Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26830 and AO353_26835 are separated by 2 nucleotides AO353_26835 and AO353_26840 are separated by 275 nucleotides AO353_26840 and AO353_26845 are separated by 16 nucleotides
AO353_26830: AO353_26830 - histidine kinase, at 5,876,804 to 5,878,105
_26830
AO353_26835: AO353_26835 - transcriptional regulator, at 5,878,108 to 5,878,809
_26835
AO353_26840: AO353_26840 - RND transporter, at 5,879,085 to 5,880,242
_26840
AO353_26845: AO353_26845 - acriflavine resistance protein B, at 5,880,259 to 5,883,357
_26845
Position (kb)
5879
5880
5881 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5878.291 kb on + strand, within AO353_26835 at 5878.291 kb on + strand, within AO353_26835 at 5878.292 kb on - strand, within AO353_26835 at 5878.292 kb on - strand, within AO353_26835 at 5878.331 kb on + strand, within AO353_26835 at 5878.332 kb on - strand, within AO353_26835 at 5878.332 kb on - strand, within AO353_26835 at 5878.514 kb on + strand, within AO353_26835 at 5878.515 kb on - strand, within AO353_26835 at 5878.895 kb on - strand at 5878.911 kb on + strand at 5878.917 kb on + strand at 5878.917 kb on + strand at 5878.918 kb on - strand at 5878.918 kb on - strand at 5878.918 kb on - strand at 5878.964 kb on + strand at 5878.964 kb on + strand at 5878.964 kb on + strand at 5878.964 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.988 kb on + strand at 5878.988 kb on + strand at 5878.989 kb on - strand at 5878.989 kb on - strand at 5878.997 kb on + strand at 5878.997 kb on + strand at 5879.018 kb on + strand at 5879.018 kb on + strand at 5879.018 kb on + strand at 5879.019 kb on - strand at 5879.019 kb on - strand at 5879.019 kb on - strand at 5879.019 kb on - strand at 5879.054 kb on - strand at 5879.078 kb on + strand at 5879.078 kb on + strand at 5879.079 kb on - strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.499 kb on + strand, within AO353_26840 at 5879.500 kb on - strand, within AO353_26840 at 5879.835 kb on + strand, within AO353_26840 at 5879.836 kb on - strand, within AO353_26840 at 5879.991 kb on - strand, within AO353_26840 at 5880.194 kb on - strand at 5880.258 kb on + strand at 5880.259 kb on - strand at 5880.313 kb on - strand at 5880.394 kb on + strand at 5880.395 kb on - strand at 5880.395 kb on - strand at 5880.395 kb on - strand at 5880.395 kb on - strand at 5880.395 kb on - strand at 5880.488 kb on - strand at 5880.725 kb on - strand, within AO353_26845 at 5880.787 kb on + strand, within AO353_26845 at 5880.788 kb on - strand, within AO353_26845 at 5880.788 kb on - strand, within AO353_26845 at 5880.788 kb on - strand, within AO353_26845 at 5881.079 kb on - strand, within AO353_26845 at 5881.202 kb on - strand, within AO353_26845 at 5881.202 kb on - strand, within AO353_26845 at 5881.223 kb on - strand, within AO353_26845 at 5881.223 kb on - strand, within AO353_26845 at 5881.223 kb on - strand, within AO353_26845 at 5881.223 kb on - strand, within AO353_26845
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 5,878,291 + AO353_26835 0.26 -1.6 5,878,291 + AO353_26835 0.26 -0.2 5,878,292 - AO353_26835 0.26 -2.1 5,878,292 - AO353_26835 0.26 +0.1 5,878,331 + AO353_26835 0.32 -1.2 5,878,332 - AO353_26835 0.32 +0.4 5,878,332 - AO353_26835 0.32 -1.3 5,878,514 + AO353_26835 0.58 -0.1 5,878,515 - AO353_26835 0.58 +3.0 5,878,895 - -0.2 5,878,911 + -1.2 5,878,917 + +1.9 5,878,917 + -0.6 5,878,918 - +0.3 5,878,918 - +0.7 5,878,918 - +1.0 5,878,964 + -0.6 5,878,964 + -2.1 5,878,964 + -0.8 5,878,964 + -0.1 5,878,966 + +0.3 5,878,966 + +1.1 5,878,966 + -0.8 5,878,966 + -0.3 5,878,966 + +0.3 5,878,967 - +0.2 5,878,967 - -1.6 5,878,967 - +0.1 5,878,967 - +0.1 5,878,967 - +0.9 5,878,967 - -1.4 5,878,967 - -0.3 5,878,967 - -1.3 5,878,967 - +0.8 5,878,967 - +0.3 5,878,967 - -2.4 5,878,988 + +0.3 5,878,988 + +0.7 5,878,989 - -0.3 5,878,989 - -0.0 5,878,997 + -0.6 5,878,997 + -1.0 5,879,018 + +0.4 5,879,018 + +1.2 5,879,018 + -1.4 5,879,019 - +0.7 5,879,019 - -1.0 5,879,019 - -1.4 5,879,019 - -0.6 5,879,054 - -0.9 5,879,078 + -1.5 5,879,078 + +0.0 5,879,079 - -0.3 5,879,082 + -1.0 5,879,082 + -0.6 5,879,082 + +0.0 5,879,082 + +0.0 5,879,082 + +0.1 5,879,082 + -0.7 5,879,082 + -0.2 5,879,082 + -0.6 5,879,082 + -0.6 5,879,082 + -1.1 5,879,082 + -1.2 5,879,082 + -0.3 5,879,082 + -2.0 5,879,082 + -0.8 5,879,082 + +1.3 5,879,082 + +1.0 5,879,083 - +0.2 5,879,083 - -2.1 5,879,083 - -0.3 5,879,083 - +0.4 5,879,083 - +0.3 5,879,083 - -1.2 5,879,083 - -2.4 5,879,083 - -0.6 5,879,083 - -0.1 5,879,083 - -0.6 5,879,083 - -1.1 5,879,083 - -0.3 5,879,083 - +0.1 5,879,083 - -0.1 5,879,083 - -0.1 5,879,083 - +0.7 5,879,083 - -0.8 5,879,083 - +1.2 5,879,499 + AO353_26840 0.36 -0.3 5,879,500 - AO353_26840 0.36 -0.9 5,879,835 + AO353_26840 0.65 -1.1 5,879,836 - AO353_26840 0.65 -1.0 5,879,991 - AO353_26840 0.78 +0.8 5,880,194 - -0.9 5,880,258 + -1.0 5,880,259 - -0.8 5,880,313 - +0.6 5,880,394 + +0.0 5,880,395 - -0.5 5,880,395 - -1.0 5,880,395 - -1.3 5,880,395 - +0.0 5,880,395 - -0.8 5,880,488 - -0.2 5,880,725 - AO353_26845 0.15 -1.2 5,880,787 + AO353_26845 0.17 -1.2 5,880,788 - AO353_26845 0.17 +0.6 5,880,788 - AO353_26845 0.17 +0.6 5,880,788 - AO353_26845 0.17 +0.0 5,881,079 - AO353_26845 0.26 -0.6 5,881,202 - AO353_26845 0.30 +1.0 5,881,202 - AO353_26845 0.30 -0.4 5,881,223 - AO353_26845 0.31 -1.0 5,881,223 - AO353_26845 0.31 -3.6 5,881,223 - AO353_26845 0.31 +1.6 5,881,223 - AO353_26845 0.31 +0.2
Or see this region's nucleotide sequence