Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3165 and Ac3H11_3166 are separated by 317 nucleotides Ac3H11_3166 and Ac3H11_3167 are separated by 71 nucleotides
Ac3H11_3165 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 66,536 to 69,196
_3165
Ac3H11_3166 - HD domain protein, at 69,514 to 70,398
_3166
Ac3H11_3167 - Signal transduction histidine kinase, at 70,470 to 71,399
_3167
Position (kb)
69
70
71 Strain fitness (log2 ratio)
-1
0
1
2 at 68.536 kb on + strand, within Ac3H11_3165 at 68.536 kb on + strand, within Ac3H11_3165 at 68.537 kb on - strand, within Ac3H11_3165 at 68.537 kb on - strand, within Ac3H11_3165 at 68.537 kb on - strand, within Ac3H11_3165 at 68.586 kb on - strand, within Ac3H11_3165 at 68.593 kb on + strand, within Ac3H11_3165 at 68.618 kb on + strand, within Ac3H11_3165 at 68.665 kb on - strand, within Ac3H11_3165 at 68.667 kb on - strand, within Ac3H11_3165 at 68.850 kb on + strand, within Ac3H11_3165 at 68.851 kb on - strand, within Ac3H11_3165 at 69.024 kb on + strand at 69.114 kb on + strand at 69.153 kb on + strand at 69.153 kb on + strand at 69.154 kb on - strand at 69.295 kb on + strand at 69.295 kb on + strand at 69.296 kb on - strand at 69.296 kb on - strand at 69.296 kb on - strand at 69.296 kb on - strand at 69.405 kb on + strand at 69.406 kb on - strand at 69.423 kb on + strand at 69.424 kb on - strand at 69.429 kb on - strand at 69.429 kb on - strand at 69.429 kb on - strand at 69.497 kb on + strand at 69.497 kb on + strand at 69.497 kb on + strand at 69.498 kb on - strand at 69.498 kb on - strand at 69.548 kb on + strand at 69.548 kb on + strand at 69.608 kb on + strand, within Ac3H11_3166 at 69.608 kb on + strand, within Ac3H11_3166 at 69.609 kb on - strand, within Ac3H11_3166 at 69.710 kb on + strand, within Ac3H11_3166 at 69.710 kb on + strand, within Ac3H11_3166 at 69.710 kb on + strand, within Ac3H11_3166 at 69.728 kb on - strand, within Ac3H11_3166 at 69.750 kb on + strand, within Ac3H11_3166 at 69.751 kb on - strand, within Ac3H11_3166 at 69.751 kb on - strand, within Ac3H11_3166 at 69.791 kb on + strand, within Ac3H11_3166 at 69.792 kb on - strand, within Ac3H11_3166 at 69.792 kb on - strand, within Ac3H11_3166 at 69.840 kb on - strand, within Ac3H11_3166 at 69.840 kb on - strand, within Ac3H11_3166 at 69.840 kb on - strand, within Ac3H11_3166 at 70.074 kb on - strand, within Ac3H11_3166 at 70.242 kb on - strand, within Ac3H11_3166 at 70.373 kb on + strand at 70.373 kb on + strand at 70.373 kb on + strand at 70.373 kb on + strand at 70.374 kb on - strand at 70.374 kb on - strand at 70.403 kb on + strand at 70.403 kb on + strand at 70.403 kb on + strand at 70.404 kb on - strand at 70.404 kb on - strand at 70.404 kb on - strand at 70.448 kb on + strand at 70.448 kb on + strand at 70.448 kb on + strand at 70.448 kb on + strand at 70.448 kb on + strand at 70.449 kb on - strand at 70.449 kb on - strand at 70.449 kb on - strand at 70.449 kb on - strand at 70.535 kb on + strand at 70.536 kb on - strand at 70.695 kb on + strand, within Ac3H11_3167 at 70.695 kb on + strand, within Ac3H11_3167 at 70.695 kb on + strand, within Ac3H11_3167 at 70.696 kb on - strand, within Ac3H11_3167 at 70.696 kb on - strand, within Ac3H11_3167 at 70.708 kb on + strand, within Ac3H11_3167 at 70.729 kb on - strand, within Ac3H11_3167 at 70.729 kb on - strand, within Ac3H11_3167 at 70.729 kb on - strand, within Ac3H11_3167 at 70.790 kb on + strand, within Ac3H11_3167 at 70.791 kb on - strand, within Ac3H11_3167 at 70.791 kb on - strand, within Ac3H11_3167 at 70.809 kb on + strand, within Ac3H11_3167 at 70.858 kb on + strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.859 kb on - strand, within Ac3H11_3167 at 70.989 kb on + strand, within Ac3H11_3167 at 71.013 kb on + strand, within Ac3H11_3167 at 71.014 kb on - strand, within Ac3H11_3167 at 71.014 kb on - strand, within Ac3H11_3167 at 71.014 kb on - strand, within Ac3H11_3167 at 71.062 kb on + strand, within Ac3H11_3167 at 71.062 kb on + strand, within Ac3H11_3167 at 71.062 kb on + strand, within Ac3H11_3167 at 71.062 kb on + strand, within Ac3H11_3167 at 71.063 kb on - strand, within Ac3H11_3167 at 71.099 kb on + strand, within Ac3H11_3167 at 71.100 kb on - strand, within Ac3H11_3167 at 71.258 kb on - strand, within Ac3H11_3167 at 71.275 kb on - strand, within Ac3H11_3167 at 71.275 kb on - strand, within Ac3H11_3167 at 71.275 kb on - strand, within Ac3H11_3167 at 71.311 kb on + strand at 71.311 kb on + strand at 71.311 kb on + strand at 71.312 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 68,536 + Ac3H11_3165 0.75 +1.1 68,536 + Ac3H11_3165 0.75 -0.3 68,537 - Ac3H11_3165 0.75 +0.8 68,537 - Ac3H11_3165 0.75 +0.3 68,537 - Ac3H11_3165 0.75 -0.2 68,586 - Ac3H11_3165 0.77 +0.5 68,593 + Ac3H11_3165 0.77 -1.1 68,618 + Ac3H11_3165 0.78 +0.4 68,665 - Ac3H11_3165 0.80 -0.2 68,667 - Ac3H11_3165 0.80 +0.6 68,850 + Ac3H11_3165 0.87 +1.1 68,851 - Ac3H11_3165 0.87 +0.4 69,024 + +0.1 69,114 + -0.9 69,153 + -0.0 69,153 + +1.0 69,154 - +0.2 69,295 + -0.2 69,295 + -0.1 69,296 - -0.5 69,296 - +0.7 69,296 - -0.2 69,296 - +1.3 69,405 + -0.3 69,406 - +0.3 69,423 + -0.1 69,424 - -0.3 69,429 - +0.1 69,429 - -0.0 69,429 - +0.1 69,497 + +0.4 69,497 + +0.4 69,497 + -0.6 69,498 - -0.6 69,498 - -0.1 69,548 + -0.1 69,548 + +1.3 69,608 + Ac3H11_3166 0.11 -0.1 69,608 + Ac3H11_3166 0.11 -0.4 69,609 - Ac3H11_3166 0.11 +0.1 69,710 + Ac3H11_3166 0.22 -0.5 69,710 + Ac3H11_3166 0.22 +1.1 69,710 + Ac3H11_3166 0.22 +0.6 69,728 - Ac3H11_3166 0.24 -1.5 69,750 + Ac3H11_3166 0.27 +1.2 69,751 - Ac3H11_3166 0.27 +0.4 69,751 - Ac3H11_3166 0.27 +0.2 69,791 + Ac3H11_3166 0.31 -0.1 69,792 - Ac3H11_3166 0.31 -0.7 69,792 - Ac3H11_3166 0.31 -0.2 69,840 - Ac3H11_3166 0.37 +0.0 69,840 - Ac3H11_3166 0.37 -1.5 69,840 - Ac3H11_3166 0.37 +0.1 70,074 - Ac3H11_3166 0.63 -0.1 70,242 - Ac3H11_3166 0.82 +1.8 70,373 + -0.4 70,373 + -0.5 70,373 + -0.1 70,373 + +0.1 70,374 - -1.4 70,374 - -0.8 70,403 + -0.2 70,403 + -0.6 70,403 + +0.0 70,404 - +0.3 70,404 - +0.6 70,404 - +1.2 70,448 + -0.1 70,448 + -0.1 70,448 + -1.2 70,448 + -1.2 70,448 + -0.9 70,449 - +0.6 70,449 - -0.5 70,449 - +0.5 70,449 - +0.4 70,535 + +0.0 70,536 - -0.2 70,695 + Ac3H11_3167 0.24 -0.1 70,695 + Ac3H11_3167 0.24 +1.2 70,695 + Ac3H11_3167 0.24 +1.2 70,696 - Ac3H11_3167 0.24 -0.1 70,696 - Ac3H11_3167 0.24 -0.9 70,708 + Ac3H11_3167 0.26 +0.5 70,729 - Ac3H11_3167 0.28 +0.0 70,729 - Ac3H11_3167 0.28 -0.2 70,729 - Ac3H11_3167 0.28 -1.3 70,790 + Ac3H11_3167 0.34 +0.2 70,791 - Ac3H11_3167 0.35 -0.6 70,791 - Ac3H11_3167 0.35 -1.5 70,809 + Ac3H11_3167 0.36 -0.6 70,858 + Ac3H11_3167 0.42 -1.0 70,859 - Ac3H11_3167 0.42 +0.3 70,859 - Ac3H11_3167 0.42 +0.7 70,859 - Ac3H11_3167 0.42 -0.3 70,859 - Ac3H11_3167 0.42 +0.9 70,859 - Ac3H11_3167 0.42 +1.5 70,859 - Ac3H11_3167 0.42 +0.4 70,859 - Ac3H11_3167 0.42 +1.2 70,859 - Ac3H11_3167 0.42 +0.2 70,989 + Ac3H11_3167 0.56 +0.3 71,013 + Ac3H11_3167 0.58 -0.1 71,014 - Ac3H11_3167 0.58 +0.1 71,014 - Ac3H11_3167 0.58 +1.4 71,014 - Ac3H11_3167 0.58 +0.5 71,062 + Ac3H11_3167 0.64 +0.2 71,062 + Ac3H11_3167 0.64 +0.9 71,062 + Ac3H11_3167 0.64 +0.9 71,062 + Ac3H11_3167 0.64 +0.9 71,063 - Ac3H11_3167 0.64 +0.2 71,099 + Ac3H11_3167 0.68 +1.6 71,100 - Ac3H11_3167 0.68 +1.7 71,258 - Ac3H11_3167 0.85 +0.7 71,275 - Ac3H11_3167 0.87 +0.1 71,275 - Ac3H11_3167 0.87 +0.6 71,275 - Ac3H11_3167 0.87 +0.7 71,311 + -0.0 71,311 + +0.8 71,311 + -0.4 71,312 - +0.4
Or see this region's nucleotide sequence