Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20140 and AO353_20145 are separated by 127 nucleotides AO353_20145 and AO353_20150 are separated by 275 nucleotides AO353_20150 and AO353_20155 are separated by 32 nucleotides AO353_20155 and AO353_20160 are separated by 58 nucleotides AO353_20160 and AO353_20165 are separated by 77 nucleotides
AO353_20140: AO353_20140 - hypothetical protein, at 4,429,785 to 4,430,177
_20140
AO353_20145: AO353_20145 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase, at 4,430,305 to 4,431,159
_20145
AO353_20150: AO353_20150 - tRNA-Arg, at 4,431,435 to 4,431,511
_20150
AO353_20155: AO353_20155 - tRNA-His, at 4,431,544 to 4,431,619
_20155
AO353_20160: AO353_20160 - tRNA-Leu, at 4,431,678 to 4,431,762
_20160
AO353_20165: AO353_20165 - tRNA-His, at 4,431,840 to 4,431,915
_20165
Position (kb)
4430
4431
4432 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4429.364 kb on + strand at 4429.428 kb on + strand at 4429.505 kb on + strand at 4429.505 kb on + strand at 4429.560 kb on - strand at 4429.560 kb on - strand at 4429.611 kb on - strand at 4429.611 kb on - strand at 4429.627 kb on + strand at 4429.627 kb on + strand at 4429.628 kb on - strand at 4429.628 kb on - strand at 4429.628 kb on - strand at 4429.659 kb on + strand at 4429.659 kb on + strand at 4429.660 kb on - strand at 4429.660 kb on - strand at 4429.677 kb on + strand at 4429.677 kb on + strand at 4429.677 kb on + strand at 4429.677 kb on + strand at 4429.677 kb on + strand at 4429.678 kb on - strand at 4429.754 kb on + strand at 4429.779 kb on - strand at 4429.795 kb on + strand at 4429.795 kb on + strand at 4429.861 kb on - strand, within AO353_20140 at 4429.867 kb on + strand, within AO353_20140 at 4429.941 kb on + strand, within AO353_20140 at 4429.947 kb on - strand, within AO353_20140 at 4429.947 kb on - strand, within AO353_20140 at 4430.015 kb on + strand, within AO353_20140 at 4430.036 kb on + strand, within AO353_20140 at 4430.037 kb on - strand, within AO353_20140 at 4430.060 kb on + strand, within AO353_20140 at 4430.060 kb on + strand, within AO353_20140 at 4430.094 kb on + strand, within AO353_20140 at 4430.095 kb on - strand, within AO353_20140 at 4430.096 kb on + strand, within AO353_20140 at 4430.244 kb on - strand at 4431.620 kb on + strand at 4431.620 kb on + strand at 4431.663 kb on + strand at 4431.663 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.765 kb on + strand at 4431.765 kb on + strand at 4431.765 kb on + strand at 4431.765 kb on + strand at 4431.766 kb on - strand at 4431.830 kb on - strand at 4431.837 kb on - strand at 4431.837 kb on - strand at 4431.837 kb on - strand at 4431.848 kb on - strand, within AO353_20165 at 4431.916 kb on + strand at 4431.916 kb on + strand at 4431.965 kb on + strand at 4431.966 kb on - strand at 4431.966 kb on - strand at 4431.966 kb on - strand at 4431.971 kb on + strand at 4431.971 kb on + strand at 4431.972 kb on - strand at 4431.972 kb on - strand at 4431.972 kb on - strand at 4431.972 kb on - strand at 4432.021 kb on + strand at 4432.021 kb on + strand at 4432.021 kb on + strand at 4432.022 kb on - strand at 4432.022 kb on - strand at 4432.022 kb on - strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 4,429,364 + +0.1 4,429,428 + +1.1 4,429,505 + -0.5 4,429,505 + +1.0 4,429,560 - +0.7 4,429,560 - -0.6 4,429,611 - +0.5 4,429,611 - -0.2 4,429,627 + -1.1 4,429,627 + -0.5 4,429,628 - -0.0 4,429,628 - -0.5 4,429,628 - +1.3 4,429,659 + -1.7 4,429,659 + +1.3 4,429,660 - -1.1 4,429,660 - +1.1 4,429,677 + -0.6 4,429,677 + +0.0 4,429,677 + -1.6 4,429,677 + +0.4 4,429,677 + -0.2 4,429,678 - +0.1 4,429,754 + +0.3 4,429,779 - +1.5 4,429,795 + +0.2 4,429,795 + +0.5 4,429,861 - AO353_20140 0.19 +0.7 4,429,867 + AO353_20140 0.21 +1.0 4,429,941 + AO353_20140 0.40 -0.0 4,429,947 - AO353_20140 0.41 +0.1 4,429,947 - AO353_20140 0.41 +1.6 4,430,015 + AO353_20140 0.59 -0.7 4,430,036 + AO353_20140 0.64 -1.6 4,430,037 - AO353_20140 0.64 -1.0 4,430,060 + AO353_20140 0.70 +0.1 4,430,060 + AO353_20140 0.70 +1.1 4,430,094 + AO353_20140 0.79 +0.0 4,430,095 - AO353_20140 0.79 -1.4 4,430,096 + AO353_20140 0.79 +0.1 4,430,244 - +0.5 4,431,620 + -0.3 4,431,620 + -0.4 4,431,663 + -1.5 4,431,663 + +0.0 4,431,666 + +1.1 4,431,666 + +0.1 4,431,666 + +0.5 4,431,666 + +0.1 4,431,666 + -1.2 4,431,666 + +1.3 4,431,666 + -1.1 4,431,666 + +0.3 4,431,666 + +1.1 4,431,765 + -0.3 4,431,765 + -0.5 4,431,765 + +0.0 4,431,765 + -0.1 4,431,766 - -1.3 4,431,830 - +0.7 4,431,837 - +0.5 4,431,837 - -0.7 4,431,837 - +0.1 4,431,848 - AO353_20165 0.11 +1.5 4,431,916 + +1.4 4,431,916 + -0.2 4,431,965 + -0.5 4,431,966 - -0.3 4,431,966 - +0.4 4,431,966 - +0.1 4,431,971 + +1.5 4,431,971 + +0.2 4,431,972 - +0.2 4,431,972 - -0.2 4,431,972 - -0.6 4,431,972 - -1.6 4,432,021 + +1.0 4,432,021 + +0.7 4,432,021 + -0.2 4,432,022 - +0.5 4,432,022 - -0.1 4,432,022 - -1.8 4,432,104 + +0.6 4,432,104 + +0.9 4,432,104 + +0.3 4,432,104 + +0.1 4,432,104 + +0.7 4,432,104 + +0.4 4,432,104 + -0.1 4,432,104 + -0.6 4,432,104 + +0.2 4,432,104 + -1.2 4,432,104 + -1.0 4,432,104 + -0.8 4,432,104 + +0.3 4,432,104 + -0.3 4,432,104 + +0.8 4,432,104 + +1.0 4,432,104 + -1.6 4,432,104 + -0.2 4,432,104 + +1.2 4,432,104 + +0.4 4,432,104 + +3.3 4,432,104 + -0.1 4,432,104 + +2.7 4,432,105 - +0.4 4,432,105 - -1.4 4,432,105 - -0.7 4,432,105 - +0.5 4,432,105 - +0.5 4,432,105 - -1.5 4,432,105 - +0.6 4,432,105 - +0.9 4,432,105 - -0.5 4,432,105 - -1.0 4,432,105 - +1.4 4,432,105 - +1.6 4,432,105 - -1.9 4,432,105 - -0.2 4,432,105 - +0.1 4,432,105 - +1.1 4,432,105 - +2.6 4,432,105 - -1.0 4,432,105 - +1.5 4,432,105 - +0.8 4,432,106 + -1.6 4,432,106 + +0.7 4,432,106 + +0.3 4,432,106 + +0.5 4,432,106 + -0.2 4,432,106 + -0.2 4,432,106 + -1.1 4,432,106 + -0.4 4,432,106 + +0.9 4,432,106 + +1.8 4,432,106 + -0.2 4,432,106 + +0.1 4,432,106 + +0.1 4,432,106 + +0.0 4,432,106 + +0.1 4,432,106 + +0.3 4,432,106 + +2.0 4,432,106 + -0.1 4,432,106 + -0.0 4,432,106 + +1.4 4,432,106 + -1.0 4,432,106 + +1.1 4,432,106 + -0.5 4,432,106 + +0.4 4,432,106 + +0.2 4,432,107 - +0.1 4,432,107 - +0.1 4,432,107 - -0.7 4,432,107 - +2.9 4,432,107 - +0.8 4,432,107 - -0.4 4,432,107 - +0.5 4,432,107 - +0.7 4,432,107 - +0.9 4,432,107 - +1.1 4,432,107 - -1.0 4,432,107 - -0.6 4,432,108 + -0.5 4,432,108 + -1.0 4,432,108 + +1.4 4,432,108 + +1.0 4,432,108 + +2.9 4,432,108 + -0.9 4,432,108 + -0.2 4,432,108 + -0.2 4,432,108 + -0.7 4,432,108 + -0.2 4,432,108 + -0.2 4,432,108 + +1.3 4,432,108 + -1.2 4,432,108 + +1.6 4,432,108 + +1.1 4,432,108 + -0.5 4,432,108 + -0.0 4,432,108 + -0.2 4,432,108 + -0.5 4,432,108 + -0.2 4,432,108 + -0.5 4,432,108 + -2.0 4,432,108 + +0.9 4,432,108 + -1.0 4,432,109 - +1.1 4,432,109 - +1.1 4,432,109 - -0.4 4,432,109 - -0.2 4,432,109 - -1.0 4,432,109 - -0.3 4,432,109 - +0.1 4,432,109 - -0.5 4,432,109 - -0.7 4,432,109 - -1.0 4,432,109 - -0.0 4,432,109 - +0.3 4,432,109 - -0.9 4,432,109 - -2.0 4,432,109 - +0.1 4,432,109 - -0.8 4,432,109 - -1.5 4,432,109 - +0.8 4,432,109 - +1.9 4,432,109 - +1.1 4,432,109 - -0.2 4,432,109 - -1.2 4,432,109 - -0.7 4,432,109 - +0.1 4,432,109 - +2.0 4,432,109 - -1.0 4,432,109 - +0.5 4,432,109 - -0.9 4,432,110 + -1.0 4,432,110 + +0.5 4,432,110 + -0.4 4,432,110 + +0.8 4,432,110 + -0.6 4,432,110 + -0.9 4,432,110 + -0.6 4,432,110 + +0.7 4,432,110 + -0.3 4,432,110 + +1.0 4,432,110 + +1.7 4,432,111 - +0.3 4,432,111 - -1.3 4,432,111 - +0.2 4,432,111 - -0.1 4,432,111 - +0.1 4,432,111 - +2.0 4,432,111 - +0.9 4,432,111 - -0.7 4,432,111 - -0.2 4,432,111 - +2.3 4,432,147 + +0.1 4,432,147 + +0.5 4,432,147 + -1.1 4,432,147 + +0.9 4,432,147 + -1.1 4,432,148 - +0.8 4,432,148 - -1.0 4,432,148 - +0.0 4,432,148 - +0.9 4,432,148 - -2.3 4,432,148 - -2.2 4,432,148 - -0.0 4,432,148 - +1.3 4,432,148 - -0.6 4,432,148 - +2.1
Or see this region's nucleotide sequence