Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_11845 and AO353_11850 overlap by 4 nucleotides AO353_11850 and AO353_11855 are separated by 150 nucleotides AO353_11855 and AO353_11860 are separated by 50 nucleotides
AO353_11845: AO353_11845 - ADP-ribose diphosphatase, at 2,613,754 to 2,614,320
_11845
AO353_11850: AO353_11850 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 2,614,317 to 2,615,153
_11850
AO353_11855: AO353_11855 - thioesterase, at 2,615,304 to 2,615,759
_11855
AO353_11860: AO353_11860 - Fis family transcriptional regulator, at 2,615,810 to 2,617,213
_11860
Position (kb)
2615
2616 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2614.681 kb on + strand, within AO353_11850 at 2614.681 kb on + strand, within AO353_11850 at 2614.682 kb on - strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.711 kb on - strand, within AO353_11850 at 2614.786 kb on + strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2615.059 kb on - strand, within AO353_11850 at 2615.210 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.230 kb on - strand at 2615.257 kb on - strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.593 kb on + strand, within AO353_11855 at 2615.593 kb on + strand, within AO353_11855 at 2615.593 kb on + strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.658 kb on + strand, within AO353_11855 at 2615.658 kb on + strand, within AO353_11855 at 2615.658 kb on + strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.682 kb on + strand, within AO353_11855 at 2615.683 kb on - strand, within AO353_11855 at 2615.683 kb on - strand, within AO353_11855 at 2615.696 kb on + strand, within AO353_11855 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.288 kb on + strand, within AO353_11860 at 2616.289 kb on - strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.533 kb on - strand, within AO353_11860
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 2,614,681 + AO353_11850 0.43 +0.6 2,614,681 + AO353_11850 0.43 +0.4 2,614,682 - AO353_11850 0.44 +1.1 2,614,710 + AO353_11850 0.47 +1.1 2,614,710 + AO353_11850 0.47 -0.7 2,614,710 + AO353_11850 0.47 +0.3 2,614,710 + AO353_11850 0.47 +0.3 2,614,711 - AO353_11850 0.47 +0.5 2,614,786 + AO353_11850 0.56 -0.2 2,614,787 - AO353_11850 0.56 +2.5 2,614,787 - AO353_11850 0.56 +0.9 2,614,787 - AO353_11850 0.56 +0.8 2,614,787 - AO353_11850 0.56 +1.2 2,614,787 - AO353_11850 0.56 +1.0 2,614,787 - AO353_11850 0.56 -0.1 2,615,059 - AO353_11850 0.89 +0.2 2,615,210 + -0.1 2,615,213 + +1.4 2,615,213 + -0.4 2,615,213 + -1.6 2,615,213 + +0.2 2,615,213 + -0.4 2,615,213 + -0.0 2,615,230 - +0.4 2,615,257 - +1.0 2,615,320 + -0.4 2,615,320 + -0.1 2,615,320 + -0.7 2,615,320 + +0.3 2,615,320 + +1.2 2,615,320 + +0.2 2,615,320 + -1.4 2,615,320 + -0.9 2,615,320 + -0.9 2,615,321 - +0.7 2,615,321 - -0.4 2,615,321 - +0.6 2,615,321 - +0.9 2,615,321 - +0.4 2,615,321 - -1.2 2,615,321 - -0.3 2,615,321 - -0.3 2,615,321 - +0.4 2,615,321 - -0.9 2,615,321 - -2.0 2,615,321 - +1.6 2,615,321 - +1.1 2,615,321 - -1.3 2,615,321 - +0.7 2,615,375 + AO353_11855 0.16 -0.2 2,615,375 + AO353_11855 0.16 -0.8 2,615,375 + AO353_11855 0.16 -0.2 2,615,375 + AO353_11855 0.16 +0.7 2,615,375 + AO353_11855 0.16 +0.7 2,615,375 + AO353_11855 0.16 +0.4 2,615,375 + AO353_11855 0.16 -0.0 2,615,375 + AO353_11855 0.16 +2.8 2,615,375 + AO353_11855 0.16 +0.5 2,615,375 + AO353_11855 0.16 +0.3 2,615,375 + AO353_11855 0.16 -0.7 2,615,375 + AO353_11855 0.16 +1.7 2,615,375 + AO353_11855 0.16 +0.0 2,615,375 + AO353_11855 0.16 -0.1 2,615,375 + AO353_11855 0.16 +0.2 2,615,376 - AO353_11855 0.16 +1.3 2,615,376 - AO353_11855 0.16 +0.3 2,615,376 - AO353_11855 0.16 +1.2 2,615,376 - AO353_11855 0.16 -0.3 2,615,376 - AO353_11855 0.16 +1.5 2,615,376 - AO353_11855 0.16 -0.2 2,615,376 - AO353_11855 0.16 +0.4 2,615,376 - AO353_11855 0.16 -2.2 2,615,376 - AO353_11855 0.16 +0.1 2,615,376 - AO353_11855 0.16 -0.3 2,615,376 - AO353_11855 0.16 -1.0 2,615,376 - AO353_11855 0.16 +1.3 2,615,376 - AO353_11855 0.16 -0.0 2,615,410 + AO353_11855 0.23 -0.0 2,615,410 + AO353_11855 0.23 +0.3 2,615,410 + AO353_11855 0.23 +2.1 2,615,410 + AO353_11855 0.23 -0.4 2,615,410 + AO353_11855 0.23 -0.9 2,615,410 + AO353_11855 0.23 -0.7 2,615,410 + AO353_11855 0.23 +1.6 2,615,411 - AO353_11855 0.23 +0.3 2,615,411 - AO353_11855 0.23 +2.0 2,615,411 - AO353_11855 0.23 -0.4 2,615,411 - AO353_11855 0.23 +0.3 2,615,411 - AO353_11855 0.23 +1.1 2,615,411 - AO353_11855 0.23 -0.7 2,615,411 - AO353_11855 0.23 -0.6 2,615,411 - AO353_11855 0.23 +0.3 2,615,411 - AO353_11855 0.23 -0.0 2,615,593 + AO353_11855 0.63 +2.4 2,615,593 + AO353_11855 0.63 +0.5 2,615,593 + AO353_11855 0.63 -0.1 2,615,594 - AO353_11855 0.64 +0.9 2,615,594 - AO353_11855 0.64 +1.7 2,615,594 - AO353_11855 0.64 +0.8 2,615,594 - AO353_11855 0.64 +0.4 2,615,658 + AO353_11855 0.78 +1.0 2,615,658 + AO353_11855 0.78 -0.9 2,615,658 + AO353_11855 0.78 +0.7 2,615,659 - AO353_11855 0.78 +1.0 2,615,659 - AO353_11855 0.78 +0.2 2,615,659 - AO353_11855 0.78 -0.7 2,615,659 - AO353_11855 0.78 +0.2 2,615,659 - AO353_11855 0.78 +0.5 2,615,659 - AO353_11855 0.78 -1.2 2,615,682 + AO353_11855 0.83 -2.2 2,615,683 - AO353_11855 0.83 -0.3 2,615,683 - AO353_11855 0.83 -0.3 2,615,696 + AO353_11855 0.86 +0.1 2,616,019 + AO353_11860 0.15 +0.7 2,616,019 + AO353_11860 0.15 +0.5 2,616,019 + AO353_11860 0.15 -0.2 2,616,019 + AO353_11860 0.15 +0.2 2,616,019 + AO353_11860 0.15 +0.1 2,616,019 + AO353_11860 0.15 -0.4 2,616,020 - AO353_11860 0.15 +0.1 2,616,020 - AO353_11860 0.15 -0.7 2,616,020 - AO353_11860 0.15 -1.0 2,616,020 - AO353_11860 0.15 -1.5 2,616,020 - AO353_11860 0.15 -0.4 2,616,020 - AO353_11860 0.15 -0.8 2,616,020 - AO353_11860 0.15 -0.9 2,616,288 + AO353_11860 0.34 -0.6 2,616,289 - AO353_11860 0.34 +1.1 2,616,291 + AO353_11860 0.34 -1.4 2,616,291 + AO353_11860 0.34 +0.2 2,616,291 + AO353_11860 0.34 -1.0 2,616,291 + AO353_11860 0.34 +0.7 2,616,291 + AO353_11860 0.34 +0.9 2,616,291 + AO353_11860 0.34 -0.4 2,616,291 + AO353_11860 0.34 -0.2 2,616,291 + AO353_11860 0.34 -0.9 2,616,291 + AO353_11860 0.34 +0.5 2,616,291 + AO353_11860 0.34 +0.9 2,616,292 - AO353_11860 0.34 +0.3 2,616,292 - AO353_11860 0.34 +1.7 2,616,292 - AO353_11860 0.34 +0.6 2,616,292 - AO353_11860 0.34 +0.4 2,616,292 - AO353_11860 0.34 -1.0 2,616,533 - AO353_11860 0.51 +0.5
Or see this region's nucleotide sequence