833.947 kb on + strand at 833.947 kb on + strand at 833.948 kb on - strand at 833.948 kb on - strand at 834.011 kb on + strand at 834.126 kb on + strand at 834.127 kb on - strand at 834.127 kb on - strand at 834.127 kb on - strand at 834.127 kb on - strand at 834.127 kb on - strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.130 kb on + strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.131 kb on - strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.132 kb on + strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.133 kb on - strand at 834.166 kb on + strand at 834.167 kb on - strand at 834.167 kb on - strand at 834.167 kb on - strand at 834.205 kb on + strand at 834.205 kb on + strand at 834.353 kb on - strand, within IAI47_03975 at 834.353 kb on - strand, within IAI47_03975 at 834.360 kb on + strand, within IAI47_03975 at 834.360 kb on + strand, within IAI47_03975 at 834.361 kb on - strand, within IAI47_03975 at 834.400 kb on + strand, within IAI47_03975 at 834.401 kb on - strand, within IAI47_03975 at 834.412 kb on + strand, within IAI47_03975 at 834.413 kb on - strand, within IAI47_03975 at 834.413 kb on - strand, within IAI47_03975 at 834.413 kb on - strand, within IAI47_03975 at 834.413 kb on - strand, within IAI47_03975 at 834.449 kb on + strand, within IAI47_03975 at 834.449 kb on + strand, within IAI47_03975 at 834.449 kb on + strand, within IAI47_03975 at 834.449 kb on + strand, within IAI47_03975 at 834.449 kb on + strand, within IAI47_03975 at 834.450 kb on - strand, within IAI47_03975 at 834.511 kb on + strand, within IAI47_03975 at 834.511 kb on + strand, within IAI47_03975 at 834.512 kb on - strand, within IAI47_03975 at 834.562 kb on + strand, within IAI47_03975 at 834.563 kb on - strand, within IAI47_03975 at 834.609 kb on + strand, within IAI47_03975 at 834.610 kb on - strand, within IAI47_03975 at 834.610 kb on - strand, within IAI47_03975 at 834.617 kb on + strand, within IAI47_03975 at 834.617 kb on + strand, within IAI47_03975 at 834.618 kb on - strand, within IAI47_03975 at 834.618 kb on - strand, within IAI47_03975 at 834.690 kb on + strand, within IAI47_03975 at 834.691 kb on - strand, within IAI47_03975 at 834.706 kb on - strand, within IAI47_03975 at 834.755 kb on - strand, within IAI47_03975 at 834.755 kb on - strand, within IAI47_03975 at 834.769 kb on + strand, within IAI47_03975 at 834.770 kb on - strand, within IAI47_03975 at 834.770 kb on - strand, within IAI47_03975 at 834.823 kb on + strand, within IAI47_03975 at 834.952 kb on + strand, within IAI47_03975 at 834.952 kb on + strand, within IAI47_03975 at 834.961 kb on + strand, within IAI47_03975 at 834.978 kb on + strand, within IAI47_03975 at 834.978 kb on + strand, within IAI47_03975 at 834.978 kb on + strand, within IAI47_03975 at 834.979 kb on - strand, within IAI47_03975 at 835.015 kb on + strand, within IAI47_03975 at 835.015 kb on + strand, within IAI47_03975
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 10 uM, anaerobic remove 832,194 + +0.9 832,194 + +0.6 832,194 + +0.0 832,194 + -1.0 832,194 + -0.1 832,194 + +0.9 832,195 - +0.8 832,195 - +1.5 832,229 + +1.7 832,514 + IAI47_03970 0.17 -1.2 832,514 + IAI47_03970 0.17 +0.4 832,514 + IAI47_03970 0.17 -0.4 832,515 - IAI47_03970 0.17 -0.9 832,515 - IAI47_03970 0.17 +0.8 832,515 - IAI47_03970 0.17 -1.9 832,529 + IAI47_03970 0.18 +0.4 832,529 + IAI47_03970 0.18 +1.6 832,529 + IAI47_03970 0.18 -2.5 832,530 - IAI47_03970 0.18 +0.1 832,530 - IAI47_03970 0.18 -1.6 832,531 + IAI47_03970 0.18 -1.0 832,531 + IAI47_03970 0.18 -1.6 832,532 - IAI47_03970 0.18 -0.3 832,532 - IAI47_03970 0.18 -2.0 832,532 - IAI47_03970 0.18 +0.0 832,532 - IAI47_03970 0.18 -0.7 832,532 - IAI47_03970 0.18 +1.8 832,532 - IAI47_03970 0.18 -0.3 832,532 - IAI47_03970 0.18 +0.4 832,532 - IAI47_03970 0.18 -0.4 832,532 - IAI47_03970 0.18 +1.0 832,532 - IAI47_03970 0.18 +1.0 832,609 - IAI47_03970 0.22 -0.4 832,633 - IAI47_03970 0.24 -1.5 832,917 + IAI47_03970 0.39 -1.8 832,918 - IAI47_03970 0.39 +1.8 832,962 - IAI47_03970 0.42 -2.2 832,967 - IAI47_03970 0.42 +0.6 832,967 - IAI47_03970 0.42 -1.5 833,140 - IAI47_03970 0.51 -0.4 833,140 - IAI47_03970 0.51 -0.0 833,165 - IAI47_03970 0.53 +0.3 833,165 - IAI47_03970 0.53 +0.9 833,213 + IAI47_03970 0.55 +0.5 833,214 - IAI47_03970 0.55 -1.9 833,279 - IAI47_03970 0.59 -1.0 833,325 + IAI47_03970 0.61 +0.6 833,386 + IAI47_03970 0.65 -1.7 833,386 + IAI47_03970 0.65 -0.5 833,387 - IAI47_03970 0.65 +0.7 833,413 + IAI47_03970 0.66 -0.5 833,413 + IAI47_03970 0.66 -0.2 833,414 - IAI47_03970 0.66 -1.1 833,446 + IAI47_03970 0.68 -0.3 833,446 + IAI47_03970 0.68 -0.6 833,446 + IAI47_03970 0.68 +1.3 833,499 - IAI47_03970 0.71 +0.8 833,534 + IAI47_03970 0.73 +0.5 833,534 + IAI47_03970 0.73 -0.6 833,534 + IAI47_03970 0.73 +0.4 833,574 + IAI47_03970 0.75 -0.2 833,575 - IAI47_03970 0.75 -0.3 833,635 + IAI47_03970 0.78 -2.0 833,635 + IAI47_03970 0.78 -0.6 833,635 + IAI47_03970 0.78 +0.8 833,635 + IAI47_03970 0.78 -1.6 833,908 + -0.8 833,908 + -1.2 833,909 - -0.4 833,909 - +0.4 833,909 - -1.4 833,943 + -0.5 833,943 + +0.1 833,943 + -1.3 833,943 + -2.6 833,944 - -0.5 833,944 - -0.3 833,944 - +0.7 833,947 + -1.4 833,947 + +0.8 833,947 + -0.7 833,947 + +1.0 833,947 + -1.9 833,947 + +0.3 833,948 - +0.5 833,948 - +0.0 834,011 + -0.8 834,126 + -3.5 834,127 - -2.5 834,127 - -1.6 834,127 - -1.5 834,127 - -3.1 834,127 - -2.0 834,130 + -2.6 834,130 + -3.4 834,130 + -1.3 834,130 + -0.5 834,130 + -2.1 834,130 + -2.5 834,130 + -2.6 834,130 + -2.3 834,130 + -2.3 834,131 - -3.0 834,131 - -1.5 834,131 - -3.3 834,131 - -4.2 834,131 - -3.1 834,131 - -0.3 834,131 - -5.2 834,131 - -3.0 834,131 - -1.0 834,131 - -2.3 834,131 - -1.8 834,131 - -3.3 834,131 - -2.2 834,131 - -0.0 834,131 - -1.8 834,131 - -2.7 834,131 - -1.3 834,131 - -1.9 834,131 - -1.8 834,132 + -2.1 834,132 + -1.5 834,132 + -0.9 834,132 + -2.0 834,132 + -1.0 834,132 + -2.3 834,132 + -2.6 834,132 + -2.8 834,132 + -2.5 834,132 + -3.0 834,132 + -3.1 834,132 + -4.1 834,132 + -4.7 834,132 + -1.5 834,132 + -3.3 834,132 + -2.5 834,132 + -2.3 834,132 + -3.1 834,132 + -3.0 834,132 + -2.9 834,132 + -2.2 834,132 + -2.2 834,132 + -1.0 834,132 + -2.7 834,132 + -2.2 834,132 + -3.8 834,132 + -2.7 834,132 + -3.6 834,132 + -2.2 834,132 + -2.1 834,132 + -3.1 834,132 + -2.4 834,132 + -3.0 834,132 + -3.8 834,132 + -3.8 834,132 + -2.8 834,132 + -0.7 834,132 + -0.8 834,132 + -2.1 834,133 - -3.7 834,133 - -3.6 834,133 - -2.0 834,133 - -3.0 834,133 - -3.2 834,133 - -2.5 834,133 - -1.2 834,133 - -3.4 834,133 - -4.1 834,133 - -2.8 834,133 - -3.8 834,133 - -2.7 834,133 - -2.3 834,133 - -0.3 834,133 - +0.2 834,133 - -4.0 834,133 - -2.2 834,133 - -3.4 834,133 - -2.0 834,133 - -4.2 834,133 - -1.5 834,133 - -2.4 834,133 - -2.9 834,133 - -1.8 834,133 - -0.6 834,133 - -1.8 834,133 - -2.3 834,133 - -1.8 834,133 - -3.8 834,133 - -2.4 834,133 - -3.0 834,133 - -0.3 834,133 - -5.1 834,133 - -1.4 834,133 - -1.2 834,133 - -2.3 834,133 - -1.8 834,133 - -3.0 834,133 - -2.8 834,133 - -2.0 834,133 - -3.0 834,133 - -3.4 834,133 - -3.1 834,133 - -0.9 834,133 - -1.8 834,133 - -2.4 834,133 - -2.5 834,133 - -0.6 834,133 - -1.7 834,133 - -2.0 834,133 - -1.4 834,133 - -4.9 834,133 - -3.9 834,133 - -2.7 834,133 - +0.5 834,133 - -0.6 834,133 - -3.0 834,166 + -0.3 834,167 - -3.4 834,167 - -2.6 834,167 - -3.1 834,205 + -3.3 834,205 + -1.4 834,353 - IAI47_03975 0.20 -1.9 834,353 - IAI47_03975 0.20 -0.5 834,360 + IAI47_03975 0.21 -2.0 834,360 + IAI47_03975 0.21 -2.7 834,361 - IAI47_03975 0.21 -2.2 834,400 + IAI47_03975 0.24 -4.5 834,401 - IAI47_03975 0.24 -2.5 834,412 + IAI47_03975 0.25 -4.2 834,413 - IAI47_03975 0.25 -2.5 834,413 - IAI47_03975 0.25 -1.9 834,413 - IAI47_03975 0.25 -1.5 834,413 - IAI47_03975 0.25 -3.4 834,449 + IAI47_03975 0.27 -3.7 834,449 + IAI47_03975 0.27 -3.2 834,449 + IAI47_03975 0.27 -1.4 834,449 + IAI47_03975 0.27 -2.5 834,449 + IAI47_03975 0.27 -0.9 834,450 - IAI47_03975 0.27 -3.5 834,511 + IAI47_03975 0.32 -1.9 834,511 + IAI47_03975 0.32 -2.2 834,512 - IAI47_03975 0.32 -2.4 834,562 + IAI47_03975 0.36 -2.2 834,563 - IAI47_03975 0.36 -2.9 834,609 + IAI47_03975 0.39 -2.6 834,610 - IAI47_03975 0.39 -2.6 834,610 - IAI47_03975 0.39 -2.9 834,617 + IAI47_03975 0.40 -3.4 834,617 + IAI47_03975 0.40 -1.6 834,618 - IAI47_03975 0.40 -2.9 834,618 - IAI47_03975 0.40 -2.8 834,690 + IAI47_03975 0.45 -2.3 834,691 - IAI47_03975 0.46 -3.1 834,706 - IAI47_03975 0.47 -3.7 834,755 - IAI47_03975 0.50 -3.9 834,755 - IAI47_03975 0.50 -1.9 834,769 + IAI47_03975 0.51 -1.4 834,770 - IAI47_03975 0.51 -1.9 834,770 - IAI47_03975 0.51 -2.4 834,823 + IAI47_03975 0.55 -3.1 834,952 + IAI47_03975 0.65 -4.3 834,952 + IAI47_03975 0.65 -1.9 834,961 + IAI47_03975 0.66 -3.8 834,978 + IAI47_03975 0.67 -0.4 834,978 + IAI47_03975 0.67 -2.5 834,978 + IAI47_03975 0.67 -2.4 834,979 - IAI47_03975 0.67 -4.0 835,015 + IAI47_03975 0.70 -1.8 835,015 + IAI47_03975 0.70 -1.8
Or see this region's nucleotide sequence