Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25825

Experiment: copper (II) chloride 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2.5 mM
5,691,101	+		AO353_25820	0.44	+0.2
5,691,102	-		AO353_25820	0.44	+0.7
5,691,212	-		AO353_25820	0.53	-0.8
5,691,351	+		AO353_25820	0.64	-0.4
5,691,352	-		AO353_25820	0.64	-0.1
5,691,352	-		AO353_25820	0.64	+0.0
5,691,528	+		AO353_25820	0.77	+0.0
5,691,529	-		AO353_25820	0.77	-1.8
5,691,529	-		AO353_25820	0.77	+0.1
5,691,529	-		AO353_25820	0.77	+0.1
5,691,529	-		AO353_25820	0.77	+0.4
5,691,529	-		AO353_25820	0.77	+1.2
5,691,532	+		AO353_25820	0.78	-1.6
5,691,532	+		AO353_25820	0.78	+1.4
5,691,533	-		AO353_25820	0.78	-1.6
5,691,533	-		AO353_25820	0.78	+0.4
5,691,695	-				+0.2
5,691,771	-				-0.6
5,691,810	-				-0.4
5,691,859	-				+0.2
5,691,859	-				-0.8
5,691,923	+				+0.7
5,691,923	+				+1.0
5,691,924	-				-0.8
5,691,924	-				-2.0
5,691,924	-				-1.3
5,691,964	+				-0.3
5,691,964	+				-1.9
5,691,964	+				-1.3
5,691,965	-				-0.1
5,691,999	-				-0.3
5,691,999	-				-2.4
5,692,099	+		AO353_25825	0.11	-0.4
5,692,100	-		AO353_25825	0.11	-0.4
5,692,197	-		AO353_25825	0.17	-2.1
5,692,197	-		AO353_25825	0.17	-1.6
5,692,197	-		AO353_25825	0.17	-1.7
5,692,197	-		AO353_25825	0.17	+0.4
5,692,197	-		AO353_25825	0.17	-2.3
5,692,197	-		AO353_25825	0.17	+0.2
5,692,213	+		AO353_25825	0.18	-0.4
5,692,213	+		AO353_25825	0.18	-0.1
5,692,214	-		AO353_25825	0.18	-0.3
5,692,214	-		AO353_25825	0.18	-0.8
5,692,214	-		AO353_25825	0.18	-1.4
5,692,260	-		AO353_25825	0.21	-1.3
5,692,260	-		AO353_25825	0.21	-0.4
5,692,260	-		AO353_25825	0.21	-0.3
5,692,260	-		AO353_25825	0.21	-1.8
5,692,424	+		AO353_25825	0.32	-0.6
5,692,433	+		AO353_25825	0.33	-1.4
5,692,433	+		AO353_25825	0.33	+1.0
5,692,434	-		AO353_25825	0.33	-3.0
5,692,692	+		AO353_25825	0.50	-1.2
5,692,793	+		AO353_25825	0.57	+1.1
5,692,793	+		AO353_25825	0.57	-1.3
5,692,793	+		AO353_25825	0.57	+0.3
5,692,793	+		AO353_25825	0.57	-0.7
5,692,794	-		AO353_25825	0.57	-0.6
5,692,794	-		AO353_25825	0.57	-2.5
5,692,794	-		AO353_25825	0.57	-2.7
5,692,848	+		AO353_25825	0.61	-2.2
5,692,848	+		AO353_25825	0.61	-0.3
5,692,848	+		AO353_25825	0.61	-1.8
5,692,849	-		AO353_25825	0.61	-2.4
5,693,037	+		AO353_25825	0.73	-2.1
5,693,037	+		AO353_25825	0.73	-0.8
5,693,038	-		AO353_25825	0.73	+0.7
5,693,038	-		AO353_25825	0.73	-0.3
5,693,180	+		AO353_25825	0.83	+0.2
5,693,180	+		AO353_25825	0.83	+0.5
5,693,181	-		AO353_25825	0.83	+0.6
5,693,181	-		AO353_25825	0.83	-1.4
5,693,181	-		AO353_25825	0.83	+0.2
5,693,181	-		AO353_25825	0.83	+0.9
5,693,181	-		AO353_25825	0.83	+0.4
5,693,181	-		AO353_25825	0.83	-1.6
5,693,181	-		AO353_25825	0.83	-1.8
5,693,181	-		AO353_25825	0.83	-1.6
5,693,218	+		AO353_25825	0.85	-2.9
5,693,387	+				-1.4
5,693,387	+				+0.2
5,693,388	-				-1.3
5,693,388	-				-1.5
5,693,418	-				-0.4
5,693,429	+				+0.9
5,693,429	+				-0.6
5,693,430	-				-0.7
5,693,445	+				-0.1
5,693,445	+				+0.5
5,693,445	+				+0.4
5,693,445	+				+1.3
5,693,445	+				-0.6
5,693,445	+				+1.2
5,693,445	+				-0.6
5,693,445	+				-0.3
5,693,445	+				+0.6
5,693,446	-				-0.6
5,693,446	-				-0.7
5,693,446	-				-0.6
5,693,446	-				-0.8
5,693,446	-				+0.4
5,693,446	-				+3.3
5,693,446	-				+0.6
5,693,446	-				-1.6
5,693,446	-				+1.7
5,693,446	-				+0.1
5,693,446	-				+0.9
5,693,487	+				-2.1
5,693,487	+				+0.7
5,693,487	+				+1.3
5,693,487	+				-1.1
5,693,488	-				-0.4
5,693,488	-				-0.1
5,693,488	-				-0.4
5,693,494	+				-0.4
5,693,494	+				-1.3
5,693,494	+				+0.8
5,693,494	+				-1.0
5,693,494	+				+0.7
5,693,494	+				-0.8
5,693,495	-				+0.9
5,693,495	-				+0.0
5,693,495	-				-1.1
5,693,544	+				+1.0
5,693,544	+				+0.6
5,693,544	+				+0.3
5,693,545	-				+1.7
5,693,545	-				-1.1
5,693,545	-				+0.4
5,693,584	+				+0.7
5,693,584	+				-0.0
5,693,584	+				-0.4
5,693,585	-				+0.3
5,693,585	-				-0.2
5,693,585	-				-1.6
5,693,585	-				-0.5
5,693,701	+		AO353_25830	0.13	-1.0
5,693,701	+		AO353_25830	0.13	-0.0
5,693,701	+		AO353_25830	0.13	-0.9
5,693,701	+		AO353_25830	0.13	+0.3
5,693,701	+		AO353_25830	0.13	-0.7
5,693,702	-		AO353_25830	0.13	+0.4
5,693,702	-		AO353_25830	0.13	-2.5
5,693,702	-		AO353_25830	0.13	-1.1
5,693,702	-		AO353_25830	0.13	+0.5
5,693,702	-		AO353_25830	0.13	-0.5
5,693,702	-		AO353_25830	0.13	-1.3
5,693,702	-		AO353_25830	0.13	-1.4
5,693,702	-		AO353_25830	0.13	+0.2
5,693,702	-		AO353_25830	0.13	+0.7
5,693,743	+		AO353_25830	0.16	+1.0
5,693,743	+		AO353_25830	0.16	+0.7
5,693,743	+		AO353_25830	0.16	-0.1
5,693,743	+		AO353_25830	0.16	-3.3
5,693,744	-		AO353_25830	0.16	-2.1
5,693,744	-		AO353_25830	0.16	+0.1
5,693,744	-		AO353_25830	0.16	-0.8
5,693,753	-		AO353_25830	0.16	-0.6
5,693,753	-		AO353_25830	0.16	+1.5
5,693,753	-		AO353_25830	0.16	+0.2
5,693,774	+		AO353_25830	0.18	-1.3
5,693,774	+		AO353_25830	0.18	+0.7
5,693,775	-		AO353_25830	0.18	+0.3
5,693,857	+		AO353_25830	0.23	-0.3
5,693,857	+		AO353_25830	0.23	+0.4
5,693,857	+		AO353_25830	0.23	+0.3
5,693,857	+		AO353_25830	0.23	+1.6
5,693,858	-		AO353_25830	0.23	-0.6
5,693,943	+		AO353_25830	0.29	+0.9
5,693,943	+		AO353_25830	0.29	-0.0
5,693,943	+		AO353_25830	0.29	+0.4
5,693,943	+		AO353_25830	0.29	+0.6
5,693,943	+		AO353_25830	0.29	-0.7
5,693,944	-		AO353_25830	0.29	+0.2
5,693,944	-		AO353_25830	0.29	-0.7
5,693,944	-		AO353_25830	0.29	+1.3
5,693,972	-		AO353_25830	0.31	+0.3
5,694,109	+		AO353_25830	0.40	-1.7
5,694,109	+		AO353_25830	0.40	+1.4
5,694,109	+		AO353_25830	0.40	-0.4
5,694,109	+		AO353_25830	0.40	+0.7
5,694,109	+		AO353_25830	0.40	-0.3
5,694,109	+		AO353_25830	0.40	-1.1
5,694,110	-		AO353_25830	0.40	-0.8
5,694,110	-		AO353_25830	0.40	+0.0
5,694,110	-		AO353_25830	0.40	-2.4
5,694,261	-		AO353_25830	0.50	-1.0
5,694,261	-		AO353_25830	0.50	+0.9
5,694,261	-		AO353_25830	0.50	-0.8
5,694,345	+		AO353_25830	0.55	+0.7
5,694,346	-		AO353_25830	0.56	+0.4
5,694,346	-		AO353_25830	0.56	-1.4
5,694,346	-		AO353_25830	0.56	+0.3
5,694,346	-		AO353_25830	0.56	+0.0
5,694,346	-		AO353_25830	0.56	+0.3
5,694,358	+		AO353_25830	0.56	+1.0
5,694,358	+		AO353_25830	0.56	-1.1
5,694,358	+		AO353_25830	0.56	-0.3
5,694,358	+		AO353_25830	0.56	+0.2
5,694,358	+		AO353_25830	0.56	-0.5
5,694,358	+		AO353_25830	0.56	+0.3
5,694,358	+				+2.0
5,694,358	+		AO353_25830	0.56	+0.4
5,694,359	-		AO353_25830	0.56	-0.3
5,694,359	-		AO353_25830	0.56	+1.4
5,694,359	-		AO353_25830	0.56	-0.1
5,694,359	-		AO353_25830	0.56	-0.2
5,694,359	-		AO353_25830	0.56	+0.3
5,694,359	-		AO353_25830	0.56	-0.5
5,694,359	-		AO353_25830	0.56	-1.3
5,694,359	-		AO353_25830	0.56	-0.5
5,694,359	-		AO353_25830	0.56	+0.2
5,694,359	-		AO353_25830	0.56	-1.1
5,694,439	+		AO353_25830	0.62	+0.9
5,694,440	-		AO353_25830	0.62	-0.5