Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13560 and AO353_13565 are separated by 225 nucleotides AO353_13565 and AO353_13570 are separated by 149 nucleotides
AO353_13560: AO353_13560 - histidinol phosphatase, at 3,010,466 to 3,011,248
_13560
AO353_13565: AO353_13565 - peptidase, at 3,011,474 to 3,012,856
_13565
AO353_13570: AO353_13570 - TonB-dependent receptor, at 3,013,006 to 3,015,135
_13570
Position (kb)
3011
3012
3013 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3010.480 kb on + strand at 3010.481 kb on - strand at 3010.481 kb on - strand at 3010.481 kb on - strand at 3010.611 kb on + strand, within AO353_13560 at 3010.612 kb on - strand, within AO353_13560 at 3011.357 kb on - strand at 3011.408 kb on + strand at 3011.409 kb on - strand at 3011.440 kb on + strand at 3011.441 kb on - strand at 3011.441 kb on - strand at 3011.441 kb on - strand at 3011.441 kb on - strand at 3011.471 kb on + strand at 3011.471 kb on + strand at 3011.471 kb on + strand at 3011.471 kb on + strand at 3011.472 kb on - strand at 3011.576 kb on + strand at 3011.576 kb on + strand at 3011.577 kb on - strand at 3011.687 kb on + strand, within AO353_13565 at 3011.687 kb on + strand, within AO353_13565 at 3011.687 kb on + strand, within AO353_13565 at 3011.687 kb on + strand, within AO353_13565 at 3011.688 kb on - strand, within AO353_13565 at 3011.688 kb on - strand, within AO353_13565 at 3011.688 kb on - strand, within AO353_13565 at 3011.688 kb on - strand, within AO353_13565 at 3011.688 kb on - strand, within AO353_13565 at 3011.853 kb on + strand, within AO353_13565 at 3012.004 kb on + strand, within AO353_13565 at 3012.201 kb on + strand, within AO353_13565 at 3012.202 kb on - strand, within AO353_13565 at 3012.202 kb on - strand, within AO353_13565 at 3012.202 kb on - strand, within AO353_13565 at 3012.202 kb on - strand, within AO353_13565 at 3012.568 kb on + strand, within AO353_13565 at 3012.612 kb on + strand, within AO353_13565 at 3012.612 kb on + strand, within AO353_13565 at 3012.612 kb on + strand, within AO353_13565 at 3012.613 kb on - strand, within AO353_13565 at 3012.613 kb on - strand, within AO353_13565 at 3012.613 kb on - strand, within AO353_13565 at 3012.714 kb on + strand, within AO353_13565 at 3012.714 kb on + strand, within AO353_13565 at 3012.714 kb on + strand, within AO353_13565 at 3012.714 kb on + strand, within AO353_13565 at 3012.714 kb on + strand, within AO353_13565 at 3012.715 kb on - strand, within AO353_13565 at 3012.715 kb on - strand, within AO353_13565 at 3012.715 kb on - strand, within AO353_13565 at 3012.715 kb on - strand, within AO353_13565 at 3012.747 kb on + strand at 3012.747 kb on + strand at 3012.748 kb on - strand at 3012.748 kb on - strand at 3012.748 kb on - strand at 3012.805 kb on - strand at 3012.805 kb on - strand at 3012.805 kb on - strand at 3012.832 kb on - strand at 3012.942 kb on + strand at 3012.942 kb on + strand at 3012.942 kb on + strand at 3012.942 kb on + strand at 3012.942 kb on + strand at 3012.942 kb on + strand at 3012.942 kb on + strand at 3012.943 kb on - strand at 3012.943 kb on - strand at 3012.943 kb on - strand at 3012.960 kb on + strand at 3012.979 kb on + strand at 3012.980 kb on - strand at 3013.007 kb on + strand at 3013.007 kb on + strand at 3013.007 kb on + strand at 3013.007 kb on + strand at 3013.007 kb on + strand at 3013.008 kb on - strand at 3013.008 kb on - strand at 3013.008 kb on - strand at 3013.121 kb on + strand at 3013.122 kb on - strand at 3013.226 kb on + strand, within AO353_13570 at 3013.227 kb on - strand, within AO353_13570 at 3013.227 kb on - strand, within AO353_13570 at 3013.322 kb on + strand, within AO353_13570 at 3013.322 kb on + strand, within AO353_13570 at 3013.322 kb on + strand, within AO353_13570 at 3013.323 kb on - strand, within AO353_13570 at 3013.323 kb on - strand, within AO353_13570 at 3013.400 kb on + strand, within AO353_13570 at 3013.401 kb on - strand, within AO353_13570 at 3013.442 kb on + strand, within AO353_13570 at 3013.442 kb on + strand, within AO353_13570 at 3013.442 kb on + strand, within AO353_13570 at 3013.442 kb on + strand, within AO353_13570 at 3013.442 kb on + strand, within AO353_13570 at 3013.443 kb on - strand, within AO353_13570 at 3013.443 kb on - strand, within AO353_13570 at 3013.443 kb on - strand, within AO353_13570 at 3013.443 kb on - strand, within AO353_13570 at 3013.443 kb on - strand at 3013.523 kb on + strand, within AO353_13570 at 3013.523 kb on + strand, within AO353_13570 at 3013.538 kb on + strand, within AO353_13570 at 3013.538 kb on + strand, within AO353_13570 at 3013.538 kb on + strand, within AO353_13570 at 3013.538 kb on + strand, within AO353_13570 at 3013.538 kb on + strand, within AO353_13570 at 3013.538 kb on + strand, within AO353_13570 at 3013.538 kb on + strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.539 kb on - strand, within AO353_13570 at 3013.546 kb on + strand, within AO353_13570 at 3013.546 kb on + strand, within AO353_13570 at 3013.547 kb on - strand, within AO353_13570 at 3013.595 kb on + strand, within AO353_13570 at 3013.595 kb on + strand, within AO353_13570 at 3013.596 kb on - strand, within AO353_13570 at 3013.596 kb on - strand, within AO353_13570 at 3013.596 kb on - strand, within AO353_13570 at 3013.596 kb on - strand, within AO353_13570 at 3013.596 kb on - strand, within AO353_13570 at 3013.596 kb on - strand, within AO353_13570 at 3013.697 kb on + strand, within AO353_13570 at 3013.698 kb on - strand, within AO353_13570 at 3013.698 kb on - strand, within AO353_13570 at 3013.733 kb on + strand, within AO353_13570 at 3013.733 kb on + strand, within AO353_13570 at 3013.734 kb on - strand, within AO353_13570 at 3013.769 kb on + strand, within AO353_13570
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 3,010,480 + -0.3 3,010,481 - +1.4 3,010,481 - -0.6 3,010,481 - -2.6 3,010,611 + AO353_13560 0.19 +1.3 3,010,612 - AO353_13560 0.19 +0.0 3,011,357 - -2.6 3,011,408 + -1.0 3,011,409 - +0.3 3,011,440 + +0.8 3,011,441 - +1.0 3,011,441 - -0.4 3,011,441 - +0.0 3,011,441 - +0.4 3,011,471 + -1.0 3,011,471 + +1.0 3,011,471 + -0.1 3,011,471 + -0.1 3,011,472 - +1.2 3,011,576 + -1.0 3,011,576 + +0.1 3,011,577 - -1.5 3,011,687 + AO353_13565 0.15 +2.0 3,011,687 + AO353_13565 0.15 +0.8 3,011,687 + AO353_13565 0.15 +1.0 3,011,687 + AO353_13565 0.15 -0.7 3,011,688 - AO353_13565 0.15 -0.6 3,011,688 - AO353_13565 0.15 +1.0 3,011,688 - AO353_13565 0.15 -0.0 3,011,688 - AO353_13565 0.15 +1.0 3,011,688 - AO353_13565 0.15 -0.8 3,011,853 + AO353_13565 0.27 -0.7 3,012,004 + AO353_13565 0.38 +0.4 3,012,201 + AO353_13565 0.53 +1.0 3,012,202 - AO353_13565 0.53 +2.1 3,012,202 - AO353_13565 0.53 +0.5 3,012,202 - AO353_13565 0.53 +0.4 3,012,202 - AO353_13565 0.53 -0.3 3,012,568 + AO353_13565 0.79 +0.9 3,012,612 + AO353_13565 0.82 +0.1 3,012,612 + AO353_13565 0.82 -1.6 3,012,612 + AO353_13565 0.82 +1.2 3,012,613 - AO353_13565 0.82 -0.2 3,012,613 - AO353_13565 0.82 +1.7 3,012,613 - AO353_13565 0.82 -0.4 3,012,714 + AO353_13565 0.90 -0.4 3,012,714 + AO353_13565 0.90 +0.3 3,012,714 + AO353_13565 0.90 +0.9 3,012,714 + AO353_13565 0.90 +0.9 3,012,714 + AO353_13565 0.90 -1.0 3,012,715 - AO353_13565 0.90 -1.1 3,012,715 - AO353_13565 0.90 -1.6 3,012,715 - AO353_13565 0.90 -0.5 3,012,715 - AO353_13565 0.90 -0.2 3,012,747 + +0.8 3,012,747 + -1.3 3,012,748 - +0.4 3,012,748 - +0.3 3,012,748 - -0.3 3,012,805 - +1.3 3,012,805 - +0.6 3,012,805 - +1.5 3,012,832 - +0.5 3,012,942 + +0.6 3,012,942 + +0.6 3,012,942 + -0.2 3,012,942 + +0.4 3,012,942 + +0.4 3,012,942 + +0.7 3,012,942 + +0.8 3,012,943 - +0.0 3,012,943 - +0.9 3,012,943 - +0.7 3,012,960 + +1.6 3,012,979 + -1.7 3,012,980 - -2.4 3,013,007 + +0.5 3,013,007 + -0.3 3,013,007 + -1.6 3,013,007 + +0.7 3,013,007 + -0.3 3,013,008 - -1.0 3,013,008 - -1.4 3,013,008 - -0.3 3,013,121 + -1.2 3,013,122 - +0.9 3,013,226 + AO353_13570 0.10 +0.3 3,013,227 - AO353_13570 0.10 -1.0 3,013,227 - AO353_13570 0.10 +0.2 3,013,322 + AO353_13570 0.15 +1.2 3,013,322 + AO353_13570 0.15 +1.6 3,013,322 + AO353_13570 0.15 +0.2 3,013,323 - AO353_13570 0.15 +0.6 3,013,323 - AO353_13570 0.15 -2.1 3,013,400 + AO353_13570 0.18 +0.3 3,013,401 - AO353_13570 0.19 -1.4 3,013,442 + AO353_13570 0.20 +2.6 3,013,442 + AO353_13570 0.20 +2.1 3,013,442 + AO353_13570 0.20 +3.2 3,013,442 + AO353_13570 0.20 +0.9 3,013,442 + AO353_13570 0.20 +1.2 3,013,443 - AO353_13570 0.21 -2.2 3,013,443 - AO353_13570 0.21 -0.2 3,013,443 - AO353_13570 0.21 +2.0 3,013,443 - AO353_13570 0.21 -0.6 3,013,443 - +1.6 3,013,523 + AO353_13570 0.24 +1.5 3,013,523 + AO353_13570 0.24 +0.9 3,013,538 + AO353_13570 0.25 +0.9 3,013,538 + AO353_13570 0.25 +1.6 3,013,538 + AO353_13570 0.25 +1.0 3,013,538 + AO353_13570 0.25 -0.2 3,013,538 + AO353_13570 0.25 +0.9 3,013,538 + AO353_13570 0.25 +0.4 3,013,538 + AO353_13570 0.25 +3.9 3,013,539 - AO353_13570 0.25 +1.2 3,013,539 - AO353_13570 0.25 +1.2 3,013,539 - AO353_13570 0.25 -0.4 3,013,539 - AO353_13570 0.25 -1.1 3,013,539 - AO353_13570 0.25 -0.2 3,013,539 - AO353_13570 0.25 -0.3 3,013,539 - AO353_13570 0.25 +1.2 3,013,539 - AO353_13570 0.25 +0.6 3,013,539 - AO353_13570 0.25 +1.3 3,013,539 - AO353_13570 0.25 +0.6 3,013,539 - AO353_13570 0.25 +0.9 3,013,546 + AO353_13570 0.25 +2.6 3,013,546 + AO353_13570 0.25 +2.6 3,013,547 - AO353_13570 0.25 -1.7 3,013,595 + AO353_13570 0.28 +0.2 3,013,595 + AO353_13570 0.28 +1.6 3,013,596 - AO353_13570 0.28 +0.4 3,013,596 - AO353_13570 0.28 +0.7 3,013,596 - AO353_13570 0.28 +1.4 3,013,596 - AO353_13570 0.28 +0.7 3,013,596 - AO353_13570 0.28 +0.9 3,013,596 - AO353_13570 0.28 -0.4 3,013,697 + AO353_13570 0.32 +1.7 3,013,698 - AO353_13570 0.32 +0.6 3,013,698 - AO353_13570 0.32 +1.4 3,013,733 + AO353_13570 0.34 +0.3 3,013,733 + AO353_13570 0.34 +1.0 3,013,734 - AO353_13570 0.34 -0.2 3,013,769 + AO353_13570 0.36 +2.2
Or see this region's nucleotide sequence