Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20995 and AO353_21000 are separated by 246 nucleotides AO353_21000 and AO353_21005 are separated by 14 nucleotides AO353_21005 and AO353_21010 are separated by 87 nucleotides
AO353_20995: AO353_20995 - transcriptional regulator, at 4,588,268 to 4,589,776
_20995
AO353_21000: AO353_21000 - quinone oxidoreductase, at 4,590,023 to 4,591,003
_21000
AO353_21005: AO353_21005 - taurine dioxygenase, at 4,591,018 to 4,591,866
_21005
AO353_21010: AO353_21010 - transposase, at 4,591,954 to 4,593,006
_21010
Position (kb)
4590
4591
4592 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4589.147 kb on - strand, within AO353_20995 at 4589.220 kb on + strand, within AO353_20995 at 4589.220 kb on + strand, within AO353_20995 at 4589.220 kb on + strand, within AO353_20995 at 4589.221 kb on - strand, within AO353_20995 at 4589.221 kb on - strand, within AO353_20995 at 4589.221 kb on - strand, within AO353_20995 at 4589.346 kb on + strand, within AO353_20995 at 4589.346 kb on + strand, within AO353_20995 at 4589.400 kb on + strand, within AO353_20995 at 4589.400 kb on + strand, within AO353_20995 at 4589.400 kb on + strand, within AO353_20995 at 4589.400 kb on + strand, within AO353_20995 at 4589.400 kb on + strand, within AO353_20995 at 4589.401 kb on - strand, within AO353_20995 at 4589.401 kb on - strand, within AO353_20995 at 4589.401 kb on - strand, within AO353_20995 at 4589.401 kb on - strand, within AO353_20995 at 4589.404 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.526 kb on + strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.527 kb on - strand, within AO353_20995 at 4589.697 kb on + strand at 4589.697 kb on + strand at 4589.698 kb on - strand at 4589.698 kb on - strand at 4589.698 kb on - strand at 4589.860 kb on + strand at 4589.861 kb on - strand at 4589.960 kb on + strand at 4589.961 kb on - strand at 4589.961 kb on - strand at 4589.961 kb on - strand at 4589.997 kb on + strand at 4589.997 kb on + strand at 4589.998 kb on - strand at 4590.014 kb on + strand at 4590.014 kb on + strand at 4590.014 kb on + strand at 4590.014 kb on + strand at 4590.014 kb on + strand at 4590.015 kb on - strand at 4590.044 kb on + strand at 4590.075 kb on - strand at 4590.146 kb on + strand, within AO353_21000 at 4590.146 kb on + strand, within AO353_21000 at 4590.146 kb on + strand, within AO353_21000 at 4590.146 kb on + strand, within AO353_21000 at 4590.146 kb on + strand, within AO353_21000 at 4590.146 kb on + strand, within AO353_21000 at 4590.146 kb on + strand, within AO353_21000 at 4590.147 kb on - strand, within AO353_21000 at 4590.158 kb on + strand, within AO353_21000 at 4590.158 kb on + strand, within AO353_21000 at 4590.158 kb on + strand, within AO353_21000 at 4590.158 kb on + strand, within AO353_21000 at 4590.158 kb on + strand, within AO353_21000 at 4590.158 kb on + strand, within AO353_21000 at 4590.159 kb on - strand, within AO353_21000 at 4590.159 kb on - strand, within AO353_21000 at 4590.177 kb on - strand, within AO353_21000 at 4590.247 kb on + strand, within AO353_21000 at 4590.255 kb on + strand, within AO353_21000 at 4590.255 kb on + strand, within AO353_21000 at 4590.255 kb on + strand, within AO353_21000 at 4590.255 kb on + strand, within AO353_21000 at 4590.278 kb on + strand, within AO353_21000 at 4590.278 kb on + strand, within AO353_21000 at 4590.278 kb on + strand, within AO353_21000 at 4590.278 kb on + strand, within AO353_21000 at 4590.279 kb on - strand, within AO353_21000 at 4590.279 kb on - strand, within AO353_21000 at 4590.279 kb on - strand, within AO353_21000 at 4590.279 kb on - strand, within AO353_21000 at 4590.279 kb on - strand, within AO353_21000 at 4590.279 kb on - strand, within AO353_21000 at 4590.279 kb on - strand, within AO353_21000 at 4590.295 kb on + strand, within AO353_21000 at 4590.295 kb on + strand, within AO353_21000 at 4590.295 kb on + strand, within AO353_21000 at 4590.296 kb on - strand, within AO353_21000 at 4590.296 kb on - strand, within AO353_21000 at 4590.296 kb on - strand, within AO353_21000 at 4590.296 kb on - strand, within AO353_21000 at 4590.296 kb on - strand, within AO353_21000 at 4590.308 kb on + strand, within AO353_21000 at 4590.413 kb on + strand, within AO353_21000 at 4590.432 kb on - strand, within AO353_21000 at 4590.432 kb on - strand, within AO353_21000 at 4590.463 kb on - strand, within AO353_21000 at 4590.463 kb on - strand, within AO353_21000 at 4590.463 kb on - strand, within AO353_21000 at 4590.599 kb on + strand, within AO353_21000 at 4590.600 kb on - strand, within AO353_21000 at 4590.600 kb on - strand, within AO353_21000 at 4590.600 kb on - strand, within AO353_21000 at 4590.600 kb on - strand, within AO353_21000 at 4590.685 kb on + strand, within AO353_21000 at 4590.685 kb on + strand, within AO353_21000 at 4590.685 kb on + strand, within AO353_21000 at 4590.686 kb on - strand, within AO353_21000 at 4590.686 kb on - strand, within AO353_21000 at 4590.686 kb on - strand, within AO353_21000 at 4590.686 kb on - strand, within AO353_21000 at 4590.830 kb on + strand, within AO353_21000 at 4590.830 kb on + strand, within AO353_21000 at 4590.831 kb on - strand, within AO353_21000 at 4590.831 kb on - strand, within AO353_21000 at 4590.831 kb on - strand, within AO353_21000 at 4590.923 kb on + strand at 4590.923 kb on + strand at 4590.923 kb on + strand at 4590.923 kb on + strand at 4590.923 kb on + strand at 4590.923 kb on + strand at 4590.924 kb on - strand at 4590.924 kb on - strand at 4591.001 kb on + strand at 4591.001 kb on + strand at 4591.001 kb on + strand at 4591.001 kb on + strand at 4591.001 kb on + strand at 4591.001 kb on + strand at 4591.001 kb on + strand at 4591.001 kb on + strand at 4591.002 kb on - strand at 4591.002 kb on - strand at 4591.264 kb on + strand, within AO353_21005 at 4591.264 kb on + strand, within AO353_21005 at 4591.264 kb on + strand, within AO353_21005 at 4591.264 kb on + strand, within AO353_21005 at 4591.265 kb on - strand, within AO353_21005 at 4591.265 kb on - strand, within AO353_21005 at 4591.265 kb on - strand, within AO353_21005 at 4591.265 kb on - strand, within AO353_21005 at 4591.626 kb on + strand, within AO353_21005 at 4591.626 kb on + strand, within AO353_21005 at 4591.627 kb on - strand, within AO353_21005 at 4591.630 kb on + strand, within AO353_21005 at 4591.630 kb on + strand, within AO353_21005 at 4591.630 kb on + strand, within AO353_21005 at 4591.630 kb on + strand, within AO353_21005 at 4591.630 kb on + strand, within AO353_21005 at 4591.630 kb on + strand, within AO353_21005 at 4591.631 kb on - strand, within AO353_21005 at 4591.631 kb on - strand, within AO353_21005 at 4591.631 kb on - strand, within AO353_21005 at 4591.631 kb on - strand, within AO353_21005 at 4591.650 kb on - strand, within AO353_21005 at 4591.650 kb on - strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.714 kb on + strand, within AO353_21005 at 4591.715 kb on - strand, within AO353_21005 at 4591.715 kb on - strand, within AO353_21005 at 4591.715 kb on - strand at 4591.715 kb on - strand, within AO353_21005 at 4591.715 kb on - strand, within AO353_21005 at 4591.715 kb on - strand, within AO353_21005 at 4591.715 kb on - strand, within AO353_21005 at 4591.726 kb on + strand, within AO353_21005 at 4591.726 kb on + strand, within AO353_21005 at 4591.727 kb on - strand, within AO353_21005 at 4591.861 kb on + strand at 4591.861 kb on + strand at 4591.861 kb on + strand at 4591.861 kb on + strand at 4591.861 kb on + strand at 4591.862 kb on - strand at 4591.862 kb on - strand at 4591.936 kb on + strand at 4591.937 kb on - strand at 4591.937 kb on - strand at 4591.937 kb on - strand at 4591.939 kb on + strand at 4591.939 kb on + strand at 4591.939 kb on + strand at 4591.939 kb on + strand at 4591.939 kb on + strand at 4591.939 kb on + strand at 4591.940 kb on - strand at 4591.940 kb on - strand at 4591.940 kb on - strand at 4591.948 kb on + strand at 4591.948 kb on + strand at 4591.948 kb on + strand at 4591.949 kb on - strand at 4591.949 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 4,589,147 - AO353_20995 0.58 -1.2 4,589,220 + AO353_20995 0.63 +0.4 4,589,220 + AO353_20995 0.63 -0.2 4,589,220 + AO353_20995 0.63 +0.1 4,589,221 - AO353_20995 0.63 -0.1 4,589,221 - AO353_20995 0.63 -2.0 4,589,221 - AO353_20995 0.63 -1.0 4,589,346 + AO353_20995 0.71 -1.7 4,589,346 + AO353_20995 0.71 -0.3 4,589,400 + AO353_20995 0.75 -1.1 4,589,400 + AO353_20995 0.75 -0.2 4,589,400 + AO353_20995 0.75 -0.5 4,589,400 + AO353_20995 0.75 +0.2 4,589,400 + AO353_20995 0.75 -0.6 4,589,401 - AO353_20995 0.75 -0.1 4,589,401 - AO353_20995 0.75 +0.2 4,589,401 - AO353_20995 0.75 -0.7 4,589,401 - AO353_20995 0.75 -0.1 4,589,404 + AO353_20995 0.75 +0.1 4,589,526 + AO353_20995 0.83 +0.6 4,589,526 + AO353_20995 0.83 +1.4 4,589,526 + AO353_20995 0.83 +0.1 4,589,526 + AO353_20995 0.83 -0.6 4,589,526 + AO353_20995 0.83 -0.1 4,589,526 + AO353_20995 0.83 +0.5 4,589,526 + AO353_20995 0.83 -0.7 4,589,526 + AO353_20995 0.83 +0.6 4,589,526 + AO353_20995 0.83 +0.9 4,589,526 + AO353_20995 0.83 -0.5 4,589,526 + AO353_20995 0.83 +1.0 4,589,526 + AO353_20995 0.83 +0.1 4,589,526 + AO353_20995 0.83 -0.5 4,589,526 + AO353_20995 0.83 +0.1 4,589,526 + AO353_20995 0.83 -1.4 4,589,527 - AO353_20995 0.83 +0.2 4,589,527 - AO353_20995 0.83 +1.2 4,589,527 - AO353_20995 0.83 +0.8 4,589,527 - AO353_20995 0.83 -0.6 4,589,527 - AO353_20995 0.83 -0.9 4,589,527 - AO353_20995 0.83 -1.1 4,589,527 - AO353_20995 0.83 +0.8 4,589,527 - AO353_20995 0.83 -0.4 4,589,527 - AO353_20995 0.83 -0.7 4,589,527 - AO353_20995 0.83 -1.0 4,589,527 - AO353_20995 0.83 +0.0 4,589,697 + -0.1 4,589,697 + +2.3 4,589,698 - +2.1 4,589,698 - +0.6 4,589,698 - -1.7 4,589,860 + +0.2 4,589,861 - -2.4 4,589,960 + +0.1 4,589,961 - +0.1 4,589,961 - -0.3 4,589,961 - +0.2 4,589,997 + +0.9 4,589,997 + -1.2 4,589,998 - -1.2 4,590,014 + -1.5 4,590,014 + -0.4 4,590,014 + +1.6 4,590,014 + -0.1 4,590,014 + +1.0 4,590,015 - +0.3 4,590,044 + +1.1 4,590,075 - -1.2 4,590,146 + AO353_21000 0.13 +1.2 4,590,146 + AO353_21000 0.13 -2.2 4,590,146 + AO353_21000 0.13 +0.9 4,590,146 + AO353_21000 0.13 +0.2 4,590,146 + AO353_21000 0.13 +1.3 4,590,146 + AO353_21000 0.13 -0.2 4,590,146 + AO353_21000 0.13 -0.5 4,590,147 - AO353_21000 0.13 -0.2 4,590,158 + AO353_21000 0.14 +0.6 4,590,158 + AO353_21000 0.14 +1.8 4,590,158 + AO353_21000 0.14 +0.3 4,590,158 + AO353_21000 0.14 -0.8 4,590,158 + AO353_21000 0.14 -0.7 4,590,158 + AO353_21000 0.14 -0.4 4,590,159 - AO353_21000 0.14 +1.2 4,590,159 - AO353_21000 0.14 -0.7 4,590,177 - AO353_21000 0.16 -1.8 4,590,247 + AO353_21000 0.23 +2.1 4,590,255 + AO353_21000 0.24 -1.5 4,590,255 + AO353_21000 0.24 +0.5 4,590,255 + AO353_21000 0.24 -0.5 4,590,255 + AO353_21000 0.24 -2.2 4,590,278 + AO353_21000 0.26 -0.5 4,590,278 + AO353_21000 0.26 -0.9 4,590,278 + AO353_21000 0.26 -0.9 4,590,278 + AO353_21000 0.26 -0.5 4,590,279 - AO353_21000 0.26 -0.2 4,590,279 - AO353_21000 0.26 +0.4 4,590,279 - AO353_21000 0.26 -0.6 4,590,279 - AO353_21000 0.26 -0.7 4,590,279 - AO353_21000 0.26 +0.4 4,590,279 - AO353_21000 0.26 -1.1 4,590,279 - AO353_21000 0.26 -1.3 4,590,295 + AO353_21000 0.28 -0.1 4,590,295 + AO353_21000 0.28 -0.5 4,590,295 + AO353_21000 0.28 +0.2 4,590,296 - AO353_21000 0.28 +0.1 4,590,296 - AO353_21000 0.28 +1.4 4,590,296 - AO353_21000 0.28 -0.9 4,590,296 - AO353_21000 0.28 -2.2 4,590,296 - AO353_21000 0.28 -0.9 4,590,308 + AO353_21000 0.29 -0.9 4,590,413 + AO353_21000 0.40 +0.5 4,590,432 - AO353_21000 0.42 +1.0 4,590,432 - AO353_21000 0.42 -0.1 4,590,463 - AO353_21000 0.45 -1.4 4,590,463 - AO353_21000 0.45 -1.3 4,590,463 - AO353_21000 0.45 -0.8 4,590,599 + AO353_21000 0.59 +1.8 4,590,600 - AO353_21000 0.59 +1.1 4,590,600 - AO353_21000 0.59 -1.6 4,590,600 - AO353_21000 0.59 +0.0 4,590,600 - AO353_21000 0.59 -1.8 4,590,685 + AO353_21000 0.67 -0.6 4,590,685 + AO353_21000 0.67 -0.5 4,590,685 + AO353_21000 0.67 +0.4 4,590,686 - AO353_21000 0.68 -0.1 4,590,686 - AO353_21000 0.68 +0.8 4,590,686 - AO353_21000 0.68 +0.1 4,590,686 - AO353_21000 0.68 -0.0 4,590,830 + AO353_21000 0.82 -0.6 4,590,830 + AO353_21000 0.82 -0.5 4,590,831 - AO353_21000 0.82 +1.0 4,590,831 - AO353_21000 0.82 +0.2 4,590,831 - AO353_21000 0.82 -0.4 4,590,923 + -0.5 4,590,923 + +0.4 4,590,923 + +0.3 4,590,923 + +0.6 4,590,923 + -0.6 4,590,923 + -1.7 4,590,924 - -0.2 4,590,924 - -0.7 4,591,001 + +0.4 4,591,001 + +0.4 4,591,001 + -1.5 4,591,001 + -0.3 4,591,001 + -2.7 4,591,001 + -0.0 4,591,001 + -0.4 4,591,001 + -0.7 4,591,002 - +1.4 4,591,002 - +1.1 4,591,264 + AO353_21005 0.29 +0.2 4,591,264 + AO353_21005 0.29 -0.2 4,591,264 + AO353_21005 0.29 +1.5 4,591,264 + AO353_21005 0.29 -0.8 4,591,265 - AO353_21005 0.29 +1.6 4,591,265 - AO353_21005 0.29 -2.2 4,591,265 - AO353_21005 0.29 +0.4 4,591,265 - AO353_21005 0.29 -1.3 4,591,626 + AO353_21005 0.72 +2.1 4,591,626 + AO353_21005 0.72 +0.5 4,591,627 - AO353_21005 0.72 +1.2 4,591,630 + AO353_21005 0.72 +0.4 4,591,630 + AO353_21005 0.72 -1.6 4,591,630 + AO353_21005 0.72 -1.0 4,591,630 + AO353_21005 0.72 +0.6 4,591,630 + AO353_21005 0.72 +0.2 4,591,630 + AO353_21005 0.72 +0.2 4,591,631 - AO353_21005 0.72 +0.8 4,591,631 - AO353_21005 0.72 -1.4 4,591,631 - AO353_21005 0.72 -0.2 4,591,631 - AO353_21005 0.72 -0.7 4,591,650 - AO353_21005 0.74 -0.3 4,591,650 - AO353_21005 0.74 -0.2 4,591,714 + AO353_21005 0.82 +1.0 4,591,714 + AO353_21005 0.82 -0.5 4,591,714 + AO353_21005 0.82 -0.1 4,591,714 + AO353_21005 0.82 -2.1 4,591,714 + AO353_21005 0.82 +0.2 4,591,714 + AO353_21005 0.82 -1.1 4,591,714 + AO353_21005 0.82 -0.1 4,591,714 + AO353_21005 0.82 -0.5 4,591,715 - AO353_21005 0.82 -0.4 4,591,715 - AO353_21005 0.82 +0.3 4,591,715 - +1.1 4,591,715 - AO353_21005 0.82 +0.5 4,591,715 - AO353_21005 0.82 -0.5 4,591,715 - AO353_21005 0.82 -0.8 4,591,715 - AO353_21005 0.82 +1.8 4,591,726 + AO353_21005 0.83 +0.7 4,591,726 + AO353_21005 0.83 -0.2 4,591,727 - AO353_21005 0.84 -0.2 4,591,861 + -0.3 4,591,861 + -2.7 4,591,861 + -0.2 4,591,861 + +1.4 4,591,861 + +0.8 4,591,862 - -1.9 4,591,862 - +0.9 4,591,936 + +0.3 4,591,937 - +0.4 4,591,937 - -0.0 4,591,937 - -1.1 4,591,939 + -1.8 4,591,939 + -1.7 4,591,939 + +0.4 4,591,939 + +0.4 4,591,939 + -1.1 4,591,939 + +0.8 4,591,940 - -0.2 4,591,940 - +0.6 4,591,940 - +0.8 4,591,948 + -1.1 4,591,948 + +1.7 4,591,948 + +0.6 4,591,949 - +0.6 4,591,949 - -0.3
Or see this region's nucleotide sequence