Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13900 and AO353_13905 are separated by 55 nucleotides AO353_13905 and AO353_13910 overlap by 4 nucleotides
AO353_13900: AO353_13900 - kinase, at 3,089,009 to 3,089,902
_13900
AO353_13905: AO353_13905 - tRNA (uracil-5-)-methyltransferase, at 3,089,958 to 3,091,037
_13905
AO353_13910: AO353_13910 - guanine permease, at 3,091,034 to 3,092,329
_13910
Position (kb)
3089
3090
3091
3092 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3088.983 kb on + strand at 3088.984 kb on - strand at 3088.984 kb on - strand at 3088.984 kb on - strand at 3088.986 kb on + strand at 3088.986 kb on + strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.086 kb on + strand at 3089.102 kb on + strand, within AO353_13900 at 3089.102 kb on + strand, within AO353_13900 at 3089.102 kb on + strand, within AO353_13900 at 3089.102 kb on + strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.128 kb on - strand, within AO353_13900 at 3089.128 kb on - strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.158 kb on + strand, within AO353_13900 at 3089.159 kb on - strand, within AO353_13900 at 3089.187 kb on - strand, within AO353_13900 at 3089.390 kb on + strand, within AO353_13900 at 3089.450 kb on + strand, within AO353_13900 at 3089.450 kb on + strand, within AO353_13900 at 3089.451 kb on - strand, within AO353_13900 at 3089.451 kb on - strand, within AO353_13900 at 3089.451 kb on - strand, within AO353_13900 at 3089.491 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.642 kb on + strand, within AO353_13900 at 3089.642 kb on + strand, within AO353_13900 at 3089.642 kb on + strand, within AO353_13900 at 3089.643 kb on + strand, within AO353_13900 at 3089.643 kb on - strand, within AO353_13900 at 3089.643 kb on - strand, within AO353_13900 at 3089.643 kb on - strand, within AO353_13900 at 3089.681 kb on + strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.705 kb on + strand, within AO353_13900 at 3089.705 kb on + strand, within AO353_13900 at 3089.705 kb on + strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.866 kb on + strand at 3089.866 kb on + strand at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.187 kb on + strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.407 kb on - strand, within AO353_13905 at 3090.407 kb on - strand, within AO353_13905 at 3090.407 kb on - strand, within AO353_13905 at 3090.448 kb on + strand, within AO353_13905 at 3090.448 kb on + strand, within AO353_13905 at 3090.449 kb on - strand, within AO353_13905 at 3090.449 kb on - strand, within AO353_13905 at 3090.449 kb on - strand, within AO353_13905 at 3090.518 kb on - strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.603 kb on + strand, within AO353_13905 at 3090.673 kb on + strand, within AO353_13905 at 3090.673 kb on + strand, within AO353_13905 at 3090.865 kb on + strand, within AO353_13905 at 3090.866 kb on - strand, within AO353_13905 at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.016 kb on - strand at 3091.016 kb on - strand at 3091.016 kb on - strand at 3091.016 kb on - strand at 3091.176 kb on + strand, within AO353_13910 at 3091.176 kb on + strand, within AO353_13910 at 3091.176 kb on + strand, within AO353_13910 at 3091.176 kb on + strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.242 kb on - strand, within AO353_13910 at 3091.242 kb on - strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.423 kb on - strand, within AO353_13910 at 3091.423 kb on - strand, within AO353_13910 at 3091.568 kb on - strand, within AO353_13910 at 3091.568 kb on - strand, within AO353_13910
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 3,088,983 + +2.2 3,088,984 - +1.1 3,088,984 - +0.8 3,088,984 - -0.6 3,088,986 + -0.3 3,088,986 + -0.5 3,088,987 - +0.4 3,088,987 - -1.1 3,088,987 - -0.6 3,088,987 - -0.0 3,088,987 - -1.2 3,089,000 + -1.7 3,089,000 + -0.2 3,089,000 + -0.5 3,089,000 + -1.1 3,089,000 + -1.5 3,089,000 + +0.9 3,089,000 + -2.6 3,089,001 - -0.2 3,089,001 - -0.4 3,089,001 - -1.8 3,089,001 - -0.7 3,089,001 - -0.2 3,089,001 - +1.8 3,089,001 - +0.8 3,089,086 + -0.2 3,089,102 + AO353_13900 0.10 -0.2 3,089,102 + AO353_13900 0.10 +0.2 3,089,102 + AO353_13900 0.10 -0.6 3,089,102 + AO353_13900 0.10 +0.5 3,089,103 - AO353_13900 0.11 -1.4 3,089,103 - AO353_13900 0.11 -1.4 3,089,103 - AO353_13900 0.11 +1.8 3,089,103 - AO353_13900 0.11 -1.1 3,089,103 - AO353_13900 0.11 -0.1 3,089,127 + AO353_13900 0.13 -0.9 3,089,127 + AO353_13900 0.13 -0.5 3,089,127 + AO353_13900 0.13 -0.9 3,089,127 + AO353_13900 0.13 +0.6 3,089,127 + AO353_13900 0.13 -0.6 3,089,127 + AO353_13900 0.13 -0.3 3,089,128 - AO353_13900 0.13 +1.1 3,089,128 - AO353_13900 0.13 +1.2 3,089,144 + AO353_13900 0.15 -0.4 3,089,144 + AO353_13900 0.15 +0.8 3,089,144 + AO353_13900 0.15 +2.1 3,089,144 + AO353_13900 0.15 +1.0 3,089,144 + AO353_13900 0.15 +2.4 3,089,144 + AO353_13900 0.15 +1.4 3,089,145 - AO353_13900 0.15 -0.6 3,089,145 - AO353_13900 0.15 -0.1 3,089,145 - AO353_13900 0.15 +0.2 3,089,145 - AO353_13900 0.15 -0.2 3,089,145 - AO353_13900 0.15 -1.0 3,089,158 + AO353_13900 0.17 -0.9 3,089,159 - AO353_13900 0.17 +0.3 3,089,187 - AO353_13900 0.20 +1.0 3,089,390 + AO353_13900 0.43 -0.2 3,089,450 + AO353_13900 0.49 +1.9 3,089,450 + AO353_13900 0.49 +1.3 3,089,451 - AO353_13900 0.49 -0.2 3,089,451 - AO353_13900 0.49 -0.0 3,089,451 - AO353_13900 0.49 -0.0 3,089,491 + AO353_13900 0.54 -1.3 3,089,529 + AO353_13900 0.58 +1.6 3,089,529 + AO353_13900 0.58 +0.4 3,089,529 + AO353_13900 0.58 -0.7 3,089,529 + AO353_13900 0.58 -2.1 3,089,529 + AO353_13900 0.58 -0.2 3,089,529 + AO353_13900 0.58 -1.6 3,089,529 + AO353_13900 0.58 -2.0 3,089,530 - AO353_13900 0.58 +0.7 3,089,530 - AO353_13900 0.58 -0.4 3,089,530 - AO353_13900 0.58 -1.3 3,089,530 - AO353_13900 0.58 +0.2 3,089,530 - AO353_13900 0.58 -1.4 3,089,530 - AO353_13900 0.58 +0.3 3,089,530 - AO353_13900 0.58 +1.4 3,089,642 + AO353_13900 0.71 +0.6 3,089,642 + AO353_13900 0.71 -0.0 3,089,642 + AO353_13900 0.71 -0.6 3,089,643 + AO353_13900 0.71 -0.1 3,089,643 - AO353_13900 0.71 +0.6 3,089,643 - AO353_13900 0.71 +0.2 3,089,643 - AO353_13900 0.71 +0.1 3,089,681 + AO353_13900 0.75 -0.2 3,089,682 - AO353_13900 0.75 -1.5 3,089,682 - AO353_13900 0.75 +0.9 3,089,682 - AO353_13900 0.75 -1.9 3,089,682 - AO353_13900 0.75 +0.3 3,089,705 + AO353_13900 0.78 +0.3 3,089,705 + AO353_13900 0.78 +0.4 3,089,705 + AO353_13900 0.78 +0.1 3,089,706 - AO353_13900 0.78 -1.6 3,089,706 - AO353_13900 0.78 -0.4 3,089,706 - AO353_13900 0.78 -1.0 3,089,706 - AO353_13900 0.78 +1.0 3,089,866 + -2.2 3,089,866 + -2.2 3,090,097 + AO353_13905 0.13 -0.9 3,090,097 + AO353_13905 0.13 -0.2 3,090,097 + AO353_13905 0.13 -1.1 3,090,097 + AO353_13905 0.13 +1.6 3,090,097 + AO353_13905 0.13 -2.7 3,090,097 + AO353_13905 0.13 -1.7 3,090,097 + AO353_13905 0.13 -0.5 3,090,097 + AO353_13905 0.13 +0.2 3,090,097 + AO353_13905 0.13 -0.9 3,090,098 - AO353_13905 0.13 -2.4 3,090,098 - AO353_13905 0.13 +0.8 3,090,098 - AO353_13905 0.13 -0.5 3,090,098 - AO353_13905 0.13 -1.2 3,090,098 - AO353_13905 0.13 -1.3 3,090,098 - AO353_13905 0.13 +1.2 3,090,098 - AO353_13905 0.13 -0.9 3,090,098 - AO353_13905 0.13 +0.1 3,090,187 + AO353_13905 0.21 -1.1 3,090,188 - AO353_13905 0.21 -0.9 3,090,188 - AO353_13905 0.21 -0.6 3,090,188 - AO353_13905 0.21 -2.0 3,090,188 - AO353_13905 0.21 +0.2 3,090,406 + AO353_13905 0.41 -0.6 3,090,406 + AO353_13905 0.41 -0.9 3,090,406 + AO353_13905 0.41 +0.2 3,090,406 + AO353_13905 0.41 -1.9 3,090,406 + AO353_13905 0.41 -1.1 3,090,406 + AO353_13905 0.41 -2.1 3,090,406 + AO353_13905 0.41 -0.2 3,090,407 - AO353_13905 0.42 -2.4 3,090,407 - AO353_13905 0.42 -1.2 3,090,407 - AO353_13905 0.42 -2.4 3,090,448 + AO353_13905 0.45 -1.1 3,090,448 + AO353_13905 0.45 +0.8 3,090,449 - AO353_13905 0.45 +1.2 3,090,449 - AO353_13905 0.45 -1.0 3,090,449 - AO353_13905 0.45 -0.6 3,090,518 - AO353_13905 0.52 -0.4 3,090,559 + AO353_13905 0.56 -1.3 3,090,559 + AO353_13905 0.56 +0.2 3,090,559 + AO353_13905 0.56 -1.4 3,090,559 + AO353_13905 0.56 -1.7 3,090,559 + AO353_13905 0.56 -1.4 3,090,559 + AO353_13905 0.56 +1.0 3,090,559 + AO353_13905 0.56 -0.4 3,090,559 + AO353_13905 0.56 -0.4 3,090,559 + AO353_13905 0.56 -2.8 3,090,559 + AO353_13905 0.56 -1.0 3,090,559 + AO353_13905 0.56 -0.9 3,090,559 + AO353_13905 0.56 -1.0 3,090,559 + AO353_13905 0.56 -0.8 3,090,559 + AO353_13905 0.56 +1.0 3,090,559 + AO353_13905 0.56 -1.8 3,090,559 + AO353_13905 0.56 -2.3 3,090,559 + AO353_13905 0.56 -0.6 3,090,559 + AO353_13905 0.56 -0.6 3,090,559 + AO353_13905 0.56 +0.8 3,090,559 + AO353_13905 0.56 -1.6 3,090,559 + AO353_13905 0.56 -1.3 3,090,560 - AO353_13905 0.56 -1.6 3,090,560 - AO353_13905 0.56 +1.8 3,090,560 - AO353_13905 0.56 -0.1 3,090,560 - AO353_13905 0.56 -0.6 3,090,560 - AO353_13905 0.56 -1.2 3,090,560 - AO353_13905 0.56 -0.6 3,090,560 - AO353_13905 0.56 -2.6 3,090,560 - AO353_13905 0.56 +1.6 3,090,560 - AO353_13905 0.56 -0.8 3,090,560 - AO353_13905 0.56 -2.0 3,090,560 - AO353_13905 0.56 -2.6 3,090,560 - AO353_13905 0.56 -2.8 3,090,560 - AO353_13905 0.56 -1.3 3,090,560 - AO353_13905 0.56 -0.0 3,090,560 - AO353_13905 0.56 -0.9 3,090,560 - AO353_13905 0.56 -2.7 3,090,560 - AO353_13905 0.56 -2.7 3,090,560 - AO353_13905 0.56 -1.9 3,090,560 - AO353_13905 0.56 -0.8 3,090,603 + AO353_13905 0.60 -2.1 3,090,673 + AO353_13905 0.66 -2.1 3,090,673 + AO353_13905 0.66 +0.8 3,090,865 + AO353_13905 0.84 +0.2 3,090,866 - AO353_13905 0.84 +1.6 3,091,015 + -0.4 3,091,015 + -0.3 3,091,015 + -0.8 3,091,015 + -1.3 3,091,015 + -2.5 3,091,015 + -1.8 3,091,015 + +0.4 3,091,016 - -1.0 3,091,016 - +0.6 3,091,016 - +0.4 3,091,016 - -0.4 3,091,176 + AO353_13910 0.11 -0.6 3,091,176 + AO353_13910 0.11 -0.0 3,091,176 + AO353_13910 0.11 -0.3 3,091,176 + AO353_13910 0.11 +1.8 3,091,177 - AO353_13910 0.11 -1.1 3,091,177 - AO353_13910 0.11 -1.6 3,091,177 - AO353_13910 0.11 +0.7 3,091,177 - AO353_13910 0.11 -0.3 3,091,177 - AO353_13910 0.11 +0.3 3,091,177 - AO353_13910 0.11 -1.3 3,091,177 - AO353_13910 0.11 -2.9 3,091,177 - AO353_13910 0.11 -1.6 3,091,241 + AO353_13910 0.16 -1.8 3,091,241 + AO353_13910 0.16 -2.3 3,091,241 + AO353_13910 0.16 -2.2 3,091,241 + AO353_13910 0.16 -0.3 3,091,242 - AO353_13910 0.16 -0.2 3,091,242 - AO353_13910 0.16 -1.5 3,091,422 + AO353_13910 0.30 +0.1 3,091,422 + AO353_13910 0.30 -0.6 3,091,422 + AO353_13910 0.30 +0.7 3,091,422 + AO353_13910 0.30 -0.9 3,091,422 + AO353_13910 0.30 +0.7 3,091,422 + AO353_13910 0.30 -0.3 3,091,422 + AO353_13910 0.30 -1.5 3,091,423 - AO353_13910 0.30 -0.7 3,091,423 - AO353_13910 0.30 +0.8 3,091,568 - AO353_13910 0.41 +0.6 3,091,568 - AO353_13910 0.41 -0.6
Or see this region's nucleotide sequence