Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21235

Experiment: Cobalt chloride 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_21235 and AO353_21240 are separated by 34 nucleotides AO353_21235: AO353_21235 - hypothetical protein, at 4,645,188 to 4,646,330 _21235 AO353_21240: AO353_21240 - undecaprenyl-phosphate glucose phosphotransferase, at 4,646,365 to 4,647,786 _21240 Position (kb) 4645 4646 4647Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4644.192 kb on + strandat 4644.193 kb on - strandat 4644.193 kb on - strandat 4644.193 kb on - strandat 4644.247 kb on - strandat 4644.336 kb on + strandat 4644.336 kb on + strandat 4644.336 kb on + strandat 4644.394 kb on + strandat 4644.394 kb on + strandat 4644.394 kb on + strandat 4644.394 kb on + strandat 4644.399 kb on + strandat 4644.399 kb on + strandat 4644.399 kb on + strandat 4644.399 kb on + strandat 4644.399 kb on + strandat 4644.399 kb on + strandat 4644.400 kb on - strandat 4644.400 kb on - strandat 4644.400 kb on - strandat 4644.400 kb on - strandat 4644.408 kb on + strandat 4644.408 kb on + strandat 4644.409 kb on - strandat 4644.439 kb on - strandat 4644.439 kb on - strandat 4644.462 kb on + strandat 4644.463 kb on - strandat 4644.519 kb on + strandat 4644.519 kb on + strandat 4644.558 kb on + strandat 4644.558 kb on + strandat 4644.558 kb on + strandat 4644.559 kb on - strandat 4644.613 kb on - strandat 4644.613 kb on - strandat 4644.619 kb on + strandat 4644.619 kb on + strandat 4644.620 kb on - strandat 4644.620 kb on - strandat 4644.620 kb on - strandat 4644.674 kb on + strandat 4644.675 kb on - strandat 4644.675 kb on - strandat 4644.675 kb on - strandat 4644.680 kb on - strandat 4644.769 kb on + strandat 4644.769 kb on + strandat 4644.770 kb on - strandat 4644.784 kb on - strandat 4644.809 kb on - strandat 4644.809 kb on - strandat 4644.854 kb on + strandat 4644.854 kb on + strandat 4644.855 kb on - strandat 4645.032 kb on + strandat 4645.033 kb on - strandat 4645.038 kb on - strandat 4645.103 kb on + strandat 4645.103 kb on + strandat 4645.103 kb on + strandat 4645.104 kb on - strandat 4645.144 kb on + strandat 4645.194 kb on - strandat 4645.199 kb on + strandat 4645.199 kb on + strandat 4645.199 kb on + strandat 4645.200 kb on - strandat 4645.200 kb on - strandat 4645.200 kb on - strandat 4645.244 kb on + strandat 4645.245 kb on - strandat 4645.249 kb on - strandat 4645.328 kb on + strand, within AO353_21235at 4645.410 kb on + strand, within AO353_21235at 4645.411 kb on - strand, within AO353_21235at 4645.418 kb on + strand, within AO353_21235at 4645.419 kb on - strand, within AO353_21235at 4645.419 kb on - strand, within AO353_21235at 4645.466 kb on + strand, within AO353_21235at 4645.466 kb on + strand, within AO353_21235at 4645.466 kb on + strand, within AO353_21235at 4645.467 kb on - strand, within AO353_21235at 4645.467 kb on - strand, within AO353_21235at 4645.467 kb on - strand, within AO353_21235at 4645.468 kb on + strand, within AO353_21235at 4645.468 kb on + strand, within AO353_21235at 4645.468 kb on + strand, within AO353_21235at 4645.469 kb on - strand, within AO353_21235at 4645.469 kb on - strand, within AO353_21235at 4645.469 kb on - strand, within AO353_21235at 4645.469 kb on - strand, within AO353_21235at 4645.564 kb on + strand, within AO353_21235at 4645.565 kb on - strand, within AO353_21235at 4645.568 kb on - strand, within AO353_21235at 4645.611 kb on - strand, within AO353_21235at 4645.677 kb on + strand, within AO353_21235at 4645.677 kb on + strand, within AO353_21235at 4645.677 kb on + strand, within AO353_21235at 4645.678 kb on - strand, within AO353_21235at 4645.709 kb on + strand, within AO353_21235at 4645.713 kb on + strand, within AO353_21235at 4645.714 kb on - strand, within AO353_21235at 4645.714 kb on - strand, within AO353_21235at 4645.758 kb on + strand, within AO353_21235at 4645.758 kb on + strand, within AO353_21235at 4645.758 kb on + strand, within AO353_21235at 4645.758 kb on + strand, within AO353_21235at 4645.786 kb on - strand, within AO353_21235at 4645.846 kb on + strand, within AO353_21235at 4645.847 kb on - strand, within AO353_21235at 4645.847 kb on - strand, within AO353_21235at 4645.932 kb on + strand, within AO353_21235at 4645.932 kb on + strand, within AO353_21235at 4645.949 kb on + strand, within AO353_21235at 4645.949 kb on + strand, within AO353_21235at 4645.949 kb on + strand, within AO353_21235at 4646.020 kb on - strand, within AO353_21235at 4646.023 kb on + strand, within AO353_21235at 4646.023 kb on + strand, within AO353_21235at 4646.023 kb on + strand, within AO353_21235at 4646.023 kb on + strand, within AO353_21235at 4646.023 kb on + strand, within AO353_21235at 4646.023 kb on + strand, within AO353_21235at 4646.023 kb on + strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.024 kb on - strand, within AO353_21235at 4646.043 kb on + strand, within AO353_21235at 4646.044 kb on - strand, within AO353_21235at 4646.113 kb on - strand, within AO353_21235at 4646.161 kb on + strand, within AO353_21235at 4646.161 kb on + strand, within AO353_21235at 4646.162 kb on - strand, within AO353_21235at 4646.162 kb on - strand, within AO353_21235at 4646.238 kb on + strandat 4646.239 kb on - strandat 4646.239 kb on - strandat 4646.317 kb on - strandat 4646.321 kb on - strandat 4646.369 kb on + strandat 4646.370 kb on - strandat 4646.447 kb on + strandat 4646.448 kb on - strandat 4646.486 kb on - strandat 4646.486 kb on - strandat 4646.486 kb on - strandat 4646.486 kb on - strandat 4646.486 kb on - strandat 4646.487 kb on + strandat 4646.488 kb on - strandat 4646.547 kb on + strand, within AO353_21240at 4646.548 kb on - strand, within AO353_21240at 4646.604 kb on + strand, within AO353_21240at 4646.604 kb on + strand, within AO353_21240at 4646.604 kb on + strand, within AO353_21240at 4646.679 kb on + strand, within AO353_21240at 4646.680 kb on - strand, within AO353_21240at 4646.680 kb on - strand, within AO353_21240at 4646.680 kb on - strand, within AO353_21240at 4646.680 kb on - strand, within AO353_21240at 4646.692 kb on - strand, within AO353_21240at 4646.871 kb on + strand, within AO353_21240at 4647.082 kb on + strand, within AO353_21240at 4647.097 kb on - strand, within AO353_21240at 4647.134 kb on - strand, within AO353_21240at 4647.134 kb on - strand, within AO353_21240at 4647.181 kb on - strand, within AO353_21240at 4647.288 kb on + strand, within AO353_21240at 4647.295 kb on + strand, within AO353_21240

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM
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4,644,192 + -0.0
4,644,193 - -2.0
4,644,193 - -0.4
4,644,193 - -1.5
4,644,247 - +1.7
4,644,336 + -0.5
4,644,336 + -1.3
4,644,336 + -0.0
4,644,394 + -2.6
4,644,394 + +0.1
4,644,394 + +1.3
4,644,394 + +0.2
4,644,399 + +1.1
4,644,399 + +0.5
4,644,399 + -1.4
4,644,399 + -0.7
4,644,399 + +0.7
4,644,399 + +1.6
4,644,400 - +2.5
4,644,400 - -0.6
4,644,400 - +0.4
4,644,400 - -1.3
4,644,408 + -0.5
4,644,408 + -0.4
4,644,409 - -0.0
4,644,439 - -0.7
4,644,439 - +1.7
4,644,462 + -2.1
4,644,463 - -0.9
4,644,519 + +0.2
4,644,519 + +0.2
4,644,558 + -0.3
4,644,558 + -0.8
4,644,558 + +0.5
4,644,559 - -0.9
4,644,613 - -0.3
4,644,613 - +0.3
4,644,619 + -0.7
4,644,619 + -0.3
4,644,620 - +0.1
4,644,620 - -1.5
4,644,620 - -0.1
4,644,674 + +0.6
4,644,675 - +0.6
4,644,675 - -0.5
4,644,675 - +0.1
4,644,680 - -0.2
4,644,769 + -1.8
4,644,769 + -0.5
4,644,770 - -0.3
4,644,784 - -1.2
4,644,809 - +0.1
4,644,809 - +2.3
4,644,854 + +0.0
4,644,854 + +1.7
4,644,855 - +0.1
4,645,032 + -0.5
4,645,033 - -0.3
4,645,038 - +0.2
4,645,103 + +0.5
4,645,103 + +1.0
4,645,103 + +0.5
4,645,104 - +0.2
4,645,144 + -0.7
4,645,194 - +0.4
4,645,199 + -0.4
4,645,199 + -0.9
4,645,199 + +1.0
4,645,200 - +0.7
4,645,200 - +0.3
4,645,200 - -2.1
4,645,244 + -0.1
4,645,245 - -2.5
4,645,249 - +0.1
4,645,328 + AO353_21235 0.12 -0.1
4,645,410 + AO353_21235 0.19 -0.2
4,645,411 - AO353_21235 0.20 +1.5
4,645,418 + AO353_21235 0.20 -0.3
4,645,419 - AO353_21235 0.20 +1.1
4,645,419 - AO353_21235 0.20 -0.7
4,645,466 + AO353_21235 0.24 +0.7
4,645,466 + AO353_21235 0.24 -0.5
4,645,466 + AO353_21235 0.24 -0.3
4,645,467 - AO353_21235 0.24 +1.1
4,645,467 - AO353_21235 0.24 +1.0
4,645,467 - AO353_21235 0.24 -1.7
4,645,468 + AO353_21235 0.24 +1.8
4,645,468 + AO353_21235 0.24 +0.2
4,645,468 + AO353_21235 0.24 +1.0
4,645,469 - AO353_21235 0.25 +0.6
4,645,469 - AO353_21235 0.25 +3.1
4,645,469 - AO353_21235 0.25 +0.7
4,645,469 - AO353_21235 0.25 +1.6
4,645,564 + AO353_21235 0.33 +0.7
4,645,565 - AO353_21235 0.33 -0.5
4,645,568 - AO353_21235 0.33 +0.9
4,645,611 - AO353_21235 0.37 +1.7
4,645,677 + AO353_21235 0.43 -0.9
4,645,677 + AO353_21235 0.43 +0.3
4,645,677 + AO353_21235 0.43 -0.9
4,645,678 - AO353_21235 0.43 -0.7
4,645,709 + AO353_21235 0.46 +0.4
4,645,713 + AO353_21235 0.46 +0.7
4,645,714 - AO353_21235 0.46 +0.6
4,645,714 - AO353_21235 0.46 +0.5
4,645,758 + AO353_21235 0.50 +0.5
4,645,758 + AO353_21235 0.50 +2.1
4,645,758 + AO353_21235 0.50 +0.4
4,645,758 + AO353_21235 0.50 +0.0
4,645,786 - AO353_21235 0.52 -0.1
4,645,846 + AO353_21235 0.58 -0.2
4,645,847 - AO353_21235 0.58 +2.3
4,645,847 - AO353_21235 0.58 -0.6
4,645,932 + AO353_21235 0.65 +0.7
4,645,932 + AO353_21235 0.65 -0.4
4,645,949 + AO353_21235 0.67 -0.0
4,645,949 + AO353_21235 0.67 +1.6
4,645,949 + AO353_21235 0.67 -0.9
4,646,020 - AO353_21235 0.73 -0.3
4,646,023 + AO353_21235 0.73 +0.7
4,646,023 + AO353_21235 0.73 +2.3
4,646,023 + AO353_21235 0.73 +0.2
4,646,023 + AO353_21235 0.73 -0.1
4,646,023 + AO353_21235 0.73 -0.0
4,646,023 + AO353_21235 0.73 +0.3
4,646,023 + AO353_21235 0.73 +1.3
4,646,024 - AO353_21235 0.73 -0.0
4,646,024 - AO353_21235 0.73 +1.1
4,646,024 - AO353_21235 0.73 +0.2
4,646,024 - AO353_21235 0.73 -0.9
4,646,024 - AO353_21235 0.73 +0.3
4,646,024 - AO353_21235 0.73 -0.1
4,646,024 - AO353_21235 0.73 -0.7
4,646,024 - AO353_21235 0.73 +0.3
4,646,024 - AO353_21235 0.73 -0.7
4,646,043 + AO353_21235 0.75 -1.6
4,646,044 - AO353_21235 0.75 -0.1
4,646,113 - AO353_21235 0.81 -1.7
4,646,161 + AO353_21235 0.85 -1.2
4,646,161 + AO353_21235 0.85 -0.5
4,646,162 - AO353_21235 0.85 +1.4
4,646,162 - AO353_21235 0.85 +0.3
4,646,238 + +0.6
4,646,239 - +0.4
4,646,239 - +0.7
4,646,317 - +1.8
4,646,321 - -0.0
4,646,369 + -1.6
4,646,370 - -0.7
4,646,447 + -0.2
4,646,448 - -0.1
4,646,486 - -0.5
4,646,486 - -0.3
4,646,486 - +0.5
4,646,486 - -0.5
4,646,486 - +1.2
4,646,487 + +1.7
4,646,488 - -0.5
4,646,547 + AO353_21240 0.13 +3.1
4,646,548 - AO353_21240 0.13 -2.8
4,646,604 + AO353_21240 0.17 +0.2
4,646,604 + AO353_21240 0.17 -1.0
4,646,604 + AO353_21240 0.17 -0.1
4,646,679 + AO353_21240 0.22 +0.5
4,646,680 - AO353_21240 0.22 -0.4
4,646,680 - AO353_21240 0.22 +0.8
4,646,680 - AO353_21240 0.22 +0.1
4,646,680 - AO353_21240 0.22 +0.1
4,646,692 - AO353_21240 0.23 -0.7
4,646,871 + AO353_21240 0.36 -1.3
4,647,082 + AO353_21240 0.50 +0.5
4,647,097 - AO353_21240 0.51 -1.3
4,647,134 - AO353_21240 0.54 +0.6
4,647,134 - AO353_21240 0.54 -0.5
4,647,181 - AO353_21240 0.57 -1.7
4,647,288 + AO353_21240 0.65 +0.1
4,647,295 + AO353_21240 0.65 -1.2

Or see this region's nucleotide sequence