Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12115 and AO353_12120 are separated by 151 nucleotides AO353_12120 and AO353_12125 are separated by 1 nucleotides AO353_12125 and AO353_12130 are separated by 56 nucleotides AO353_12130 and AO353_12135 are separated by 230 nucleotides AO353_12135 and AO353_12140 are separated by 76 nucleotides
AO353_12115: AO353_12115 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,662,069 to 2,663,598
_12115
AO353_12120: AO353_12120 - sulfurtransferase, at 2,663,750 to 2,664,163
_12120
AO353_12125: AO353_12125 - glutaredoxin, at 2,664,165 to 2,664,419
_12125
AO353_12130: AO353_12130 - preprotein translocase subunit SecB, at 2,664,476 to 2,664,958
_12130
AO353_12135: AO353_12135 - rRNA methylase, at 2,665,189 to 2,665,644
_12135
AO353_12140: AO353_12140 - hypothetical protein, at 2,665,721 to 2,666,083
_12140
Position (kb)
2664
2665 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2663.565 kb on + strand at 2663.592 kb on + strand at 2663.615 kb on + strand at 2663.616 kb on - strand at 2663.616 kb on - strand at 2663.616 kb on - strand at 2663.616 kb on - strand at 2663.616 kb on - strand at 2663.616 kb on - strand at 2663.621 kb on - strand at 2663.621 kb on - strand at 2663.621 kb on - strand at 2663.652 kb on + strand at 2663.653 kb on - strand at 2663.701 kb on + strand at 2663.701 kb on + strand at 2663.702 kb on - strand at 2663.702 kb on - strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.712 kb on + strand at 2663.713 kb on - strand at 2663.713 kb on - strand at 2663.713 kb on - strand at 2663.714 kb on + strand at 2663.714 kb on + strand at 2663.714 kb on + strand at 2663.729 kb on + strand at 2663.729 kb on + strand at 2663.779 kb on + strand at 2663.779 kb on + strand at 2663.786 kb on + strand at 2663.787 kb on - strand at 2663.812 kb on - strand, within AO353_12120 at 2664.098 kb on - strand, within AO353_12120 at 2664.098 kb on - strand, within AO353_12120 at 2664.165 kb on - strand at 2664.165 kb on - strand at 2664.165 kb on - strand at 2664.165 kb on - strand at 2664.183 kb on + strand at 2664.183 kb on + strand at 2664.184 kb on - strand at 2664.196 kb on - strand, within AO353_12125 at 2664.205 kb on - strand, within AO353_12125 at 2664.222 kb on + strand, within AO353_12125 at 2664.222 kb on + strand, within AO353_12125 at 2664.222 kb on + strand, within AO353_12125 at 2664.222 kb on + strand, within AO353_12125 at 2664.222 kb on + strand, within AO353_12125 at 2664.222 kb on + strand, within AO353_12125 at 2664.223 kb on - strand, within AO353_12125 at 2664.223 kb on - strand, within AO353_12125 at 2664.223 kb on - strand, within AO353_12125 at 2664.223 kb on - strand, within AO353_12125 at 2664.223 kb on - strand, within AO353_12125 at 2664.244 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.314 kb on + strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.315 kb on - strand, within AO353_12125 at 2664.429 kb on + strand at 2664.429 kb on + strand at 2664.429 kb on + strand at 2664.429 kb on + strand at 2664.429 kb on + strand at 2664.445 kb on + strand at 2664.445 kb on + strand at 2664.445 kb on + strand at 2664.446 kb on - strand at 2664.446 kb on - strand at 2664.446 kb on - strand at 2664.446 kb on - strand at 2664.503 kb on - strand at 2664.545 kb on + strand, within AO353_12130 at 2664.545 kb on + strand, within AO353_12130 at 2664.545 kb on + strand, within AO353_12130 at 2664.545 kb on + strand, within AO353_12130 at 2664.545 kb on + strand, within AO353_12130 at 2664.546 kb on - strand, within AO353_12130 at 2664.546 kb on - strand, within AO353_12130 at 2664.742 kb on + strand, within AO353_12130 at 2664.742 kb on + strand, within AO353_12130 at 2664.742 kb on + strand, within AO353_12130 at 2664.743 kb on - strand, within AO353_12130 at 2664.905 kb on + strand, within AO353_12130 at 2664.906 kb on - strand, within AO353_12130 at 2664.906 kb on - strand, within AO353_12130 at 2664.956 kb on + strand at 2664.957 kb on - strand at 2665.008 kb on - strand at 2665.066 kb on + strand at 2665.175 kb on + strand at 2665.175 kb on + strand at 2665.190 kb on + strand at 2665.191 kb on - strand at 2665.191 kb on - strand at 2665.201 kb on + strand at 2665.201 kb on + strand at 2665.201 kb on + strand at 2665.201 kb on + strand at 2665.202 kb on - strand at 2665.202 kb on - strand at 2665.220 kb on + strand at 2665.484 kb on + strand, within AO353_12135 at 2665.484 kb on + strand, within AO353_12135 at 2665.484 kb on + strand, within AO353_12135 at 2665.484 kb on + strand, within AO353_12135 at 2665.484 kb on + strand, within AO353_12135 at 2665.485 kb on - strand, within AO353_12135 at 2665.485 kb on - strand, within AO353_12135 at 2665.485 kb on - strand, within AO353_12135 at 2665.493 kb on + strand, within AO353_12135 at 2665.493 kb on + strand, within AO353_12135 at 2665.494 kb on - strand, within AO353_12135 at 2665.590 kb on + strand, within AO353_12135 at 2665.660 kb on + strand at 2665.660 kb on + strand at 2665.660 kb on + strand at 2665.660 kb on + strand at 2665.660 kb on + strand at 2665.660 kb on + strand at 2665.661 kb on - strand at 2665.661 kb on - strand at 2665.661 kb on - strand at 2665.661 kb on - strand at 2665.678 kb on + strand at 2665.678 kb on + strand at 2665.678 kb on + strand at 2665.678 kb on + strand at 2665.678 kb on + strand at 2665.678 kb on + strand at 2665.679 kb on - strand at 2665.707 kb on + strand at 2665.707 kb on + strand at 2665.707 kb on + strand at 2665.707 kb on + strand at 2665.707 kb on + strand at 2665.707 kb on + strand at 2665.707 kb on + strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.708 kb on - strand at 2665.789 kb on + strand, within AO353_12140 at 2665.789 kb on + strand, within AO353_12140 at 2665.790 kb on - strand, within AO353_12140 at 2665.790 kb on - strand, within AO353_12140 at 2665.790 kb on - strand, within AO353_12140 at 2665.790 kb on - strand, within AO353_12140 at 2665.790 kb on - strand, within AO353_12140 at 2665.790 kb on - strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.794 kb on + strand, within AO353_12140 at 2665.795 kb on - strand at 2665.795 kb on - strand, within AO353_12140 at 2665.795 kb on - strand, within AO353_12140 at 2665.795 kb on - strand, within AO353_12140 at 2665.795 kb on - strand, within AO353_12140 at 2665.879 kb on + strand, within AO353_12140 at 2665.879 kb on + strand, within AO353_12140
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 2,663,565 + -1.2 2,663,592 + +0.3 2,663,615 + -0.2 2,663,616 - -0.2 2,663,616 - -0.2 2,663,616 - -2.1 2,663,616 - -0.8 2,663,616 - -0.4 2,663,616 - -0.1 2,663,621 - -0.9 2,663,621 - -0.8 2,663,621 - -0.1 2,663,652 + -1.8 2,663,653 - -0.1 2,663,701 + +0.4 2,663,701 + -1.1 2,663,702 - -0.3 2,663,702 - +0.1 2,663,712 + -0.4 2,663,712 + -2.0 2,663,712 + -0.3 2,663,712 + +0.6 2,663,712 + +0.7 2,663,712 + +0.1 2,663,712 + +0.7 2,663,712 + -0.3 2,663,712 + +0.1 2,663,712 + +0.4 2,663,713 - -0.5 2,663,713 - +0.7 2,663,713 - +1.6 2,663,714 + +1.4 2,663,714 + -1.3 2,663,714 + -0.8 2,663,729 + -1.3 2,663,729 + +1.2 2,663,779 + +1.4 2,663,779 + -0.3 2,663,786 + -1.5 2,663,787 - +0.6 2,663,812 - AO353_12120 0.15 -0.1 2,664,098 - AO353_12120 0.84 -1.1 2,664,098 - AO353_12120 0.84 +0.2 2,664,165 - -1.4 2,664,165 - +0.4 2,664,165 - +1.0 2,664,165 - -0.6 2,664,183 + +0.4 2,664,183 + -0.5 2,664,184 - +1.7 2,664,196 - AO353_12125 0.12 -0.2 2,664,205 - AO353_12125 0.16 -0.5 2,664,222 + AO353_12125 0.22 -0.1 2,664,222 + AO353_12125 0.22 +0.6 2,664,222 + AO353_12125 0.22 +0.7 2,664,222 + AO353_12125 0.22 +0.4 2,664,222 + AO353_12125 0.22 -2.4 2,664,222 + AO353_12125 0.22 +0.5 2,664,223 - AO353_12125 0.23 -0.7 2,664,223 - AO353_12125 0.23 -0.3 2,664,223 - AO353_12125 0.23 +2.7 2,664,223 - AO353_12125 0.23 +0.4 2,664,223 - AO353_12125 0.23 -0.6 2,664,244 + AO353_12125 0.31 +0.9 2,664,314 + AO353_12125 0.58 +1.7 2,664,314 + AO353_12125 0.58 +1.2 2,664,314 + AO353_12125 0.58 +1.7 2,664,314 + AO353_12125 0.58 +0.7 2,664,314 + AO353_12125 0.58 +1.9 2,664,314 + AO353_12125 0.58 -0.2 2,664,314 + AO353_12125 0.58 +0.2 2,664,314 + AO353_12125 0.58 +1.0 2,664,314 + AO353_12125 0.58 -0.3 2,664,315 - AO353_12125 0.59 -1.9 2,664,315 - AO353_12125 0.59 +0.0 2,664,315 - AO353_12125 0.59 +1.2 2,664,315 - AO353_12125 0.59 -0.1 2,664,315 - AO353_12125 0.59 -1.6 2,664,315 - AO353_12125 0.59 -0.6 2,664,315 - AO353_12125 0.59 -0.6 2,664,315 - AO353_12125 0.59 -0.6 2,664,315 - AO353_12125 0.59 +0.2 2,664,315 - AO353_12125 0.59 +0.3 2,664,315 - AO353_12125 0.59 +0.5 2,664,315 - AO353_12125 0.59 -1.3 2,664,315 - AO353_12125 0.59 -0.2 2,664,429 + +1.3 2,664,429 + +0.2 2,664,429 + -0.3 2,664,429 + +1.6 2,664,429 + -0.1 2,664,445 + -0.6 2,664,445 + +0.7 2,664,445 + +1.4 2,664,446 - +1.0 2,664,446 - -1.1 2,664,446 - -1.2 2,664,446 - +0.7 2,664,503 - -1.5 2,664,545 + AO353_12130 0.14 -0.7 2,664,545 + AO353_12130 0.14 +0.2 2,664,545 + AO353_12130 0.14 -0.3 2,664,545 + AO353_12130 0.14 -0.6 2,664,545 + AO353_12130 0.14 -1.3 2,664,546 - AO353_12130 0.14 -1.2 2,664,546 - AO353_12130 0.14 -0.2 2,664,742 + AO353_12130 0.55 +0.6 2,664,742 + AO353_12130 0.55 -0.9 2,664,742 + AO353_12130 0.55 -1.4 2,664,743 - AO353_12130 0.55 -0.4 2,664,905 + AO353_12130 0.89 +0.7 2,664,906 - AO353_12130 0.89 -0.6 2,664,906 - AO353_12130 0.89 -1.5 2,664,956 + -2.6 2,664,957 - -0.1 2,665,008 - -1.9 2,665,066 + +0.2 2,665,175 + -0.5 2,665,175 + -0.3 2,665,190 + -0.7 2,665,191 - -1.0 2,665,191 - -0.0 2,665,201 + -1.5 2,665,201 + +1.0 2,665,201 + +0.3 2,665,201 + -0.2 2,665,202 - -1.2 2,665,202 - +0.5 2,665,220 + +0.7 2,665,484 + AO353_12135 0.65 +1.2 2,665,484 + AO353_12135 0.65 -0.4 2,665,484 + AO353_12135 0.65 +0.9 2,665,484 + AO353_12135 0.65 +1.0 2,665,484 + AO353_12135 0.65 +0.6 2,665,485 - AO353_12135 0.65 +0.7 2,665,485 - AO353_12135 0.65 -0.1 2,665,485 - AO353_12135 0.65 -0.6 2,665,493 + AO353_12135 0.67 +0.4 2,665,493 + AO353_12135 0.67 -0.2 2,665,494 - AO353_12135 0.67 +1.4 2,665,590 + AO353_12135 0.88 +0.7 2,665,660 + +1.4 2,665,660 + -0.2 2,665,660 + -0.7 2,665,660 + +2.0 2,665,660 + +0.7 2,665,660 + -1.3 2,665,661 - -0.2 2,665,661 - -0.6 2,665,661 - -1.1 2,665,661 - +0.2 2,665,678 + -0.3 2,665,678 + +0.7 2,665,678 + -0.3 2,665,678 + +0.2 2,665,678 + +1.3 2,665,678 + +1.3 2,665,679 - -0.1 2,665,707 + +0.7 2,665,707 + -0.3 2,665,707 + +0.4 2,665,707 + +0.9 2,665,707 + -0.7 2,665,707 + +0.1 2,665,707 + -0.6 2,665,708 - +0.1 2,665,708 - +0.7 2,665,708 - -0.5 2,665,708 - -1.4 2,665,708 - +0.2 2,665,708 - -0.8 2,665,708 - -0.9 2,665,708 - -0.5 2,665,708 - +1.1 2,665,708 - -0.5 2,665,708 - -0.5 2,665,708 - +1.6 2,665,708 - +0.8 2,665,708 - +0.6 2,665,789 + AO353_12140 0.19 +0.6 2,665,789 + AO353_12140 0.19 +0.6 2,665,790 - AO353_12140 0.19 -2.0 2,665,790 - AO353_12140 0.19 -0.2 2,665,790 - AO353_12140 0.19 +2.0 2,665,790 - AO353_12140 0.19 +1.0 2,665,790 - AO353_12140 0.19 -1.5 2,665,790 - AO353_12140 0.19 -1.0 2,665,794 + AO353_12140 0.20 +0.6 2,665,794 + AO353_12140 0.20 -0.4 2,665,794 + AO353_12140 0.20 +0.3 2,665,794 + AO353_12140 0.20 -0.1 2,665,794 + AO353_12140 0.20 -2.1 2,665,794 + AO353_12140 0.20 -0.4 2,665,794 + AO353_12140 0.20 +0.4 2,665,794 + AO353_12140 0.20 -0.3 2,665,795 - +1.2 2,665,795 - AO353_12140 0.20 -0.2 2,665,795 - AO353_12140 0.20 -0.2 2,665,795 - AO353_12140 0.20 -1.0 2,665,795 - AO353_12140 0.20 +1.1 2,665,879 + AO353_12140 0.44 +1.1 2,665,879 + AO353_12140 0.44 -2.1
Or see this region's nucleotide sequence