Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23155 and AO353_23160 overlap by 10 nucleotides AO353_23160 and AO353_23165 are separated by 4 nucleotides AO353_23165 and AO353_23170 are separated by 13 nucleotides AO353_23170 and AO353_23175 overlap by 1 nucleotides
AO353_23155: AO353_23155 - IclR family transcriptional regulator, at 5,081,390 to 5,082,232
_23155
AO353_23160: AO353_23160 - hydrolase, at 5,082,223 to 5,083,107
_23160
AO353_23165: AO353_23165 - cupin, at 5,083,112 to 5,083,675
_23165
AO353_23170: AO353_23170 - short-chain dehydrogenase, at 5,083,689 to 5,084,453
_23170
AO353_23175: AO353_23175 - ABC transporter permease, at 5,084,453 to 5,085,229
_23175
Position (kb)
5083
5084 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.227 kb on - strand at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.467 kb on - strand, within AO353_23160 at 5082.467 kb on - strand, within AO353_23160 at 5082.558 kb on - strand, within AO353_23160 at 5082.558 kb on - strand, within AO353_23160 at 5082.866 kb on + strand, within AO353_23160 at 5082.925 kb on + strand, within AO353_23160 at 5083.113 kb on + strand at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.507 kb on - strand, within AO353_23165 at 5083.539 kb on + strand, within AO353_23165 at 5083.539 kb on + strand, within AO353_23165 at 5083.664 kb on + strand at 5083.664 kb on + strand at 5083.664 kb on + strand at 5083.665 kb on - strand at 5083.665 kb on - strand at 5083.665 kb on - strand at 5083.669 kb on + strand at 5083.669 kb on + strand at 5083.669 kb on + strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.699 kb on - strand at 5083.825 kb on + strand, within AO353_23170 at 5083.825 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.853 kb on - strand, within AO353_23170 at 5083.973 kb on - strand, within AO353_23170 at 5084.383 kb on + strand at 5084.484 kb on + strand at 5084.484 kb on + strand at 5084.484 kb on + strand at 5084.485 kb on - strand at 5084.485 kb on - strand at 5084.485 kb on - strand at 5084.531 kb on + strand, within AO353_23175 at 5084.531 kb on + strand, within AO353_23175 at 5084.531 kb on + strand, within AO353_23175 at 5084.532 kb on - strand, within AO353_23175 at 5084.532 kb on - strand, within AO353_23175 at 5084.532 kb on - strand, within AO353_23175
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 5,082,186 + +0.6 5,082,186 + +0.3 5,082,186 + -0.1 5,082,186 + +0.9 5,082,186 + +0.2 5,082,186 + -0.9 5,082,186 + +2.0 5,082,186 + -0.3 5,082,186 + +0.8 5,082,186 + -0.3 5,082,186 + +1.2 5,082,186 + -1.0 5,082,187 - +1.4 5,082,187 - -0.7 5,082,187 - +0.1 5,082,187 - -1.0 5,082,187 - -0.3 5,082,187 - +1.0 5,082,187 - -1.1 5,082,187 - +0.6 5,082,227 - +0.9 5,082,466 + AO353_23160 0.27 -0.2 5,082,466 + AO353_23160 0.27 +0.5 5,082,466 + AO353_23160 0.27 -1.3 5,082,466 + AO353_23160 0.27 -1.6 5,082,466 + AO353_23160 0.27 -0.3 5,082,466 + AO353_23160 0.27 +0.3 5,082,466 + AO353_23160 0.27 -2.0 5,082,467 - AO353_23160 0.28 -0.3 5,082,467 - AO353_23160 0.28 -0.5 5,082,558 - AO353_23160 0.38 -1.0 5,082,558 - AO353_23160 0.38 -0.1 5,082,866 + AO353_23160 0.73 +0.7 5,082,925 + AO353_23160 0.79 +0.1 5,083,113 + -1.6 5,083,474 - AO353_23165 0.64 +1.6 5,083,474 - AO353_23165 0.64 -1.4 5,083,474 - AO353_23165 0.64 -0.5 5,083,474 - AO353_23165 0.64 -1.1 5,083,474 - AO353_23165 0.64 -0.3 5,083,474 - AO353_23165 0.64 -1.8 5,083,507 - AO353_23165 0.70 -0.9 5,083,539 + AO353_23165 0.76 -1.2 5,083,539 + AO353_23165 0.76 -0.0 5,083,664 + +1.1 5,083,664 + -1.1 5,083,664 + -0.0 5,083,665 - +1.0 5,083,665 - +1.0 5,083,665 - +0.2 5,083,669 + +0.7 5,083,669 + +0.6 5,083,669 + +0.1 5,083,670 - +0.5 5,083,670 - -0.5 5,083,670 - -1.5 5,083,670 - +0.3 5,083,670 - -1.0 5,083,670 - -0.4 5,083,670 - -0.6 5,083,699 - +1.2 5,083,825 + AO353_23170 0.18 +1.6 5,083,825 + AO353_23170 0.18 -0.2 5,083,852 + AO353_23170 0.21 +0.4 5,083,852 + AO353_23170 0.21 -0.8 5,083,852 + AO353_23170 0.21 -0.5 5,083,852 + AO353_23170 0.21 -0.3 5,083,852 + AO353_23170 0.21 -0.3 5,083,853 - AO353_23170 0.21 -1.5 5,083,973 - AO353_23170 0.37 +0.1 5,084,383 + -0.6 5,084,484 + -1.0 5,084,484 + -1.4 5,084,484 + -1.1 5,084,485 - +0.5 5,084,485 - +0.1 5,084,485 - +0.6 5,084,531 + AO353_23175 0.10 -1.0 5,084,531 + AO353_23175 0.10 -1.2 5,084,531 + AO353_23175 0.10 +0.6 5,084,532 - AO353_23175 0.10 -1.9 5,084,532 - AO353_23175 0.10 +0.2 5,084,532 - AO353_23175 0.10 +0.2
Or see this region's nucleotide sequence