Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23440 and AO353_23445 are separated by 36 nucleotides AO353_23445 and AO353_23450 are separated by 114 nucleotides AO353_23450 and AO353_23455 are separated by 131 nucleotides AO353_23455 and AO353_23460 are separated by 19 nucleotides
AO353_23440: AO353_23440 - hypothetical protein, at 5,134,881 to 5,135,459
_23440
AO353_23445: AO353_23445 - glyoxalase, at 5,135,496 to 5,135,921
_23445
AO353_23450: AO353_23450 - LysR family transcriptional regulator, at 5,136,036 to 5,136,890
_23450
AO353_23455: AO353_23455 - enoyl-ACP reductase, at 5,137,022 to 5,137,816
_23455
AO353_23460: AO353_23460 - microcin ABC transporter ATP-binding protein, at 5,137,836 to 5,139,446
_23460
Position (kb) 5136
5137 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5135.164 kb on - strand, within AO353_23440 at 5135.164 kb on - strand, within AO353_23440 at 5135.219 kb on + strand, within AO353_23440 at 5135.219 kb on + strand, within AO353_23440 at 5135.393 kb on + strand, within AO353_23440 at 5135.458 kb on - strand at 5135.497 kb on + strand at 5135.497 kb on + strand at 5135.498 kb on - strand at 5135.498 kb on - strand at 5135.498 kb on - strand at 5135.858 kb on - strand, within AO353_23445 at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5136.076 kb on - strand at 5136.358 kb on + strand, within AO353_23450 at 5136.358 kb on + strand, within AO353_23450 at 5136.359 kb on - strand, within AO353_23450 at 5136.574 kb on + strand, within AO353_23450 at 5136.574 kb on + strand, within AO353_23450 at 5136.575 kb on - strand, within AO353_23450 at 5136.575 kb on - strand, within AO353_23450 at 5136.765 kb on + strand, within AO353_23450 at 5136.766 kb on - strand, within AO353_23450 at 5136.766 kb on - strand, within AO353_23450 at 5136.848 kb on + strand at 5136.849 kb on - strand at 5136.897 kb on + strand at 5136.898 kb on - strand at 5136.927 kb on + strand at 5136.959 kb on + strand at 5136.977 kb on + strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5136.978 kb on - strand at 5137.071 kb on + strand at 5137.071 kb on + strand at 5137.071 kb on + strand at 5137.072 kb on - strand at 5137.072 kb on - strand at 5137.072 kb on - strand at 5137.072 kb on - strand at 5137.248 kb on - strand, within AO353_23455 at 5137.293 kb on + strand, within AO353_23455 at 5137.298 kb on + strand, within AO353_23455 at 5137.298 kb on + strand, within AO353_23455 at 5137.298 kb on + strand, within AO353_23455 at 5137.335 kb on - strand, within AO353_23455 at 5137.335 kb on - strand, within AO353_23455 at 5137.335 kb on - strand, within AO353_23455 at 5137.335 kb on - strand, within AO353_23455 at 5137.341 kb on + strand, within AO353_23455 at 5137.342 kb on - strand, within AO353_23455 at 5137.342 kb on - strand, within AO353_23455 at 5137.372 kb on - strand, within AO353_23455 at 5137.372 kb on - strand, within AO353_23455 at 5137.372 kb on - strand, within AO353_23455 at 5137.447 kb on - strand, within AO353_23455 at 5137.701 kb on + strand, within AO353_23455 at 5137.702 kb on - strand, within AO353_23455 at 5137.702 kb on - strand, within AO353_23455 at 5137.886 kb on + strand at 5137.886 kb on + strand at 5137.887 kb on - strand at 5137.887 kb on - strand at 5137.888 kb on + strand at 5137.888 kb on + strand at 5137.888 kb on + strand at 5137.888 kb on + strand at 5137.889 kb on - strand at 5137.889 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 5,135,164 - AO353_23440 0.49 +0.5 5,135,164 - AO353_23440 0.49 +0.2 5,135,219 + AO353_23440 0.58 +2.0 5,135,219 + AO353_23440 0.58 +0.8 5,135,393 + AO353_23440 0.88 -0.2 5,135,458 - +0.5 5,135,497 + +0.6 5,135,497 + +0.4 5,135,498 - -0.3 5,135,498 - -1.5 5,135,498 - -0.8 5,135,858 - AO353_23445 0.85 +1.6 5,135,884 + -2.0 5,135,884 + -2.6 5,135,884 + -0.6 5,135,884 + -2.4 5,135,884 + +0.0 5,135,884 + +1.0 5,135,884 + -1.1 5,135,885 - -0.5 5,135,885 - -0.2 5,135,885 - -0.6 5,135,885 - -0.2 5,135,885 - -1.0 5,135,885 - -1.4 5,135,885 - +0.2 5,135,885 - -1.5 5,135,885 - +2.0 5,135,885 - +0.4 5,136,076 - -0.4 5,136,358 + AO353_23450 0.38 -0.5 5,136,358 + AO353_23450 0.38 +0.7 5,136,359 - AO353_23450 0.38 +0.8 5,136,574 + AO353_23450 0.63 -0.3 5,136,574 + AO353_23450 0.63 -0.0 5,136,575 - AO353_23450 0.63 +0.4 5,136,575 - AO353_23450 0.63 +0.7 5,136,765 + AO353_23450 0.85 +0.5 5,136,766 - AO353_23450 0.85 +1.7 5,136,766 - AO353_23450 0.85 +2.2 5,136,848 + +1.0 5,136,849 - +0.4 5,136,897 + +2.2 5,136,898 - -1.1 5,136,927 + +0.5 5,136,959 + +0.4 5,136,977 + +1.5 5,136,978 - -0.6 5,136,978 - +1.3 5,136,978 - -0.4 5,136,978 - +1.2 5,136,978 - +1.0 5,136,978 - -1.0 5,136,978 - -1.4 5,136,978 - +1.1 5,136,978 - +0.0 5,137,071 + +1.7 5,137,071 + +0.4 5,137,071 + -0.3 5,137,072 - -0.2 5,137,072 - -0.4 5,137,072 - +0.9 5,137,072 - -1.0 5,137,248 - AO353_23455 0.28 +0.7 5,137,293 + AO353_23455 0.34 +1.8 5,137,298 + AO353_23455 0.35 -2.0 5,137,298 + AO353_23455 0.35 -0.4 5,137,298 + AO353_23455 0.35 +0.1 5,137,335 - AO353_23455 0.39 +1.0 5,137,335 - AO353_23455 0.39 +0.4 5,137,335 - AO353_23455 0.39 +2.0 5,137,335 - AO353_23455 0.39 -1.0 5,137,341 + AO353_23455 0.40 +2.0 5,137,342 - AO353_23455 0.40 -0.9 5,137,342 - AO353_23455 0.40 -1.5 5,137,372 - AO353_23455 0.44 +0.3 5,137,372 - AO353_23455 0.44 +0.5 5,137,372 - AO353_23455 0.44 -1.2 5,137,447 - AO353_23455 0.53 +0.7 5,137,701 + AO353_23455 0.85 -1.2 5,137,702 - AO353_23455 0.86 -0.5 5,137,702 - AO353_23455 0.86 +0.4 5,137,886 + +0.1 5,137,886 + -0.6 5,137,887 - -1.0 5,137,887 - -0.1 5,137,888 + +0.9 5,137,888 + -0.4 5,137,888 + -0.6 5,137,888 + -0.7 5,137,889 - -0.5 5,137,889 - -1.5
Or see this region's nucleotide sequence