Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2026

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2024 and Ac3H11_2025 are separated by 7 nucleotidesAc3H11_2025 and Ac3H11_2026 are separated by 104 nucleotidesAc3H11_2026 and Ac3H11_2027 overlap by 21 nucleotides Ac3H11_2024 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108), at 244,321 to 245,244 _2024 Ac3H11_2025 - hypothetical protein, at 245,252 to 245,428 _2025 Ac3H11_2026 - hypothetical protein, at 245,533 to 245,739 _2026 Ac3H11_2027 - Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17), at 245,719 to 247,635 _2027 Position (kb) 245 246Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 245.315 kb on + strand, within Ac3H11_2025at 245.316 kb on - strand, within Ac3H11_2025at 245.316 kb on - strand, within Ac3H11_2025at 245.339 kb on + strand, within Ac3H11_2025at 245.339 kb on + strand, within Ac3H11_2025at 245.340 kb on - strand, within Ac3H11_2025at 245.340 kb on - strand, within Ac3H11_2025at 245.340 kb on - strand, within Ac3H11_2025at 245.340 kb on - strand, within Ac3H11_2025at 245.341 kb on + strand, within Ac3H11_2025at 245.341 kb on + strand, within Ac3H11_2025at 245.341 kb on + strand, within Ac3H11_2025at 245.342 kb on - strand, within Ac3H11_2025at 245.342 kb on - strand, within Ac3H11_2025at 245.342 kb on - strand, within Ac3H11_2025at 245.342 kb on - strand, within Ac3H11_2025at 245.473 kb on + strandat 245.473 kb on + strandat 245.473 kb on + strandat 245.474 kb on - strandat 245.474 kb on - strandat 245.475 kb on + strandat 245.475 kb on + strandat 245.476 kb on - strandat 245.476 kb on - strandat 245.818 kb on + strandat 245.818 kb on + strandat 245.818 kb on + strandat 245.818 kb on + strandat 245.818 kb on + strandat 245.819 kb on - strandat 245.819 kb on - strandat 245.819 kb on - strandat 245.819 kb on - strandat 245.819 kb on - strandat 245.819 kb on - strandat 245.899 kb on + strandat 245.900 kb on - strandat 245.900 kb on - strandat 245.900 kb on - strandat 245.917 kb on + strand, within Ac3H11_2027at 246.145 kb on - strand, within Ac3H11_2027at 246.163 kb on + strand, within Ac3H11_2027at 246.199 kb on + strand, within Ac3H11_2027at 246.199 kb on + strand, within Ac3H11_2027at 246.199 kb on + strand, within Ac3H11_2027at 246.199 kb on + strand, within Ac3H11_2027at 246.199 kb on + strand, within Ac3H11_2027at 246.200 kb on - strand, within Ac3H11_2027at 246.200 kb on - strand, within Ac3H11_2027at 246.200 kb on - strand, within Ac3H11_2027at 246.200 kb on - strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.244 kb on + strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.245 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.573 kb on - strand, within Ac3H11_2027at 246.610 kb on + strand, within Ac3H11_2027at 246.610 kb on + strand, within Ac3H11_2027at 246.610 kb on + strand, within Ac3H11_2027at 246.610 kb on + strand, within Ac3H11_2027at 246.611 kb on - strand, within Ac3H11_2027at 246.706 kb on + strand, within Ac3H11_2027at 246.706 kb on + strand, within Ac3H11_2027at 246.706 kb on + strand, within Ac3H11_2027at 246.706 kb on + strand, within Ac3H11_2027at 246.707 kb on - strand, within Ac3H11_2027at 246.707 kb on - strand, within Ac3H11_2027at 246.707 kb on - strand, within Ac3H11_2027at 246.707 kb on - strand, within Ac3H11_2027at 246.707 kb on - strand, within Ac3H11_2027at 246.739 kb on + strand, within Ac3H11_2027at 246.739 kb on + strand, within Ac3H11_2027at 246.739 kb on + strand, within Ac3H11_2027at 246.739 kb on + strand, within Ac3H11_2027at 246.739 kb on + strand, within Ac3H11_2027at 246.739 kb on + strand, within Ac3H11_2027at 246.739 kb on + strand, within Ac3H11_2027

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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245,315 + Ac3H11_2025 0.36 +0.3
245,316 - Ac3H11_2025 0.36 -0.5
245,316 - Ac3H11_2025 0.36 -0.7
245,339 + Ac3H11_2025 0.49 -0.3
245,339 + Ac3H11_2025 0.49 -0.2
245,340 - Ac3H11_2025 0.50 +0.0
245,340 - Ac3H11_2025 0.50 -0.1
245,340 - Ac3H11_2025 0.50 +0.6
245,340 - Ac3H11_2025 0.50 -0.6
245,341 + Ac3H11_2025 0.50 +0.3
245,341 + Ac3H11_2025 0.50 +0.0
245,341 + Ac3H11_2025 0.50 -0.2
245,342 - Ac3H11_2025 0.51 +0.2
245,342 - Ac3H11_2025 0.51 -1.0
245,342 - Ac3H11_2025 0.51 +0.0
245,342 - Ac3H11_2025 0.51 -1.2
245,473 + -0.1
245,473 + +0.7
245,473 + +0.6
245,474 - -0.9
245,474 - +0.9
245,475 + -0.3
245,475 + -1.2
245,476 - -1.9
245,476 - -2.2
245,818 + -1.7
245,818 + -1.8
245,818 + -2.8
245,818 + -1.0
245,818 + -2.7
245,819 - -1.1
245,819 - -0.8
245,819 - -1.4
245,819 - -3.9
245,819 - -2.6
245,819 - -4.1
245,899 + -2.8
245,900 - -1.3
245,900 - -1.8
245,900 - -4.4
245,917 + Ac3H11_2027 0.10 -4.0
246,145 - Ac3H11_2027 0.22 -1.6
246,163 + Ac3H11_2027 0.23 -2.8
246,199 + Ac3H11_2027 0.25 -2.5
246,199 + Ac3H11_2027 0.25 -4.1
246,199 + Ac3H11_2027 0.25 -3.5
246,199 + Ac3H11_2027 0.25 -3.2
246,199 + Ac3H11_2027 0.25 -0.6
246,200 - Ac3H11_2027 0.25 -3.1
246,200 - Ac3H11_2027 0.25 -4.4
246,200 - Ac3H11_2027 0.25 -2.9
246,200 - Ac3H11_2027 0.25 +0.1
246,244 + Ac3H11_2027 0.27 -1.8
246,244 + Ac3H11_2027 0.27 -3.3
246,244 + Ac3H11_2027 0.27 -3.0
246,244 + Ac3H11_2027 0.27 -3.4
246,244 + Ac3H11_2027 0.27 +0.9
246,244 + Ac3H11_2027 0.27 -2.9
246,244 + Ac3H11_2027 0.27 -2.1
246,244 + Ac3H11_2027 0.27 -3.5
246,244 + Ac3H11_2027 0.27 -3.2
246,244 + Ac3H11_2027 0.27 -4.0
246,244 + Ac3H11_2027 0.27 -0.1
246,244 + Ac3H11_2027 0.27 -2.2
246,244 + Ac3H11_2027 0.27 -1.8
246,245 - Ac3H11_2027 0.27 -3.1
246,245 - Ac3H11_2027 0.27 -3.7
246,245 - Ac3H11_2027 0.27 -1.2
246,245 - Ac3H11_2027 0.27 -1.6
246,245 - Ac3H11_2027 0.27 -2.2
246,245 - Ac3H11_2027 0.27 -1.4
246,245 - Ac3H11_2027 0.27 -3.1
246,245 - Ac3H11_2027 0.27 -3.0
246,245 - Ac3H11_2027 0.27 +0.3
246,245 - Ac3H11_2027 0.27 -1.3
246,245 - Ac3H11_2027 0.27 -1.7
246,245 - Ac3H11_2027 0.27 -2.3
246,245 - Ac3H11_2027 0.27 -3.8
246,245 - Ac3H11_2027 0.27 -4.5
246,573 - Ac3H11_2027 0.45 -2.0
246,573 - Ac3H11_2027 0.45 -1.9
246,573 - Ac3H11_2027 0.45 -3.8
246,573 - Ac3H11_2027 0.45 -1.8
246,573 - Ac3H11_2027 0.45 -1.8
246,573 - Ac3H11_2027 0.45 -1.3
246,573 - Ac3H11_2027 0.45 -2.7
246,573 - Ac3H11_2027 0.45 -1.8
246,610 + Ac3H11_2027 0.46 -1.6
246,610 + Ac3H11_2027 0.46 -1.8
246,610 + Ac3H11_2027 0.46 -1.9
246,610 + Ac3H11_2027 0.46 -1.1
246,611 - Ac3H11_2027 0.47 -2.0
246,706 + Ac3H11_2027 0.51 -2.6
246,706 + Ac3H11_2027 0.51 -0.1
246,706 + Ac3H11_2027 0.51 -1.0
246,706 + Ac3H11_2027 0.51 -1.8
246,707 - Ac3H11_2027 0.52 -1.7
246,707 - Ac3H11_2027 0.52 -2.6
246,707 - Ac3H11_2027 0.52 -1.4
246,707 - Ac3H11_2027 0.52 -3.3
246,707 - Ac3H11_2027 0.52 -3.0
246,739 + Ac3H11_2027 0.53 -3.8
246,739 + Ac3H11_2027 0.53 -3.5
246,739 + Ac3H11_2027 0.53 -3.3
246,739 + Ac3H11_2027 0.53 -4.1
246,739 + Ac3H11_2027 0.53 -3.2
246,739 + Ac3H11_2027 0.53 -3.2
246,739 + Ac3H11_2027 0.53 -0.4

Or see this region's nucleotide sequence