Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3329 and Ac3H11_3330 overlap by 41 nucleotides Ac3H11_3330 and Ac3H11_3331 are separated by 5 nucleotides Ac3H11_3331 and Ac3H11_3332 are separated by 214 nucleotides
Ac3H11_3329 - Permease of the drug/metabolite transporter (DMT) superfamily, at 9,046 to 9,999
_3329
Ac3H11_3330 - hypothetical protein, at 9,959 to 10,117
_3330
Ac3H11_3331 - outermembrane protein, at 10,123 to 11,175
_3331
Ac3H11_3332 - Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129), at 11,390 to 13,330
_3332
Position (kb)
10
11
12 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 9.565 kb on + strand, within Ac3H11_3329 at 9.565 kb on + strand, within Ac3H11_3329 at 9.566 kb on - strand, within Ac3H11_3329 at 9.566 kb on - strand, within Ac3H11_3329 at 9.566 kb on - strand, within Ac3H11_3329 at 9.566 kb on - strand, within Ac3H11_3329 at 9.566 kb on - strand, within Ac3H11_3329 at 9.566 kb on - strand, within Ac3H11_3329 at 9.575 kb on - strand, within Ac3H11_3329 at 9.575 kb on - strand, within Ac3H11_3329 at 9.575 kb on - strand, within Ac3H11_3329 at 9.763 kb on + strand, within Ac3H11_3329 at 9.763 kb on + strand, within Ac3H11_3329 at 9.763 kb on + strand, within Ac3H11_3329 at 9.764 kb on - strand, within Ac3H11_3329 at 10.124 kb on + strand at 10.125 kb on - strand at 10.277 kb on + strand, within Ac3H11_3331 at 10.277 kb on + strand, within Ac3H11_3331 at 10.277 kb on + strand, within Ac3H11_3331 at 10.278 kb on - strand, within Ac3H11_3331 at 10.278 kb on - strand, within Ac3H11_3331 at 10.278 kb on - strand, within Ac3H11_3331 at 10.278 kb on - strand, within Ac3H11_3331 at 10.278 kb on - strand, within Ac3H11_3331 at 10.278 kb on - strand, within Ac3H11_3331 at 10.337 kb on + strand, within Ac3H11_3331 at 10.338 kb on - strand, within Ac3H11_3331 at 10.338 kb on - strand, within Ac3H11_3331 at 10.403 kb on + strand, within Ac3H11_3331 at 10.403 kb on + strand, within Ac3H11_3331 at 10.655 kb on + strand, within Ac3H11_3331 at 10.656 kb on - strand, within Ac3H11_3331 at 10.775 kb on + strand, within Ac3H11_3331 at 10.784 kb on + strand, within Ac3H11_3331 at 10.784 kb on + strand, within Ac3H11_3331 at 10.784 kb on + strand, within Ac3H11_3331 at 10.785 kb on - strand, within Ac3H11_3331 at 10.785 kb on - strand, within Ac3H11_3331 at 10.785 kb on - strand, within Ac3H11_3331 at 10.827 kb on - strand, within Ac3H11_3331 at 10.877 kb on + strand, within Ac3H11_3331 at 11.036 kb on + strand, within Ac3H11_3331 at 11.037 kb on - strand, within Ac3H11_3331 at 11.037 kb on - strand, within Ac3H11_3331 at 11.328 kb on + strand at 11.328 kb on + strand at 11.328 kb on + strand at 11.328 kb on + strand at 11.329 kb on - strand at 11.329 kb on - strand at 11.338 kb on + strand at 11.338 kb on + strand at 11.338 kb on + strand at 11.339 kb on - strand at 11.339 kb on - strand at 11.339 kb on - strand at 11.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 9,565 + Ac3H11_3329 0.54 -0.1 9,565 + Ac3H11_3329 0.54 -0.3 9,566 - Ac3H11_3329 0.55 -0.0 9,566 - Ac3H11_3329 0.55 +1.1 9,566 - Ac3H11_3329 0.55 +1.0 9,566 - Ac3H11_3329 0.55 -0.1 9,566 - Ac3H11_3329 0.55 +0.0 9,566 - Ac3H11_3329 0.55 -0.5 9,575 - Ac3H11_3329 0.55 -1.7 9,575 - Ac3H11_3329 0.55 -0.5 9,575 - Ac3H11_3329 0.55 +0.1 9,763 + Ac3H11_3329 0.75 -2.2 9,763 + Ac3H11_3329 0.75 +1.0 9,763 + Ac3H11_3329 0.75 -1.3 9,764 - Ac3H11_3329 0.75 +1.1 10,124 + -0.4 10,125 - +1.1 10,277 + Ac3H11_3331 0.15 +1.3 10,277 + Ac3H11_3331 0.15 -0.3 10,277 + Ac3H11_3331 0.15 -0.4 10,278 - Ac3H11_3331 0.15 +1.4 10,278 - Ac3H11_3331 0.15 -0.2 10,278 - Ac3H11_3331 0.15 -0.6 10,278 - Ac3H11_3331 0.15 -0.6 10,278 - Ac3H11_3331 0.15 +0.1 10,278 - Ac3H11_3331 0.15 -1.2 10,337 + Ac3H11_3331 0.20 +0.8 10,338 - Ac3H11_3331 0.20 -0.1 10,338 - Ac3H11_3331 0.20 -0.9 10,403 + Ac3H11_3331 0.27 -0.6 10,403 + Ac3H11_3331 0.27 -1.9 10,655 + Ac3H11_3331 0.51 -0.3 10,656 - Ac3H11_3331 0.51 +0.5 10,775 + Ac3H11_3331 0.62 -0.5 10,784 + Ac3H11_3331 0.63 -0.2 10,784 + Ac3H11_3331 0.63 +0.4 10,784 + Ac3H11_3331 0.63 -0.0 10,785 - Ac3H11_3331 0.63 +0.1 10,785 - Ac3H11_3331 0.63 +0.0 10,785 - Ac3H11_3331 0.63 -0.0 10,827 - Ac3H11_3331 0.67 -0.6 10,877 + Ac3H11_3331 0.72 -0.3 11,036 + Ac3H11_3331 0.87 -0.9 11,037 - Ac3H11_3331 0.87 +0.2 11,037 - Ac3H11_3331 0.87 -0.9 11,328 + -0.2 11,328 + -0.1 11,328 + +0.3 11,328 + +0.7 11,329 - -0.0 11,329 - -1.1 11,338 + -0.3 11,338 + +0.2 11,338 + +0.4 11,339 - -1.2 11,339 - +1.9 11,339 - -0.4 11,339 - +0.8
Or see this region's nucleotide sequence