Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23435 and AO353_23440 are separated by 1 nucleotides AO353_23440 and AO353_23445 are separated by 36 nucleotides AO353_23445 and AO353_23450 are separated by 114 nucleotides
AO353_23435: AO353_23435 - twin-arginine translocation pathway signal protein, at 5,132,711 to 5,134,879
_23435
AO353_23440: AO353_23440 - hypothetical protein, at 5,134,881 to 5,135,459
_23440
AO353_23445: AO353_23445 - glyoxalase, at 5,135,496 to 5,135,921
_23445
AO353_23450: AO353_23450 - LysR family transcriptional regulator, at 5,136,036 to 5,136,890
_23450
Position (kb) 5134
5135
5136 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5133.881 kb on - strand, within AO353_23435 at 5134.008 kb on + strand, within AO353_23435 at 5134.008 kb on + strand, within AO353_23435 at 5134.008 kb on + strand, within AO353_23435 at 5134.008 kb on + strand, within AO353_23435 at 5134.008 kb on + strand, within AO353_23435 at 5134.008 kb on + strand, within AO353_23435 at 5134.009 kb on - strand, within AO353_23435 at 5134.009 kb on - strand, within AO353_23435 at 5134.009 kb on - strand, within AO353_23435 at 5134.019 kb on + strand, within AO353_23435 at 5134.020 kb on - strand, within AO353_23435 at 5134.022 kb on + strand, within AO353_23435 at 5134.023 kb on - strand, within AO353_23435 at 5134.095 kb on + strand, within AO353_23435 at 5134.095 kb on + strand, within AO353_23435 at 5134.096 kb on - strand, within AO353_23435 at 5134.096 kb on - strand, within AO353_23435 at 5134.096 kb on - strand, within AO353_23435 at 5134.096 kb on - strand, within AO353_23435 at 5134.096 kb on - strand, within AO353_23435 at 5134.196 kb on + strand, within AO353_23435 at 5134.197 kb on - strand, within AO353_23435 at 5134.197 kb on - strand, within AO353_23435 at 5134.197 kb on - strand, within AO353_23435 at 5134.197 kb on - strand, within AO353_23435 at 5134.197 kb on - strand, within AO353_23435 at 5134.198 kb on + strand, within AO353_23435 at 5134.198 kb on + strand, within AO353_23435 at 5134.490 kb on + strand, within AO353_23435 at 5134.490 kb on + strand, within AO353_23435 at 5134.490 kb on + strand, within AO353_23435 at 5134.688 kb on + strand at 5134.688 kb on + strand at 5134.689 kb on - strand at 5134.689 kb on - strand at 5134.789 kb on - strand at 5134.932 kb on + strand at 5134.932 kb on + strand at 5134.933 kb on - strand at 5134.933 kb on - strand at 5135.027 kb on + strand, within AO353_23440 at 5135.164 kb on - strand, within AO353_23440 at 5135.164 kb on - strand, within AO353_23440 at 5135.219 kb on + strand, within AO353_23440 at 5135.219 kb on + strand, within AO353_23440 at 5135.393 kb on + strand, within AO353_23440 at 5135.458 kb on - strand at 5135.497 kb on + strand at 5135.497 kb on + strand at 5135.498 kb on - strand at 5135.498 kb on - strand at 5135.498 kb on - strand at 5135.858 kb on - strand, within AO353_23445 at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.884 kb on + strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5135.885 kb on - strand at 5136.076 kb on - strand at 5136.358 kb on + strand, within AO353_23450 at 5136.358 kb on + strand, within AO353_23450 at 5136.359 kb on - strand, within AO353_23450
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 5,133,881 - AO353_23435 0.54 -0.8 5,134,008 + AO353_23435 0.60 -0.8 5,134,008 + AO353_23435 0.60 -0.9 5,134,008 + AO353_23435 0.60 +1.0 5,134,008 + AO353_23435 0.60 +1.0 5,134,008 + AO353_23435 0.60 +0.4 5,134,008 + AO353_23435 0.60 +0.2 5,134,009 - AO353_23435 0.60 +0.1 5,134,009 - AO353_23435 0.60 +0.5 5,134,009 - AO353_23435 0.60 -0.4 5,134,019 + AO353_23435 0.60 +1.0 5,134,020 - AO353_23435 0.60 -0.4 5,134,022 + AO353_23435 0.60 -0.4 5,134,023 - AO353_23435 0.60 -0.4 5,134,095 + AO353_23435 0.64 +0.6 5,134,095 + AO353_23435 0.64 -0.9 5,134,096 - AO353_23435 0.64 +1.0 5,134,096 - AO353_23435 0.64 +0.4 5,134,096 - AO353_23435 0.64 -0.2 5,134,096 - AO353_23435 0.64 -1.5 5,134,096 - AO353_23435 0.64 +1.5 5,134,196 + AO353_23435 0.68 +0.7 5,134,197 - AO353_23435 0.69 -0.1 5,134,197 - AO353_23435 0.69 -1.5 5,134,197 - AO353_23435 0.69 -0.3 5,134,197 - AO353_23435 0.69 -0.4 5,134,197 - AO353_23435 0.69 -1.2 5,134,198 + AO353_23435 0.69 +0.2 5,134,198 + AO353_23435 0.69 -0.7 5,134,490 + AO353_23435 0.82 +1.8 5,134,490 + AO353_23435 0.82 -1.8 5,134,490 + AO353_23435 0.82 +1.0 5,134,688 + -0.7 5,134,688 + -0.6 5,134,689 - -2.8 5,134,689 - +0.0 5,134,789 - +0.4 5,134,932 + -1.2 5,134,932 + -0.4 5,134,933 - -1.1 5,134,933 - +1.2 5,135,027 + AO353_23440 0.25 -0.8 5,135,164 - AO353_23440 0.49 +0.5 5,135,164 - AO353_23440 0.49 +0.2 5,135,219 + AO353_23440 0.58 +2.0 5,135,219 + AO353_23440 0.58 +0.8 5,135,393 + AO353_23440 0.88 -0.2 5,135,458 - +0.5 5,135,497 + +0.6 5,135,497 + +0.4 5,135,498 - -0.3 5,135,498 - -1.5 5,135,498 - -0.8 5,135,858 - AO353_23445 0.85 +1.6 5,135,884 + -2.0 5,135,884 + -2.6 5,135,884 + -0.6 5,135,884 + -2.4 5,135,884 + +0.0 5,135,884 + +1.0 5,135,884 + -1.1 5,135,885 - -0.5 5,135,885 - -0.2 5,135,885 - -0.6 5,135,885 - -0.2 5,135,885 - -1.0 5,135,885 - -1.4 5,135,885 - +0.2 5,135,885 - -1.5 5,135,885 - +2.0 5,135,885 - +0.4 5,136,076 - -0.4 5,136,358 + AO353_23450 0.38 -0.5 5,136,358 + AO353_23450 0.38 +0.7 5,136,359 - AO353_23450 0.38 +0.8
Or see this region's nucleotide sequence