Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19975

Experiment: Cobalt chloride 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_19970 and AO353_19975 are separated by 387 nucleotidesAO353_19975 and AO353_19980 are separated by 23 nucleotides AO353_19970: AO353_19970 - peptidase, at 4,389,958 to 4,390,551 _19970 AO353_19975: AO353_19975 - serine hydrolase, at 4,390,939 to 4,393,254 _19975 AO353_19980: AO353_19980 - GTP-binding protein, at 4,393,278 to 4,394,552 _19980 Position (kb) 4390 4391 4392 4393 4394Strain fitness (log2 ratio) -2 -1 0 1 2at 4389.995 kb on + strandat 4390.097 kb on + strand, within AO353_19970at 4390.097 kb on + strand, within AO353_19970at 4390.098 kb on - strand, within AO353_19970at 4390.178 kb on + strand, within AO353_19970at 4390.178 kb on + strand, within AO353_19970at 4390.179 kb on - strand, within AO353_19970at 4390.179 kb on - strand, within AO353_19970at 4390.230 kb on + strand, within AO353_19970at 4390.231 kb on - strand, within AO353_19970at 4390.255 kb on + strand, within AO353_19970at 4390.256 kb on - strand, within AO353_19970at 4390.292 kb on + strand, within AO353_19970at 4390.293 kb on - strand, within AO353_19970at 4390.293 kb on - strand, within AO353_19970at 4390.293 kb on - strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.349 kb on + strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.350 kb on - strand, within AO353_19970at 4390.403 kb on + strand, within AO353_19970at 4390.403 kb on + strand, within AO353_19970at 4390.403 kb on + strand, within AO353_19970at 4390.403 kb on + strand, within AO353_19970at 4390.403 kb on + strand, within AO353_19970at 4390.404 kb on - strand, within AO353_19970at 4390.404 kb on - strand, within AO353_19970at 4390.404 kb on - strand, within AO353_19970at 4390.404 kb on - strand, within AO353_19970at 4390.404 kb on - strand, within AO353_19970at 4390.424 kb on + strand, within AO353_19970at 4390.425 kb on - strand, within AO353_19970at 4390.510 kb on + strandat 4390.580 kb on - strandat 4390.580 kb on - strandat 4390.580 kb on - strandat 4390.590 kb on - strandat 4390.768 kb on - strandat 4390.768 kb on - strandat 4390.768 kb on - strandat 4390.768 kb on - strandat 4390.768 kb on - strandat 4390.943 kb on + strandat 4390.943 kb on + strandat 4390.943 kb on + strandat 4390.943 kb on + strandat 4390.944 kb on - strandat 4390.944 kb on - strandat 4390.944 kb on - strandat 4391.384 kb on + strand, within AO353_19975at 4391.720 kb on + strandat 4391.720 kb on + strand, within AO353_19975at 4391.721 kb on - strand, within AO353_19975at 4391.721 kb on - strand, within AO353_19975at 4391.824 kb on + strand, within AO353_19975at 4391.825 kb on - strand, within AO353_19975at 4391.825 kb on - strand, within AO353_19975at 4391.825 kb on - strand, within AO353_19975at 4391.825 kb on - strand, within AO353_19975at 4391.825 kb on - strand, within AO353_19975at 4391.825 kb on - strand, within AO353_19975at 4391.881 kb on - strand, within AO353_19975at 4391.941 kb on + strand, within AO353_19975at 4392.291 kb on - strand, within AO353_19975at 4392.677 kb on + strand, within AO353_19975at 4392.677 kb on + strand, within AO353_19975at 4392.677 kb on + strand, within AO353_19975at 4392.677 kb on + strand, within AO353_19975at 4392.678 kb on - strand, within AO353_19975at 4392.678 kb on - strand, within AO353_19975at 4392.678 kb on - strand, within AO353_19975at 4392.678 kb on - strand, within AO353_19975at 4392.689 kb on + strand, within AO353_19975at 4392.758 kb on + strand, within AO353_19975at 4392.758 kb on + strand, within AO353_19975at 4392.758 kb on + strand, within AO353_19975at 4392.758 kb on + strand, within AO353_19975at 4392.758 kb on + strand, within AO353_19975at 4392.759 kb on - strand, within AO353_19975at 4392.759 kb on - strand, within AO353_19975at 4392.759 kb on - strand, within AO353_19975at 4392.759 kb on - strand, within AO353_19975at 4392.759 kb on - strand, within AO353_19975at 4392.759 kb on - strand, within AO353_19975at 4392.935 kb on + strand, within AO353_19975at 4392.935 kb on + strand, within AO353_19975at 4393.255 kb on + strandat 4393.256 kb on - strandat 4393.306 kb on + strandat 4393.306 kb on + strandat 4393.306 kb on + strandat 4393.307 kb on - strandat 4393.307 kb on - strandat 4393.326 kb on + strandat 4393.414 kb on + strand, within AO353_19980at 4393.415 kb on - strand, within AO353_19980at 4393.415 kb on - strand, within AO353_19980at 4393.550 kb on + strand, within AO353_19980at 4393.550 kb on + strand, within AO353_19980at 4393.550 kb on + strand, within AO353_19980at 4393.551 kb on - strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.580 kb on + strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.581 kb on - strand, within AO353_19980at 4393.582 kb on + strand, within AO353_19980at 4393.582 kb on + strand, within AO353_19980at 4393.583 kb on - strand, within AO353_19980at 4393.651 kb on + strand, within AO353_19980at 4393.652 kb on - strand, within AO353_19980at 4393.677 kb on + strand, within AO353_19980at 4393.677 kb on + strand, within AO353_19980at 4393.677 kb on + strand, within AO353_19980at 4393.677 kb on + strand, within AO353_19980at 4393.677 kb on + strand, within AO353_19980at 4393.677 kb on + strand, within AO353_19980at 4393.677 kb on + strand, within AO353_19980at 4393.678 kb on - strand, within AO353_19980at 4393.678 kb on - strand, within AO353_19980at 4393.678 kb on - strand, within AO353_19980at 4393.678 kb on - strand, within AO353_19980at 4393.678 kb on - strand, within AO353_19980at 4393.678 kb on - strand, within AO353_19980at 4393.678 kb on - strand, within AO353_19980at 4393.684 kb on + strand, within AO353_19980at 4393.684 kb on + strand, within AO353_19980at 4393.684 kb on + strand, within AO353_19980at 4393.685 kb on - strand, within AO353_19980at 4393.685 kb on - strand, within AO353_19980at 4393.685 kb on - strand, within AO353_19980at 4393.685 kb on - strand, within AO353_19980at 4393.685 kb on - strand, within AO353_19980at 4393.798 kb on + strand, within AO353_19980at 4393.798 kb on + strand, within AO353_19980at 4393.798 kb on + strand, within AO353_19980at 4393.798 kb on + strand, within AO353_19980at 4393.798 kb on + strand, within AO353_19980at 4393.799 kb on - strand, within AO353_19980at 4393.799 kb on - strand, within AO353_19980at 4393.799 kb on - strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.866 kb on + strand, within AO353_19980at 4393.867 kb on - strand, within AO353_19980at 4393.867 kb on - strand, within AO353_19980at 4393.867 kb on - strand, within AO353_19980at 4393.867 kb on - strand, within AO353_19980at 4394.005 kb on + strand, within AO353_19980at 4394.006 kb on - strand, within AO353_19980at 4394.022 kb on + strand, within AO353_19980at 4394.022 kb on + strand, within AO353_19980at 4394.022 kb on + strand, within AO353_19980at 4394.195 kb on + strand, within AO353_19980at 4394.196 kb on - strand, within AO353_19980at 4394.196 kb on - strand, within AO353_19980at 4394.236 kb on + strand, within AO353_19980at 4394.236 kb on + strand, within AO353_19980at 4394.237 kb on - strand, within AO353_19980at 4394.237 kb on - strand, within AO353_19980at 4394.237 kb on - strand, within AO353_19980at 4394.237 kb on - strand, within AO353_19980

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM
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4,389,995 + -1.1
4,390,097 + AO353_19970 0.23 +0.8
4,390,097 + AO353_19970 0.23 -0.9
4,390,098 - AO353_19970 0.24 +0.1
4,390,178 + AO353_19970 0.37 +0.3
4,390,178 + AO353_19970 0.37 +1.1
4,390,179 - AO353_19970 0.37 -1.1
4,390,179 - AO353_19970 0.37 -0.9
4,390,230 + AO353_19970 0.46 +0.6
4,390,231 - AO353_19970 0.46 +0.5
4,390,255 + AO353_19970 0.50 -1.3
4,390,256 - AO353_19970 0.50 +0.4
4,390,292 + AO353_19970 0.56 -0.6
4,390,293 - AO353_19970 0.56 -0.6
4,390,293 - AO353_19970 0.56 -0.5
4,390,293 - AO353_19970 0.56 -0.9
4,390,349 + AO353_19970 0.66 +0.1
4,390,349 + AO353_19970 0.66 -0.7
4,390,349 + AO353_19970 0.66 +0.8
4,390,349 + AO353_19970 0.66 +1.0
4,390,349 + AO353_19970 0.66 +0.8
4,390,349 + AO353_19970 0.66 -0.3
4,390,349 + AO353_19970 0.66 +0.9
4,390,349 + AO353_19970 0.66 +0.0
4,390,349 + AO353_19970 0.66 -0.4
4,390,349 + AO353_19970 0.66 -0.3
4,390,350 - AO353_19970 0.66 -0.2
4,390,350 - AO353_19970 0.66 -0.2
4,390,350 - AO353_19970 0.66 -0.1
4,390,350 - AO353_19970 0.66 +0.6
4,390,350 - AO353_19970 0.66 -0.3
4,390,350 - AO353_19970 0.66 +1.3
4,390,350 - AO353_19970 0.66 -1.6
4,390,350 - AO353_19970 0.66 -1.3
4,390,350 - AO353_19970 0.66 -0.2
4,390,350 - AO353_19970 0.66 +1.7
4,390,350 - AO353_19970 0.66 -2.0
4,390,350 - AO353_19970 0.66 -1.2
4,390,350 - AO353_19970 0.66 -0.4
4,390,403 + AO353_19970 0.75 +0.3
4,390,403 + AO353_19970 0.75 +0.0
4,390,403 + AO353_19970 0.75 +0.3
4,390,403 + AO353_19970 0.75 -0.8
4,390,403 + AO353_19970 0.75 +0.6
4,390,404 - AO353_19970 0.75 +0.3
4,390,404 - AO353_19970 0.75 +0.1
4,390,404 - AO353_19970 0.75 -1.2
4,390,404 - AO353_19970 0.75 +0.3
4,390,404 - AO353_19970 0.75 +1.0
4,390,424 + AO353_19970 0.78 -0.0
4,390,425 - AO353_19970 0.79 -0.4
4,390,510 + -1.4
4,390,580 - -2.4
4,390,580 - -0.3
4,390,580 - -0.3
4,390,590 - -1.2
4,390,768 - -0.2
4,390,768 - -0.3
4,390,768 - -1.2
4,390,768 - +0.7
4,390,768 - +2.0
4,390,943 + -0.6
4,390,943 + +0.2
4,390,943 + +0.6
4,390,943 + +1.1
4,390,944 - -0.4
4,390,944 - -0.1
4,390,944 - -0.2
4,391,384 + AO353_19975 0.19 -0.1
4,391,720 + +1.1
4,391,720 + AO353_19975 0.34 +0.6
4,391,721 - AO353_19975 0.34 -0.6
4,391,721 - AO353_19975 0.34 -1.2
4,391,824 + AO353_19975 0.38 +0.7
4,391,825 - AO353_19975 0.38 -1.1
4,391,825 - AO353_19975 0.38 +0.4
4,391,825 - AO353_19975 0.38 +0.7
4,391,825 - AO353_19975 0.38 +0.9
4,391,825 - AO353_19975 0.38 -0.7
4,391,825 - AO353_19975 0.38 -0.2
4,391,881 - AO353_19975 0.41 +1.9
4,391,941 + AO353_19975 0.43 -0.3
4,392,291 - AO353_19975 0.58 -0.7
4,392,677 + AO353_19975 0.75 +0.3
4,392,677 + AO353_19975 0.75 -0.9
4,392,677 + AO353_19975 0.75 -0.2
4,392,677 + AO353_19975 0.75 -1.3
4,392,678 - AO353_19975 0.75 +1.0
4,392,678 - AO353_19975 0.75 +0.6
4,392,678 - AO353_19975 0.75 -1.6
4,392,678 - AO353_19975 0.75 -0.9
4,392,689 + AO353_19975 0.76 +0.2
4,392,758 + AO353_19975 0.79 -1.3
4,392,758 + AO353_19975 0.79 -0.7
4,392,758 + AO353_19975 0.79 -0.5
4,392,758 + AO353_19975 0.79 -1.4
4,392,758 + AO353_19975 0.79 +0.2
4,392,759 - AO353_19975 0.79 +0.7
4,392,759 - AO353_19975 0.79 +0.2
4,392,759 - AO353_19975 0.79 -0.1
4,392,759 - AO353_19975 0.79 -0.9
4,392,759 - AO353_19975 0.79 +1.3
4,392,759 - AO353_19975 0.79 +0.4
4,392,935 + AO353_19975 0.86 +0.4
4,392,935 + AO353_19975 0.86 -0.0
4,393,255 + -1.2
4,393,256 - -0.3
4,393,306 + +0.1
4,393,306 + +0.1
4,393,306 + -1.1
4,393,307 - +0.2
4,393,307 - +0.4
4,393,326 + +0.7
4,393,414 + AO353_19980 0.11 +0.3
4,393,415 - AO353_19980 0.11 +1.1
4,393,415 - AO353_19980 0.11 -0.0
4,393,550 + AO353_19980 0.21 +0.1
4,393,550 + AO353_19980 0.21 -0.8
4,393,550 + AO353_19980 0.21 +0.8
4,393,551 - AO353_19980 0.21 +0.7
4,393,580 + AO353_19980 0.24 -2.2
4,393,580 + AO353_19980 0.24 +0.6
4,393,580 + AO353_19980 0.24 -0.6
4,393,580 + AO353_19980 0.24 +0.9
4,393,580 + AO353_19980 0.24 -1.9
4,393,580 + AO353_19980 0.24 -0.2
4,393,580 + AO353_19980 0.24 -0.6
4,393,580 + AO353_19980 0.24 +0.8
4,393,581 - AO353_19980 0.24 +0.1
4,393,581 - AO353_19980 0.24 +0.8
4,393,581 - AO353_19980 0.24 -0.4
4,393,581 - AO353_19980 0.24 +0.6
4,393,581 - AO353_19980 0.24 +1.8
4,393,581 - AO353_19980 0.24 +0.5
4,393,581 - AO353_19980 0.24 +1.7
4,393,581 - AO353_19980 0.24 +1.1
4,393,582 + AO353_19980 0.24 -1.9
4,393,582 + AO353_19980 0.24 -0.0
4,393,583 - AO353_19980 0.24 -0.9
4,393,651 + AO353_19980 0.29 -0.3
4,393,652 - AO353_19980 0.29 -2.2
4,393,677 + AO353_19980 0.31 +1.0
4,393,677 + AO353_19980 0.31 -0.1
4,393,677 + AO353_19980 0.31 +1.1
4,393,677 + AO353_19980 0.31 +0.4
4,393,677 + AO353_19980 0.31 +0.9
4,393,677 + AO353_19980 0.31 -0.4
4,393,677 + AO353_19980 0.31 +0.3
4,393,678 - AO353_19980 0.31 -0.2
4,393,678 - AO353_19980 0.31 -0.2
4,393,678 - AO353_19980 0.31 -0.3
4,393,678 - AO353_19980 0.31 -0.7
4,393,678 - AO353_19980 0.31 -1.0
4,393,678 - AO353_19980 0.31 +0.2
4,393,678 - AO353_19980 0.31 -0.0
4,393,684 + AO353_19980 0.32 -0.9
4,393,684 + AO353_19980 0.32 -0.7
4,393,684 + AO353_19980 0.32 +2.5
4,393,685 - AO353_19980 0.32 -0.8
4,393,685 - AO353_19980 0.32 -0.4
4,393,685 - AO353_19980 0.32 -0.4
4,393,685 - AO353_19980 0.32 -2.2
4,393,685 - AO353_19980 0.32 -1.1
4,393,798 + AO353_19980 0.41 +1.3
4,393,798 + AO353_19980 0.41 +0.4
4,393,798 + AO353_19980 0.41 -0.3
4,393,798 + AO353_19980 0.41 +0.1
4,393,798 + AO353_19980 0.41 -1.0
4,393,799 - AO353_19980 0.41 +0.4
4,393,799 - AO353_19980 0.41 -0.1
4,393,799 - AO353_19980 0.41 -0.7
4,393,866 + AO353_19980 0.46 +0.7
4,393,866 + AO353_19980 0.46 -0.6
4,393,866 + AO353_19980 0.46 -1.0
4,393,866 + AO353_19980 0.46 -0.4
4,393,866 + AO353_19980 0.46 +0.6
4,393,866 + AO353_19980 0.46 +0.8
4,393,866 + AO353_19980 0.46 +1.3
4,393,866 + AO353_19980 0.46 -0.4
4,393,866 + AO353_19980 0.46 -0.2
4,393,866 + AO353_19980 0.46 +1.3
4,393,867 - AO353_19980 0.46 -2.0
4,393,867 - AO353_19980 0.46 +1.3
4,393,867 - AO353_19980 0.46 -2.4
4,393,867 - AO353_19980 0.46 -1.4
4,394,005 + AO353_19980 0.57 -0.9
4,394,006 - AO353_19980 0.57 +1.1
4,394,022 + AO353_19980 0.58 -0.7
4,394,022 + AO353_19980 0.58 -0.2
4,394,022 + AO353_19980 0.58 -1.2
4,394,195 + AO353_19980 0.72 +0.4
4,394,196 - AO353_19980 0.72 +1.7
4,394,196 - AO353_19980 0.72 +0.3
4,394,236 + AO353_19980 0.75 +0.1
4,394,236 + AO353_19980 0.75 -0.0
4,394,237 - AO353_19980 0.75 -0.7
4,394,237 - AO353_19980 0.75 -0.4
4,394,237 - AO353_19980 0.75 -0.7
4,394,237 - AO353_19980 0.75 -0.9

Or see this region's nucleotide sequence