Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10630 and AO353_10635 overlap by 4 nucleotides AO353_10635 and AO353_10640 are separated by 66 nucleotides AO353_10640 and AO353_10645 are separated by 170 nucleotides
AO353_10630: AO353_10630 - 16S rRNA methyltransferase, at 2,330,597 to 2,331,907
_10630
AO353_10635: AO353_10635 - methionyl-tRNA formyltransferase, at 2,331,904 to 2,332,863
_10635
AO353_10640: AO353_10640 - peptide deformylase, at 2,332,930 to 2,333,436
_10640
AO353_10645: AO353_10645 - peptidoglycan-binding protein, at 2,333,607 to 2,334,632
_10645
Position (kb)
2331
2332
2333 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.663 kb on + strand, within AO353_10630 at 2331.862 kb on + strand at 2331.928 kb on + strand at 2331.928 kb on + strand at 2331.928 kb on + strand at 2331.929 kb on - strand at 2331.929 kb on - strand at 2331.929 kb on - strand at 2331.929 kb on - strand at 2333.443 kb on - strand at 2333.443 kb on - strand at 2333.443 kb on - strand at 2333.443 kb on - strand at 2333.443 kb on - strand at 2333.463 kb on - strand at 2333.463 kb on - strand at 2333.520 kb on - strand at 2333.520 kb on - strand at 2333.520 kb on - strand at 2333.520 kb on - strand at 2333.520 kb on - strand at 2333.520 kb on - strand at 2333.520 kb on - strand at 2333.520 kb on - strand at 2333.538 kb on - strand at 2333.538 kb on - strand at 2333.538 kb on - strand at 2333.538 kb on - strand at 2333.538 kb on - strand at 2333.575 kb on - strand at 2333.575 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.589 kb on - strand at 2333.592 kb on - strand at 2333.592 kb on - strand at 2333.592 kb on - strand at 2333.592 kb on - strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.697 kb on + strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.698 kb on - strand at 2333.742 kb on + strand, within AO353_10645 at 2333.742 kb on + strand, within AO353_10645 at 2333.742 kb on + strand, within AO353_10645 at 2333.742 kb on + strand, within AO353_10645 at 2333.742 kb on + strand, within AO353_10645 at 2333.742 kb on + strand, within AO353_10645 at 2333.743 kb on - strand, within AO353_10645 at 2333.743 kb on - strand, within AO353_10645 at 2333.743 kb on - strand, within AO353_10645 at 2333.814 kb on + strand, within AO353_10645 at 2333.814 kb on + strand, within AO353_10645 at 2333.814 kb on + strand, within AO353_10645 at 2333.815 kb on - strand, within AO353_10645 at 2333.815 kb on - strand, within AO353_10645 at 2333.815 kb on - strand, within AO353_10645 at 2333.815 kb on - strand, within AO353_10645 at 2333.815 kb on - strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.841 kb on + strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645 at 2333.842 kb on - strand, within AO353_10645
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 2,331,354 + AO353_10630 0.58 +0.8 2,331,354 + AO353_10630 0.58 +0.8 2,331,354 + AO353_10630 0.58 -0.2 2,331,354 + AO353_10630 0.58 +1.1 2,331,354 + AO353_10630 0.58 +0.5 2,331,651 + AO353_10630 0.80 +1.0 2,331,651 + AO353_10630 0.80 -0.6 2,331,651 + AO353_10630 0.80 -0.0 2,331,651 + AO353_10630 0.80 -0.6 2,331,651 + AO353_10630 0.80 -0.2 2,331,651 + AO353_10630 0.80 +0.1 2,331,651 + AO353_10630 0.80 +1.5 2,331,651 + AO353_10630 0.80 +0.1 2,331,651 + AO353_10630 0.80 +1.3 2,331,651 + AO353_10630 0.80 +1.0 2,331,652 - AO353_10630 0.80 -1.8 2,331,652 - AO353_10630 0.80 +1.3 2,331,652 - AO353_10630 0.80 -0.1 2,331,652 - AO353_10630 0.80 +0.1 2,331,652 - AO353_10630 0.80 +1.5 2,331,652 - AO353_10630 0.80 -1.2 2,331,663 + AO353_10630 0.81 +0.4 2,331,862 + -0.5 2,331,928 + -2.1 2,331,928 + -0.9 2,331,928 + +0.8 2,331,929 - -2.6 2,331,929 - +0.3 2,331,929 - +0.9 2,331,929 - +0.9 2,333,443 - -0.8 2,333,443 - -1.2 2,333,443 - +0.4 2,333,443 - -0.8 2,333,443 - -0.0 2,333,463 - -0.2 2,333,463 - -0.2 2,333,520 - +2.6 2,333,520 - +0.7 2,333,520 - +0.3 2,333,520 - -1.2 2,333,520 - -0.5 2,333,520 - -0.6 2,333,520 - -0.3 2,333,520 - +1.3 2,333,538 - -0.2 2,333,538 - -1.6 2,333,538 - +0.4 2,333,538 - +0.6 2,333,538 - -1.2 2,333,575 - -0.8 2,333,575 - +0.0 2,333,589 - -1.4 2,333,589 - -0.3 2,333,589 - +0.1 2,333,589 - -1.3 2,333,589 - +0.8 2,333,589 - -0.9 2,333,589 - -0.0 2,333,589 - -0.9 2,333,589 - +0.7 2,333,589 - -2.3 2,333,589 - +1.4 2,333,589 - -0.1 2,333,589 - -0.6 2,333,589 - +0.7 2,333,589 - -0.1 2,333,589 - -0.8 2,333,589 - -1.4 2,333,589 - -0.4 2,333,592 - -0.9 2,333,592 - -1.8 2,333,592 - +1.1 2,333,592 - -0.4 2,333,697 + +1.0 2,333,697 + +0.7 2,333,697 + +1.4 2,333,697 + +1.0 2,333,697 + -0.1 2,333,697 + -1.0 2,333,697 + -0.4 2,333,697 + +0.1 2,333,697 + +0.3 2,333,697 + +0.3 2,333,697 + +2.9 2,333,698 - +0.3 2,333,698 - +0.3 2,333,698 - +1.3 2,333,698 - +0.1 2,333,698 - -0.8 2,333,698 - -0.3 2,333,698 - +0.7 2,333,698 - +2.6 2,333,698 - -1.1 2,333,698 - +0.1 2,333,698 - +0.9 2,333,698 - -0.9 2,333,698 - -0.9 2,333,698 - +0.2 2,333,698 - -0.7 2,333,698 - +1.0 2,333,698 - -1.3 2,333,698 - -1.1 2,333,698 - +0.9 2,333,698 - -2.0 2,333,698 - -0.9 2,333,698 - +0.2 2,333,742 + AO353_10645 0.13 +1.1 2,333,742 + AO353_10645 0.13 +0.6 2,333,742 + AO353_10645 0.13 +0.1 2,333,742 + AO353_10645 0.13 +0.3 2,333,742 + AO353_10645 0.13 -0.0 2,333,742 + AO353_10645 0.13 +1.1 2,333,743 - AO353_10645 0.13 +0.2 2,333,743 - AO353_10645 0.13 -1.4 2,333,743 - AO353_10645 0.13 +0.3 2,333,814 + AO353_10645 0.20 +0.2 2,333,814 + AO353_10645 0.20 +0.6 2,333,814 + AO353_10645 0.20 -1.2 2,333,815 - AO353_10645 0.20 -0.2 2,333,815 - AO353_10645 0.20 +0.4 2,333,815 - AO353_10645 0.20 -0.0 2,333,815 - AO353_10645 0.20 -0.1 2,333,815 - AO353_10645 0.20 -0.3 2,333,841 + AO353_10645 0.23 +0.1 2,333,841 + AO353_10645 0.23 -2.0 2,333,841 + AO353_10645 0.23 +0.3 2,333,841 + AO353_10645 0.23 -0.2 2,333,841 + AO353_10645 0.23 +1.4 2,333,841 + AO353_10645 0.23 -0.8 2,333,841 + AO353_10645 0.23 -0.8 2,333,841 + AO353_10645 0.23 +2.2 2,333,841 + AO353_10645 0.23 +0.1 2,333,841 + AO353_10645 0.23 +0.3 2,333,841 + AO353_10645 0.23 +0.3 2,333,841 + AO353_10645 0.23 -0.1 2,333,842 - AO353_10645 0.23 -0.6 2,333,842 - AO353_10645 0.23 -0.4 2,333,842 - AO353_10645 0.23 +0.1 2,333,842 - AO353_10645 0.23 +1.8 2,333,842 - AO353_10645 0.23 +0.4 2,333,842 - AO353_10645 0.23 +0.6 2,333,842 - AO353_10645 0.23 +0.4 2,333,842 - AO353_10645 0.23 +1.0 2,333,842 - AO353_10645 0.23 -0.1 2,333,842 - AO353_10645 0.23 -0.6 2,333,842 - AO353_10645 0.23 -0.7 2,333,842 - AO353_10645 0.23 -0.0
Or see this region's nucleotide sequence