Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_27 and Ac3H11_28 are separated by 173 nucleotides Ac3H11_28 and Ac3H11_29 are separated by 198 nucleotides Ac3H11_29 and Ac3H11_30 are separated by 30 nucleotides
Ac3H11_27 - Glutaminyl-tRNA synthetase (EC 6.1.1.18), at 24,246 to 26,084
_27
Ac3H11_28 - Virulence protein, at 26,258 to 26,599
_28
Ac3H11_29 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 26,798 to 27,274
_29
Ac3H11_30 - Hypothetical protein YaeJ with similarity to translation release factor, at 27,305 to 27,718
_30
Position (kb) 26
27 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 26.095 kb on + strand at 26.096 kb on - strand at 26.125 kb on + strand at 26.125 kb on + strand at 26.125 kb on + strand at 26.125 kb on + strand at 26.126 kb on - strand at 26.126 kb on - strand at 26.140 kb on + strand at 26.140 kb on + strand at 26.140 kb on + strand at 26.140 kb on + strand at 26.141 kb on - strand at 26.141 kb on - strand at 26.141 kb on - strand at 26.157 kb on + strand at 26.157 kb on + strand at 26.157 kb on + strand at 26.157 kb on + strand at 26.157 kb on + strand at 26.157 kb on + strand at 26.157 kb on + strand at 26.157 kb on + strand at 26.158 kb on - strand at 26.158 kb on - strand at 26.158 kb on - strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.169 kb on + strand at 26.170 kb on - strand at 26.170 kb on - strand at 26.170 kb on - strand at 26.170 kb on - strand at 26.170 kb on - strand at 26.186 kb on + strand at 26.186 kb on + strand at 26.186 kb on + strand at 26.186 kb on + strand at 26.186 kb on + strand at 26.186 kb on + strand at 26.186 kb on + strand at 26.187 kb on - strand at 26.187 kb on - strand at 26.187 kb on - strand at 26.203 kb on - strand at 26.243 kb on + strand at 26.243 kb on + strand at 26.243 kb on + strand at 26.243 kb on + strand at 26.244 kb on - strand at 26.279 kb on + strand at 26.279 kb on + strand at 26.279 kb on + strand at 26.408 kb on + strand, within Ac3H11_28 at 26.408 kb on + strand, within Ac3H11_28 at 26.409 kb on - strand, within Ac3H11_28 at 26.409 kb on - strand, within Ac3H11_28 at 26.409 kb on - strand, within Ac3H11_28 at 26.409 kb on - strand, within Ac3H11_28 at 26.409 kb on - strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.411 kb on + strand, within Ac3H11_28 at 26.412 kb on - strand, within Ac3H11_28 at 26.412 kb on - strand, within Ac3H11_28 at 26.412 kb on - strand, within Ac3H11_28 at 26.412 kb on - strand, within Ac3H11_28 at 26.412 kb on - strand, within Ac3H11_28 at 26.412 kb on - strand, within Ac3H11_28 at 26.412 kb on - strand, within Ac3H11_28 at 26.429 kb on + strand, within Ac3H11_28 at 26.429 kb on + strand, within Ac3H11_28 at 26.429 kb on + strand, within Ac3H11_28 at 26.429 kb on + strand, within Ac3H11_28 at 26.429 kb on + strand, within Ac3H11_28 at 26.430 kb on - strand, within Ac3H11_28 at 26.430 kb on - strand, within Ac3H11_28 at 26.430 kb on - strand, within Ac3H11_28 at 26.453 kb on + strand, within Ac3H11_28 at 26.453 kb on + strand, within Ac3H11_28 at 26.453 kb on + strand, within Ac3H11_28 at 26.453 kb on + strand, within Ac3H11_28 at 26.453 kb on + strand, within Ac3H11_28 at 26.453 kb on + strand, within Ac3H11_28 at 26.453 kb on + strand, within Ac3H11_28 at 26.454 kb on - strand, within Ac3H11_28 at 26.454 kb on - strand, within Ac3H11_28 at 26.454 kb on - strand, within Ac3H11_28 at 26.456 kb on + strand, within Ac3H11_28 at 26.456 kb on + strand, within Ac3H11_28 at 26.457 kb on - strand, within Ac3H11_28 at 26.477 kb on + strand, within Ac3H11_28 at 26.477 kb on + strand, within Ac3H11_28 at 26.477 kb on + strand, within Ac3H11_28 at 26.477 kb on + strand, within Ac3H11_28 at 26.478 kb on - strand, within Ac3H11_28 at 26.478 kb on - strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.480 kb on + strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.481 kb on - strand, within Ac3H11_28 at 26.498 kb on + strand, within Ac3H11_28 at 26.498 kb on + strand, within Ac3H11_28 at 26.498 kb on + strand, within Ac3H11_28 at 26.498 kb on + strand, within Ac3H11_28 at 26.498 kb on + strand, within Ac3H11_28 at 26.498 kb on + strand, within Ac3H11_28 at 26.498 kb on + strand, within Ac3H11_28 at 26.499 kb on - strand, within Ac3H11_28 at 26.499 kb on - strand, within Ac3H11_28 at 26.499 kb on - strand, within Ac3H11_28 at 26.501 kb on + strand, within Ac3H11_28 at 26.501 kb on + strand, within Ac3H11_28 at 26.502 kb on - strand, within Ac3H11_28 at 26.502 kb on - strand, within Ac3H11_28 at 26.522 kb on + strand, within Ac3H11_28 at 26.522 kb on + strand, within Ac3H11_28 at 26.522 kb on + strand, within Ac3H11_28 at 26.523 kb on - strand, within Ac3H11_28 at 26.523 kb on - strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.525 kb on + strand, within Ac3H11_28 at 26.526 kb on - strand, within Ac3H11_28 at 26.526 kb on - strand, within Ac3H11_28 at 26.526 kb on - strand, within Ac3H11_28 at 26.526 kb on - strand, within Ac3H11_28 at 26.682 kb on + strand at 26.683 kb on - strand at 26.683 kb on - strand at 26.710 kb on - strand at 26.710 kb on - strand at 26.741 kb on + strand at 26.741 kb on + strand at 26.741 kb on + strand at 26.742 kb on - strand at 26.809 kb on + strand at 26.809 kb on + strand at 26.810 kb on - strand at 26.874 kb on - strand, within Ac3H11_29 at 26.874 kb on - strand, within Ac3H11_29 at 26.874 kb on - strand, within Ac3H11_29 at 26.936 kb on + strand, within Ac3H11_29 at 26.936 kb on + strand, within Ac3H11_29 at 26.937 kb on - strand, within Ac3H11_29 at 27.053 kb on + strand, within Ac3H11_29 at 27.053 kb on + strand, within Ac3H11_29 at 27.053 kb on + strand, within Ac3H11_29 at 27.053 kb on + strand, within Ac3H11_29 at 27.053 kb on + strand, within Ac3H11_29 at 27.054 kb on - strand, within Ac3H11_29 at 27.054 kb on - strand, within Ac3H11_29 at 27.054 kb on - strand, within Ac3H11_29 at 27.054 kb on - strand, within Ac3H11_29 at 27.054 kb on - strand, within Ac3H11_29 at 27.054 kb on - strand, within Ac3H11_29 at 27.054 kb on - strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.164 kb on + strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.165 kb on - strand, within Ac3H11_29 at 27.215 kb on + strand, within Ac3H11_29 at 27.215 kb on + strand, within Ac3H11_29 at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.298 kb on + strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.299 kb on - strand at 27.304 kb on + strand at 27.304 kb on + strand at 27.304 kb on + strand at 27.305 kb on - strand at 27.305 kb on - strand at 27.305 kb on - strand at 27.305 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 26,095 + +1.0 26,096 - -0.8 26,125 + -1.9 26,125 + -1.2 26,125 + -1.2 26,125 + -1.0 26,126 - +0.3 26,126 - -0.0 26,140 + -1.7 26,140 + +0.4 26,140 + -1.3 26,140 + -1.2 26,141 - +1.5 26,141 - +0.0 26,141 - +0.2 26,157 + +0.3 26,157 + -0.6 26,157 + -0.3 26,157 + -1.5 26,157 + +0.4 26,157 + -1.8 26,157 + -0.1 26,157 + -0.1 26,158 - -0.3 26,158 - -1.0 26,158 - +0.7 26,169 + +0.0 26,169 + -0.5 26,169 + -1.0 26,169 + -0.1 26,169 + -0.1 26,169 + -0.3 26,169 + +0.7 26,169 + +0.4 26,169 + -0.1 26,170 - -0.7 26,170 - -0.0 26,170 - -0.8 26,170 - +0.4 26,170 - -0.2 26,186 + -0.1 26,186 + -0.5 26,186 + +0.2 26,186 + -1.6 26,186 + -1.0 26,186 + -0.9 26,186 + -0.5 26,187 - -0.9 26,187 - -0.0 26,187 - +0.4 26,203 - -0.4 26,243 + -0.4 26,243 + +0.2 26,243 + -0.3 26,243 + -0.0 26,244 - +0.6 26,279 + -0.3 26,279 + +0.0 26,279 + -1.2 26,408 + Ac3H11_28 0.44 -0.6 26,408 + Ac3H11_28 0.44 +0.6 26,409 - Ac3H11_28 0.44 +0.5 26,409 - Ac3H11_28 0.44 -1.1 26,409 - Ac3H11_28 0.44 -1.0 26,409 - Ac3H11_28 0.44 +1.3 26,409 - Ac3H11_28 0.44 -0.6 26,411 + Ac3H11_28 0.45 -0.0 26,411 + Ac3H11_28 0.45 -0.4 26,411 + Ac3H11_28 0.45 -0.5 26,411 + Ac3H11_28 0.45 -0.3 26,411 + Ac3H11_28 0.45 -0.1 26,411 + Ac3H11_28 0.45 -0.8 26,411 + Ac3H11_28 0.45 +1.2 26,411 + Ac3H11_28 0.45 -1.0 26,412 - Ac3H11_28 0.45 -0.3 26,412 - Ac3H11_28 0.45 +0.7 26,412 - Ac3H11_28 0.45 -1.0 26,412 - Ac3H11_28 0.45 +0.4 26,412 - Ac3H11_28 0.45 +0.3 26,412 - Ac3H11_28 0.45 -0.3 26,412 - Ac3H11_28 0.45 -1.3 26,429 + Ac3H11_28 0.50 -0.1 26,429 + Ac3H11_28 0.50 +0.6 26,429 + Ac3H11_28 0.50 +0.1 26,429 + Ac3H11_28 0.50 +0.1 26,429 + Ac3H11_28 0.50 +0.2 26,430 - Ac3H11_28 0.50 +0.2 26,430 - Ac3H11_28 0.50 -0.5 26,430 - Ac3H11_28 0.50 +0.1 26,453 + Ac3H11_28 0.57 +0.3 26,453 + Ac3H11_28 0.57 -0.0 26,453 + Ac3H11_28 0.57 -1.2 26,453 + Ac3H11_28 0.57 -0.4 26,453 + Ac3H11_28 0.57 -0.1 26,453 + Ac3H11_28 0.57 +0.4 26,453 + Ac3H11_28 0.57 -0.3 26,454 - Ac3H11_28 0.57 -0.4 26,454 - Ac3H11_28 0.57 -0.6 26,454 - Ac3H11_28 0.57 +0.3 26,456 + Ac3H11_28 0.58 +0.3 26,456 + Ac3H11_28 0.58 -0.1 26,457 - Ac3H11_28 0.58 +0.1 26,477 + Ac3H11_28 0.64 -0.2 26,477 + Ac3H11_28 0.64 -0.3 26,477 + Ac3H11_28 0.64 +0.3 26,477 + Ac3H11_28 0.64 +0.3 26,478 - Ac3H11_28 0.64 -0.6 26,478 - Ac3H11_28 0.64 -0.8 26,480 + Ac3H11_28 0.65 -2.1 26,480 + Ac3H11_28 0.65 -1.0 26,480 + Ac3H11_28 0.65 -0.2 26,480 + Ac3H11_28 0.65 -0.2 26,480 + Ac3H11_28 0.65 -0.2 26,480 + Ac3H11_28 0.65 -0.3 26,480 + Ac3H11_28 0.65 +0.1 26,480 + Ac3H11_28 0.65 -1.2 26,480 + Ac3H11_28 0.65 -0.0 26,480 + Ac3H11_28 0.65 +0.2 26,480 + Ac3H11_28 0.65 -0.7 26,480 + Ac3H11_28 0.65 +0.8 26,480 + Ac3H11_28 0.65 -0.2 26,480 + Ac3H11_28 0.65 -1.3 26,480 + Ac3H11_28 0.65 +0.1 26,480 + Ac3H11_28 0.65 +0.5 26,480 + Ac3H11_28 0.65 -0.2 26,481 - Ac3H11_28 0.65 +0.7 26,481 - Ac3H11_28 0.65 +0.4 26,481 - Ac3H11_28 0.65 -0.3 26,481 - Ac3H11_28 0.65 +0.1 26,481 - Ac3H11_28 0.65 +0.5 26,481 - Ac3H11_28 0.65 -0.9 26,481 - Ac3H11_28 0.65 -0.0 26,481 - Ac3H11_28 0.65 +0.4 26,498 + Ac3H11_28 0.70 +0.6 26,498 + Ac3H11_28 0.70 +0.6 26,498 + Ac3H11_28 0.70 +0.4 26,498 + Ac3H11_28 0.70 -1.0 26,498 + Ac3H11_28 0.70 -0.5 26,498 + Ac3H11_28 0.70 +0.9 26,498 + Ac3H11_28 0.70 -0.0 26,499 - Ac3H11_28 0.70 +0.1 26,499 - Ac3H11_28 0.70 +0.5 26,499 - Ac3H11_28 0.70 +0.4 26,501 + Ac3H11_28 0.71 +0.0 26,501 + Ac3H11_28 0.71 +1.0 26,502 - Ac3H11_28 0.71 -1.1 26,502 - Ac3H11_28 0.71 -1.4 26,522 + Ac3H11_28 0.77 -0.8 26,522 + Ac3H11_28 0.77 +0.7 26,522 + Ac3H11_28 0.77 -0.0 26,523 - Ac3H11_28 0.77 +0.9 26,523 - Ac3H11_28 0.77 -0.1 26,525 + Ac3H11_28 0.78 -0.3 26,525 + Ac3H11_28 0.78 -0.7 26,525 + Ac3H11_28 0.78 +0.4 26,525 + Ac3H11_28 0.78 +0.1 26,525 + Ac3H11_28 0.78 -0.8 26,525 + Ac3H11_28 0.78 -0.9 26,525 + Ac3H11_28 0.78 -1.9 26,525 + Ac3H11_28 0.78 -0.2 26,525 + Ac3H11_28 0.78 +0.0 26,525 + Ac3H11_28 0.78 -0.1 26,526 - Ac3H11_28 0.78 -0.3 26,526 - Ac3H11_28 0.78 +0.7 26,526 - Ac3H11_28 0.78 -0.2 26,526 - Ac3H11_28 0.78 -0.2 26,682 + -0.2 26,683 - -1.1 26,683 - -0.2 26,710 - +0.3 26,710 - -0.2 26,741 + +0.0 26,741 + -0.2 26,741 + -0.0 26,742 - -1.3 26,809 + -3.2 26,809 + -1.5 26,810 - -1.8 26,874 - Ac3H11_29 0.16 -2.6 26,874 - Ac3H11_29 0.16 -3.1 26,874 - Ac3H11_29 0.16 -4.2 26,936 + Ac3H11_29 0.29 -3.4 26,936 + Ac3H11_29 0.29 -1.8 26,937 - Ac3H11_29 0.29 -3.0 27,053 + Ac3H11_29 0.53 -3.2 27,053 + Ac3H11_29 0.53 -3.4 27,053 + Ac3H11_29 0.53 -1.9 27,053 + Ac3H11_29 0.53 -1.2 27,053 + Ac3H11_29 0.53 -1.7 27,054 - Ac3H11_29 0.54 -3.4 27,054 - Ac3H11_29 0.54 -1.2 27,054 - Ac3H11_29 0.54 -2.5 27,054 - Ac3H11_29 0.54 -1.3 27,054 - Ac3H11_29 0.54 -3.1 27,054 - Ac3H11_29 0.54 -2.4 27,054 - Ac3H11_29 0.54 -3.2 27,164 + Ac3H11_29 0.77 -1.9 27,164 + Ac3H11_29 0.77 -3.0 27,164 + Ac3H11_29 0.77 -2.8 27,164 + Ac3H11_29 0.77 -2.8 27,164 + Ac3H11_29 0.77 -3.4 27,164 + Ac3H11_29 0.77 -1.2 27,164 + Ac3H11_29 0.77 -1.9 27,164 + Ac3H11_29 0.77 -3.2 27,164 + Ac3H11_29 0.77 -3.2 27,164 + Ac3H11_29 0.77 -3.2 27,164 + Ac3H11_29 0.77 -4.1 27,164 + Ac3H11_29 0.77 -1.6 27,164 + Ac3H11_29 0.77 -3.4 27,164 + Ac3H11_29 0.77 -1.1 27,165 - Ac3H11_29 0.77 -2.5 27,165 - Ac3H11_29 0.77 -1.8 27,165 - Ac3H11_29 0.77 -2.0 27,165 - Ac3H11_29 0.77 -2.7 27,165 - Ac3H11_29 0.77 -1.8 27,165 - Ac3H11_29 0.77 -3.9 27,165 - Ac3H11_29 0.77 -1.8 27,165 - Ac3H11_29 0.77 -1.5 27,165 - Ac3H11_29 0.77 -3.2 27,165 - Ac3H11_29 0.77 -3.2 27,165 - Ac3H11_29 0.77 -0.8 27,165 - Ac3H11_29 0.77 -3.3 27,165 - Ac3H11_29 0.77 -1.6 27,165 - Ac3H11_29 0.77 -1.3 27,215 + Ac3H11_29 0.87 -3.6 27,215 + Ac3H11_29 0.87 -3.2 27,298 + +0.7 27,298 + -0.7 27,298 + -2.3 27,298 + -1.3 27,298 + -0.2 27,298 + +1.5 27,298 + -0.4 27,298 + -0.7 27,298 + -0.3 27,298 + +0.4 27,299 - -2.2 27,299 - +1.5 27,299 - -0.1 27,299 - +0.5 27,299 - -0.5 27,299 - +0.2 27,299 - +0.2 27,299 - -0.5 27,299 - +0.1 27,299 - -0.4 27,304 + -0.6 27,304 + +0.2 27,304 + -0.9 27,305 - -0.4 27,305 - +0.4 27,305 - +0.0 27,305 - -0.9
Or see this region's nucleotide sequence