Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14015 and AO353_14020 are separated by 259 nucleotides AO353_14020 and AO353_14025 are separated by 280 nucleotides
AO353_14015: AO353_14015 - C4-dicarboxylate ABC transporter, at 3,111,778 to 3,113,091
_14015
AO353_14020: AO353_14020 - serine hydroxymethyltransferase, at 3,113,351 to 3,114,604
_14020
AO353_14025: AO353_14025 - diguanylate phosphodiesterase, at 3,114,885 to 3,118,733
_14025
Position (kb)
3113
3114
3115 Strain fitness (log2 ratio)
-1
0
1
2 at 3112.409 kb on + strand, within AO353_14015 at 3112.409 kb on + strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.457 kb on + strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.853 kb on + strand, within AO353_14015 at 3112.853 kb on + strand, within AO353_14015 at 3112.853 kb on + strand, within AO353_14015 at 3112.853 kb on + strand, within AO353_14015 at 3112.853 kb on + strand, within AO353_14015 at 3112.853 kb on + strand, within AO353_14015 at 3112.853 kb on + strand, within AO353_14015 at 3112.854 kb on - strand, within AO353_14015 at 3112.854 kb on - strand, within AO353_14015 at 3112.854 kb on - strand, within AO353_14015 at 3112.854 kb on - strand, within AO353_14015 at 3112.854 kb on - strand, within AO353_14015 at 3112.911 kb on + strand, within AO353_14015 at 3112.911 kb on + strand, within AO353_14015 at 3112.911 kb on + strand, within AO353_14015 at 3112.991 kb on - strand at 3112.991 kb on - strand at 3112.991 kb on - strand at 3112.991 kb on - strand at 3112.991 kb on - strand at 3112.991 kb on - strand at 3112.991 kb on - strand at 3112.991 kb on - strand at 3113.004 kb on - strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.151 kb on + strand at 3113.152 kb on - strand at 3113.152 kb on - strand at 3113.152 kb on - strand at 3113.152 kb on - strand at 3113.194 kb on + strand at 3113.195 kb on - strand at 3113.352 kb on + strand at 3114.492 kb on + strand at 3114.648 kb on - strand at 3114.648 kb on - strand at 3114.671 kb on + strand at 3114.671 kb on + strand at 3114.671 kb on + strand at 3114.671 kb on + strand at 3114.672 kb on - strand at 3114.672 kb on - strand at 3114.672 kb on - strand at 3114.672 kb on - strand at 3114.729 kb on - strand at 3114.962 kb on - strand at 3115.165 kb on + strand at 3115.165 kb on + strand at 3115.165 kb on + strand at 3115.165 kb on + strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.166 kb on - strand at 3115.181 kb on - strand at 3115.274 kb on + strand, within AO353_14025 at 3115.274 kb on + strand, within AO353_14025 at 3115.581 kb on - strand, within AO353_14025
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 3,112,409 + AO353_14015 0.48 +0.8 3,112,409 + AO353_14015 0.48 +0.7 3,112,410 - AO353_14015 0.48 -0.4 3,112,410 - AO353_14015 0.48 +0.8 3,112,410 - AO353_14015 0.48 +0.2 3,112,410 - AO353_14015 0.48 -0.8 3,112,410 - AO353_14015 0.48 +0.3 3,112,410 - AO353_14015 0.48 +0.7 3,112,457 + AO353_14015 0.52 +0.3 3,112,458 - AO353_14015 0.52 -0.4 3,112,458 - AO353_14015 0.52 -1.0 3,112,458 - AO353_14015 0.52 +1.2 3,112,458 - AO353_14015 0.52 +0.1 3,112,458 - AO353_14015 0.52 -0.8 3,112,853 + AO353_14015 0.82 +1.4 3,112,853 + AO353_14015 0.82 -1.1 3,112,853 + AO353_14015 0.82 +0.4 3,112,853 + AO353_14015 0.82 -0.2 3,112,853 + AO353_14015 0.82 +1.4 3,112,853 + AO353_14015 0.82 +1.6 3,112,853 + AO353_14015 0.82 +0.4 3,112,854 - AO353_14015 0.82 -0.4 3,112,854 - AO353_14015 0.82 -0.6 3,112,854 - AO353_14015 0.82 +1.8 3,112,854 - AO353_14015 0.82 -1.4 3,112,854 - AO353_14015 0.82 -0.3 3,112,911 + AO353_14015 0.86 +0.2 3,112,911 + AO353_14015 0.86 -1.4 3,112,911 + AO353_14015 0.86 -1.1 3,112,991 - -1.7 3,112,991 - +0.6 3,112,991 - +0.4 3,112,991 - -0.9 3,112,991 - -0.6 3,112,991 - -1.2 3,112,991 - +1.1 3,112,991 - -1.3 3,113,004 - -0.3 3,113,151 + +0.6 3,113,151 + +0.6 3,113,151 + +0.8 3,113,151 + +0.6 3,113,151 + +0.8 3,113,151 + -1.3 3,113,151 + +1.3 3,113,151 + -1.2 3,113,151 + +1.7 3,113,151 + -0.8 3,113,152 - -0.1 3,113,152 - -0.5 3,113,152 - +1.0 3,113,152 - -0.3 3,113,194 + +1.1 3,113,195 - +1.1 3,113,352 + -1.7 3,114,492 + -0.3 3,114,648 - +0.7 3,114,648 - -0.8 3,114,671 + -1.7 3,114,671 + +1.1 3,114,671 + -1.0 3,114,671 + +1.0 3,114,672 - +0.8 3,114,672 - +0.1 3,114,672 - +0.3 3,114,672 - -1.2 3,114,729 - +1.0 3,114,962 - +0.5 3,115,165 + -0.8 3,115,165 + -1.0 3,115,165 + -0.9 3,115,165 + -1.1 3,115,166 - -1.5 3,115,166 - +0.5 3,115,166 - -0.5 3,115,166 - -0.9 3,115,166 - -1.2 3,115,166 - +0.2 3,115,166 - +0.6 3,115,166 - +1.1 3,115,166 - -0.0 3,115,166 - -0.7 3,115,181 - +0.4 3,115,274 + AO353_14025 0.10 -0.4 3,115,274 + AO353_14025 0.10 -0.5 3,115,581 - AO353_14025 0.18 -1.1
Or see this region's nucleotide sequence