Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18920 and AO353_18925 are separated by 211 nucleotides AO353_18925 and AO353_18930 are separated by 105 nucleotides
AO353_18920: AO353_18920 - potassium-transporting ATPase subunit B, at 4,156,528 to 4,158,606
_18920
AO353_18925: AO353_18925 - ATPase, at 4,158,818 to 4,159,363
_18925
AO353_18930: AO353_18930 - histidine kinase, at 4,159,469 to 4,162,120
_18930
Position (kb)
4158
4159
4160 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4157.913 kb on + strand, within AO353_18920 at 4158.252 kb on + strand, within AO353_18920 at 4158.253 kb on - strand, within AO353_18920 at 4158.316 kb on + strand, within AO353_18920 at 4158.316 kb on + strand, within AO353_18920 at 4158.317 kb on - strand, within AO353_18920 at 4158.317 kb on - strand, within AO353_18920 at 4158.317 kb on - strand, within AO353_18920 at 4158.526 kb on + strand at 4158.526 kb on + strand at 4158.526 kb on + strand at 4158.527 kb on - strand at 4158.527 kb on - strand at 4158.605 kb on - strand at 4158.693 kb on + strand at 4158.694 kb on - strand at 4158.713 kb on - strand at 4158.713 kb on - strand at 4158.713 kb on - strand at 4158.774 kb on + strand at 4158.774 kb on + strand at 4158.774 kb on + strand at 4158.774 kb on + strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.793 kb on + strand at 4158.793 kb on + strand at 4158.793 kb on + strand at 4158.794 kb on - strand at 4158.794 kb on - strand at 4158.794 kb on - strand at 4158.794 kb on - strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4159.053 kb on + strand, within AO353_18925 at 4159.085 kb on - strand, within AO353_18925 at 4159.261 kb on - strand, within AO353_18925 at 4159.309 kb on - strand at 4159.361 kb on + strand at 4159.393 kb on + strand at 4159.394 kb on - strand at 4159.403 kb on + strand at 4159.403 kb on + strand at 4159.403 kb on + strand at 4159.404 kb on - strand at 4159.416 kb on - strand at 4159.416 kb on - strand at 4159.509 kb on + strand at 4159.509 kb on + strand at 4159.575 kb on - strand at 4159.575 kb on - strand at 4159.575 kb on - strand at 4159.575 kb on - strand at 4159.605 kb on + strand at 4159.605 kb on + strand at 4159.606 kb on - strand at 4159.712 kb on + strand at 4159.713 kb on - strand at 4159.910 kb on - strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.982 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.049 kb on - strand, within AO353_18930 at 4160.049 kb on - strand, within AO353_18930 at 4160.256 kb on + strand, within AO353_18930
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 4,157,913 + AO353_18920 0.67 +0.4 4,158,252 + AO353_18920 0.83 +0.2 4,158,253 - AO353_18920 0.83 -1.2 4,158,316 + AO353_18920 0.86 -0.8 4,158,316 + AO353_18920 0.86 +0.5 4,158,317 - AO353_18920 0.86 -0.1 4,158,317 - AO353_18920 0.86 +0.8 4,158,317 - AO353_18920 0.86 -0.3 4,158,526 + +0.6 4,158,526 + +0.8 4,158,526 + -0.2 4,158,527 - +1.9 4,158,527 - +0.2 4,158,605 - -0.4 4,158,693 + +0.2 4,158,694 - -0.4 4,158,713 - -0.6 4,158,713 - -0.5 4,158,713 - -0.8 4,158,774 + -1.0 4,158,774 + +0.4 4,158,774 + +0.3 4,158,774 + +1.1 4,158,775 - +1.2 4,158,775 - +0.1 4,158,775 - +1.3 4,158,775 - +0.1 4,158,775 - +2.2 4,158,793 + -1.5 4,158,793 + +1.3 4,158,793 + +1.9 4,158,794 - +0.6 4,158,794 - -0.6 4,158,794 - +1.3 4,158,794 - -1.4 4,158,826 + -0.2 4,158,826 + +0.1 4,158,826 + -0.9 4,158,826 + +0.3 4,158,826 + -1.5 4,158,826 + -0.9 4,158,826 + +0.0 4,158,826 + -0.2 4,158,826 + -0.4 4,158,827 - -0.2 4,158,827 - -0.4 4,158,827 - +0.4 4,158,827 - -0.2 4,158,827 - -0.8 4,158,827 - +2.2 4,158,827 - -0.1 4,158,827 - -1.6 4,159,053 + AO353_18925 0.43 -1.1 4,159,085 - AO353_18925 0.49 -0.2 4,159,261 - AO353_18925 0.81 -1.0 4,159,309 - +1.7 4,159,361 + -0.0 4,159,393 + -0.2 4,159,394 - +0.3 4,159,403 + -0.3 4,159,403 + -2.4 4,159,403 + +0.5 4,159,404 - +0.4 4,159,416 - +2.2 4,159,416 - +0.4 4,159,509 + -0.9 4,159,509 + +1.6 4,159,575 - -0.8 4,159,575 - -0.6 4,159,575 - -0.2 4,159,575 - +1.0 4,159,605 + +0.7 4,159,605 + +0.7 4,159,606 - -0.5 4,159,712 + -1.0 4,159,713 - -1.2 4,159,910 - AO353_18930 0.17 +0.3 4,159,938 + AO353_18930 0.18 +1.4 4,159,938 + AO353_18930 0.18 -0.1 4,159,938 + AO353_18930 0.18 -0.6 4,159,938 + AO353_18930 0.18 -0.1 4,159,938 + AO353_18930 0.18 -1.5 4,159,939 - AO353_18930 0.18 -1.8 4,159,939 - AO353_18930 0.18 -0.5 4,159,939 - AO353_18930 0.18 +0.0 4,159,939 - AO353_18930 0.18 -1.0 4,159,939 - AO353_18930 0.18 -0.4 4,159,982 + AO353_18930 0.19 -1.5 4,160,048 + AO353_18930 0.22 -0.3 4,160,048 + AO353_18930 0.22 +0.2 4,160,048 + AO353_18930 0.22 +0.1 4,160,048 + AO353_18930 0.22 -0.8 4,160,049 - AO353_18930 0.22 -0.9 4,160,049 - AO353_18930 0.22 +0.8 4,160,256 + AO353_18930 0.30 -0.7
Or see this region's nucleotide sequence