Strain Fitness in Rahnella sp. WP5 around EX31_RS14500

Experiment: Ammonium chloride (N); RCH2 media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N); RCH2 media; no shaking
80,050	+		EX31_RS14495	0.57	-0.2
80,050	+		EX31_RS14495	0.57	+0.0
80,051	-		EX31_RS14495	0.57	+0.2
80,051	-		EX31_RS14495	0.57	+0.5
80,137	+		EX31_RS14495	0.61	-0.1
80,150	-		EX31_RS14495	0.61	+1.0
80,158	+		EX31_RS14495	0.61	+1.0
80,159	-		EX31_RS14495	0.62	+0.7
80,159	-		EX31_RS14495	0.62	-0.0
80,159	-		EX31_RS14495	0.62	+0.4
80,170	-		EX31_RS14495	0.62	+0.6
80,184	+		EX31_RS14495	0.63	-0.8
80,215	+		EX31_RS14495	0.64	+0.4
80,216	-		EX31_RS14495	0.64	-1.6
80,229	+		EX31_RS14495	0.65	+0.5
80,230	-		EX31_RS14495	0.65	+0.2
80,231	+		EX31_RS14495	0.65	-0.3
80,231	+		EX31_RS14495	0.65	-1.2
80,231	+		EX31_RS14495	0.65	-0.9
80,231	+		EX31_RS14495	0.65	+0.7
80,232	-		EX31_RS14495	0.65	-0.4
80,259	+		EX31_RS14495	0.66	-1.0
80,260	-		EX31_RS14495	0.66	-0.3
80,260	-		EX31_RS14495	0.66	-2.8
80,262	+		EX31_RS14495	0.66	-0.1
80,262	+		EX31_RS14495	0.66	+0.5
80,262	+		EX31_RS14495	0.66	+0.3
80,262	+		EX31_RS14495	0.66	+0.8
80,263	-		EX31_RS14495	0.66	-0.8
80,263	-		EX31_RS14495	0.66	+0.2
80,327	+		EX31_RS14495	0.69	-0.3
80,327	+		EX31_RS14495	0.69	-3.0
80,327	+		EX31_RS14495	0.69	-0.1
80,328	-		EX31_RS14495	0.69	+0.7
80,328	-		EX31_RS14495	0.69	-0.1
80,386	+		EX31_RS14495	0.72	+0.6
80,386	+		EX31_RS14495	0.72	-1.8
80,386	+		EX31_RS14495	0.72	-0.8
80,386	+		EX31_RS14495	0.72	-0.3
80,387	-		EX31_RS14495	0.72	+0.0
80,387	-		EX31_RS14495	0.72	-0.1
80,392	+		EX31_RS14495	0.72	-0.8
80,393	-		EX31_RS14495	0.72	+0.7
80,413	+		EX31_RS14495	0.73	-0.5
80,413	+		EX31_RS14495	0.73	+0.4
80,413	+		EX31_RS14495	0.73	-0.4
80,414	-		EX31_RS14495	0.73	+1.2
80,414	-		EX31_RS14495	0.73	+1.1
80,453	+		EX31_RS14495	0.75	+0.7
80,453	+		EX31_RS14495	0.75	+0.3
80,453	+		EX31_RS14495	0.75	-0.2
80,453	+		EX31_RS14495	0.75	+0.1
80,453	+		EX31_RS14495	0.75	+1.2
80,453	+		EX31_RS14495	0.75	+0.6
80,453	+		EX31_RS14495	0.75	-1.0
80,453	+		EX31_RS14495	0.75	+0.2
80,453	+		EX31_RS14495	0.75	-0.4
80,453	+		EX31_RS14495	0.75	-0.4
80,453	+		EX31_RS14495	0.75	+0.1
80,453	+		EX31_RS14495	0.75	+0.1
80,454	-		EX31_RS14495	0.75	-0.3
80,454	-		EX31_RS14495	0.75	+0.1
80,454	-		EX31_RS14495	0.75	+0.8
80,454	-		EX31_RS14495	0.75	+1.9
80,454	-		EX31_RS14495	0.75	-0.7
80,454	-		EX31_RS14495	0.75	+0.2
80,470	+		EX31_RS14495	0.76	-0.1
80,470	+		EX31_RS14495	0.76	+0.8
80,471	-		EX31_RS14495	0.76	-0.8
80,471	-		EX31_RS14495	0.76	-0.8
80,471	-		EX31_RS14495	0.76	+0.1
80,496	+		EX31_RS14495	0.77	+1.1
80,496	+		EX31_RS14495	0.77	-0.1
80,496	+		EX31_RS14495	0.77	+0.0
80,496	+		EX31_RS14495	0.77	+0.6
80,496	+		EX31_RS14495	0.77	+0.1
80,497	-		EX31_RS14495	0.77	-0.4
80,535	+		EX31_RS14495	0.79	+0.1
80,542	-		EX31_RS14495	0.79	-0.7
80,542	-		EX31_RS14495	0.79	-0.1
80,615	-		EX31_RS14495	0.82	-0.8
80,680	+		EX31_RS14495	0.85	-0.1
80,681	-		EX31_RS14495	0.85	-0.1
80,681	-		EX31_RS14495	0.85	-0.7
80,756	+		EX31_RS14495	0.89	+0.8
80,784	+		EX31_RS14495	0.90	+0.1
80,784	+		EX31_RS14495	0.90	+0.3
80,785	-		EX31_RS14495	0.90	+0.2
80,785	-		EX31_RS14495	0.90	+0.1
80,805	+				+0.2
80,805	+				-0.1
80,826	+				+1.0
80,826	+				-1.1
80,827	-				-0.3
80,827	-				+1.8
80,885	-				+0.1
80,885	-				-0.5
80,888	+				-0.3
80,888	+				-0.7
80,888	+				+1.2
80,888	+				+0.1
80,888	+				+0.1
80,888	+				+0.5
80,888	+				-0.1
80,888	+				+0.4
80,888	+				+0.3
80,889	-				-0.3
80,889	-				+0.8
80,889	-				+0.5
80,889	-				-0.1
80,889	-				-0.1
80,889	-				-0.2
80,889	-				+0.7
80,889	-				+0.3
80,889	-				+0.0
81,041	+				-1.1
81,042	-				-0.8
81,042	-				+0.1
81,042	-				+0.9
81,050	+				-0.5
81,050	+				-0.4
81,050	+				+0.1
81,050	+				+1.0
81,051	-				-0.3
81,051	-				-0.3
81,051	-				+1.1
81,051	-				-0.5
81,051	-				+0.1
81,051	-				+1.4
81,051	-				+0.7
81,051	-				-1.1
81,051	-				+0.2
81,051	-				+0.8
81,113	+		EX31_RS14500	0.11	-3.2
81,114	-		EX31_RS14500	0.12	-2.1
81,136	-		EX31_RS14500	0.15	-3.8
81,138	+		EX31_RS14500	0.15	-2.0
81,139	-		EX31_RS14500	0.15	-3.3
81,192	+		EX31_RS14500	0.24	-3.1
81,193	-		EX31_RS14500	0.24	-3.4
81,193	-		EX31_RS14500	0.24	-2.3
81,193	-		EX31_RS14500	0.24	-2.4
81,193	-		EX31_RS14500	0.24	-3.5
81,232	+		EX31_RS14500	0.30	-1.9
81,232	+		EX31_RS14500	0.30	-0.9
81,398	+		EX31_RS14500	0.56	-2.5
81,398	+		EX31_RS14500	0.56	-3.3
81,460	-		EX31_RS14500	0.65	-3.1
81,467	+		EX31_RS14500	0.67	-4.4
81,468	-		EX31_RS14500	0.67	-3.0
81,468	-		EX31_RS14500	0.67	-3.0
81,468	-		EX31_RS14500	0.67	-2.9
81,485	-		EX31_RS14500	0.69	-3.5
81,525	-		EX31_RS14500	0.76	-4.9
81,538	+		EX31_RS14500	0.78	-3.1
81,558	+		EX31_RS14500	0.81	-4.2
81,561	+		EX31_RS14500	0.81	-3.9
81,561	+		EX31_RS14500	0.81	-3.4
81,561	+		EX31_RS14500	0.81	-0.6
81,561	+		EX31_RS14500	0.81	-2.0
81,561	+		EX31_RS14500	0.81	-2.9
81,561	+		EX31_RS14500	0.81	-4.6
81,562	-		EX31_RS14500	0.81	-1.7
81,562	-		EX31_RS14500	0.81	-1.3
81,566	-		EX31_RS14500	0.82	-2.8
81,566	-		EX31_RS14500	0.82	-3.9
81,566	-		EX31_RS14500	0.82	-3.0
81,584	+		EX31_RS14500	0.85	-1.3
81,584	+		EX31_RS14500	0.85	-2.0
81,584	+		EX31_RS14500	0.85	-3.2
81,584	+		EX31_RS14500	0.85	-4.7
81,657	+				-1.1
81,657	+				-2.1
81,671	+				-2.8
81,671	+				-0.2
81,672	-				-2.8
81,672	-				-3.2
81,672	-				-2.8
81,672	-				-2.5
81,695	+				-1.5
81,695	+				-1.1
81,695	+				-0.2
81,696	-				-0.3
81,697	+				-2.3
81,705	+				-1.6
81,705	+				-3.9
81,706	-				+0.0
81,712	+				-0.4
81,713	-				+1.1
81,713	-				-0.4
81,767	-				+1.1
81,800	+				-2.4
81,801	-				+0.4
81,801	-				-0.5
81,801	-				+0.9
81,832	-				+0.5
81,840	+		EX31_RS14505	0.10	-1.1
81,952	+		EX31_RS14505	0.26	-1.3
81,953	-		EX31_RS14505	0.26	+0.9
81,953	-		EX31_RS14505	0.26	-0.0
81,953	-		EX31_RS14505	0.26	+0.6
82,025	+		EX31_RS14505	0.36	-2.8
82,025	+		EX31_RS14505	0.36	-0.4
82,026	-		EX31_RS14505	0.36	-0.5
82,037	+		EX31_RS14505	0.38	-0.9
82,038	-		EX31_RS14505	0.38	+1.1
82,048	-		EX31_RS14505	0.39	+0.4
82,048	-		EX31_RS14505	0.39	+0.2
82,048	-		EX31_RS14505	0.39	-0.2
82,048	-		EX31_RS14505	0.39	-0.2
82,145	+		EX31_RS14505	0.53	-0.4
82,145	+		EX31_RS14505	0.53	-2.5
82,146	-		EX31_RS14505	0.53	-0.3
82,146	-		EX31_RS14505	0.53	-0.1
82,146	-		EX31_RS14505	0.53	+0.6
82,223	+		EX31_RS14505	0.64	-2.9
82,223	+		EX31_RS14505	0.64	-3.9
82,223	+		EX31_RS14505	0.64	-2.1
82,223	+		EX31_RS14505	0.64	-1.1
82,224	-		EX31_RS14505	0.64	+0.6
82,224	-		EX31_RS14505	0.64	+0.2
82,263	-		EX31_RS14505	0.69	-0.2
82,269	-		EX31_RS14505	0.70	-0.6
82,274	+		EX31_RS14505	0.71	-3.0
82,275	-		EX31_RS14505	0.71	-0.7
82,275	-		EX31_RS14505	0.71	+0.3
82,275	-		EX31_RS14505	0.71	-0.4
82,294	+		EX31_RS14505	0.74	-0.8
82,295	-		EX31_RS14505	0.74	+0.0
82,364	+		EX31_RS14505	0.84	-2.9
82,364	+		EX31_RS14505	0.84	-0.7
82,364	+		EX31_RS14505	0.84	-2.5
82,364	+		EX31_RS14505	0.84	-1.5
82,364	+		EX31_RS14505	0.84	-3.5
82,364	+		EX31_RS14505	0.84	-3.5
82,365	-		EX31_RS14505	0.84	-0.2
82,365	-		EX31_RS14505	0.84	+0.9
82,365	-		EX31_RS14505	0.84	-0.3
82,365	-		EX31_RS14505	0.84	+0.1
82,368	+		EX31_RS14505	0.84	-2.0
82,368	+		EX31_RS14505	0.84	-2.2
82,368	+		EX31_RS14505	0.84	-3.4
82,368	+		EX31_RS14505	0.84	-0.1
82,368	+		EX31_RS14505	0.84	-2.6
82,368	+		EX31_RS14505	0.84	-3.4
82,368	+		EX31_RS14505	0.84	-2.4
82,368	+		EX31_RS14505	0.84	-0.1
82,369	-		EX31_RS14505	0.84	-0.4
82,369	-		EX31_RS14505	0.84	+0.3
82,369	-		EX31_RS14505	0.84	+0.8
82,369	-		EX31_RS14505	0.84	-1.0
82,369	-		EX31_RS14505	0.84	+1.3
82,369	-		EX31_RS14505	0.84	+1.4
82,369	-		EX31_RS14505	0.84	-0.3
82,369	-		EX31_RS14505	0.84	+0.2
82,369	-		EX31_RS14505	0.84	-0.1
82,376	+		EX31_RS14505	0.85	-1.5
82,376	+		EX31_RS14505	0.85	-2.7
82,376	+		EX31_RS14505	0.85	-2.7
82,376	+		EX31_RS14505	0.85	-1.8
82,376	+		EX31_RS14505	0.85	-2.1
82,376	+		EX31_RS14505	0.85	-2.8
82,377	-		EX31_RS14505	0.85	+0.4
82,377	-		EX31_RS14505	0.85	-0.8
82,377	-		EX31_RS14505	0.85	+1.2
82,377	-		EX31_RS14505	0.85	+1.5
82,377	-		EX31_RS14505	0.85	-0.0
82,377	-		EX31_RS14505	0.85	+0.7
82,418	+				-1.2
82,418	+				-1.4
82,419	-				-0.0
82,424	-				-2.5
82,424	-				-1.6
82,485	+				-1.8
82,485	+				-2.7
82,485	+				-1.7
82,485	+				-1.9
82,485	+				-1.9
82,485	+				-0.9
82,486	-				+0.5
82,486	-				-2.2
82,486	-				-0.2
82,486	-				+0.7
82,486	-				-1.0
82,486	-				-0.5
82,486	-				+0.3
82,486	-				-1.5
82,486	-				+0.5
82,486	-				-1.4
82,486	-				+0.3
82,486	-				-0.8
82,522	+				-2.3
82,522	+				-2.8
82,522	+				-1.4
82,522	+				-2.9
82,522	+				-0.8
82,522	+				+2.0
82,522	+				-3.8
82,522	+				-1.2
82,523	-				+0.6
82,523	-				+0.7
82,523	-				+0.1
82,524	+				-0.9
82,580	-				-0.7
82,588	-				+0.2
82,588	-				-0.3
82,663	+				-0.5
82,663	+				+0.9
82,663	+				-1.5
82,663	+				-1.7
82,663	+				-0.3
82,664	-				-2.2
82,664	-				-0.1
82,665	+				-0.5
82,665	+				-1.0
82,665	+				+0.6
82,665	+				+0.3
82,665	+				+0.8
82,665	+				-0.0
82,665	+				+0.4
82,665	+				-0.2
82,665	+				+1.5
82,665	+				-1.5
82,665	+				-0.2
82,665	+				-0.5
82,665	+				-0.6
82,665	+				-1.3
82,665	+				+0.4
82,665	+				-0.1
82,665	+				-0.3
82,665	+				-1.0
82,666	-				-0.6
82,666	-				-0.9
82,666	-				-0.8
82,666	-				-1.5
82,666	-				-0.7
82,666	-				+0.5
82,666	-				-0.2
82,666	-				+0.5
82,666	-				+0.8
82,666	-				-0.8
82,666	-				+0.1
82,666	-				+0.0
82,666	-				+0.3
82,666	-				+1.0
82,666	-				+1.0
82,666	-				+1.2
82,666	-				+0.4
82,666	-				-1.6
82,666	-				-0.7
82,666	-				+0.7
82,666	-				-0.1
82,666	-				-0.0
82,666	-				-0.7
82,666	-				+1.0
82,666	-				-0.5
82,666	-				+0.0
82,669	+				-0.5
82,669	+				+0.4
82,669	+				+0.3
82,670	-				+0.9
82,670	-				-0.9
82,670	-				+0.4