Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09880 and AO353_09885 are separated by 180 nucleotides AO353_09885 and AO353_09890 are separated by 74 nucleotides
AO353_09880: AO353_09880 - chemotaxis protein CheY, at 2,156,599 to 2,157,549
_09880
AO353_09885: AO353_09885 - transcriptional regulator PhoU, at 2,157,730 to 2,158,491
_09885
AO353_09890: AO353_09890 - phosphate ABC transporter ATP-binding protein, at 2,158,566 to 2,159,399
_09890
Position (kb)
2157
2158
2159 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2156.753 kb on + strand, within AO353_09880 at 2156.753 kb on + strand, within AO353_09880 at 2156.753 kb on + strand, within AO353_09880 at 2156.898 kb on + strand, within AO353_09880 at 2156.898 kb on + strand, within AO353_09880 at 2156.899 kb on - strand, within AO353_09880 at 2156.899 kb on - strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2157.236 kb on + strand, within AO353_09880 at 2157.236 kb on + strand, within AO353_09880 at 2157.237 kb on - strand, within AO353_09880 at 2157.237 kb on - strand, within AO353_09880 at 2157.237 kb on - strand, within AO353_09880 at 2157.237 kb on - strand, within AO353_09880 at 2157.295 kb on - strand, within AO353_09880 at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.473 kb on + strand at 2157.474 kb on - strand at 2157.474 kb on - strand at 2157.474 kb on - strand at 2157.474 kb on - strand at 2157.474 kb on - strand at 2157.474 kb on - strand at 2157.507 kb on + strand at 2157.508 kb on - strand at 2157.560 kb on + strand at 2157.561 kb on - strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.562 kb on + strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.563 kb on - strand at 2157.580 kb on + strand at 2157.580 kb on + strand at 2157.580 kb on + strand at 2157.581 kb on - strand at 2157.717 kb on + strand at 2157.717 kb on + strand at 2157.717 kb on + strand at 2157.717 kb on + strand at 2157.717 kb on + strand at 2157.717 kb on + strand at 2157.717 kb on + strand at 2157.718 kb on - strand at 2157.718 kb on - strand at 2157.718 kb on - strand at 2157.718 kb on - strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.731 kb on + strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.732 kb on - strand at 2157.735 kb on + strand at 2157.735 kb on + strand at 2157.735 kb on + strand at 2157.735 kb on + strand at 2157.736 kb on - strand at 2157.736 kb on - strand at 2157.736 kb on - strand at 2157.736 kb on - strand at 2157.736 kb on - strand at 2157.736 kb on - strand at 2157.736 kb on - strand at 2157.759 kb on + strand at 2157.842 kb on + strand, within AO353_09885 at 2157.842 kb on + strand, within AO353_09885 at 2157.842 kb on + strand, within AO353_09885 at 2157.842 kb on + strand, within AO353_09885 at 2157.843 kb on - strand, within AO353_09885 at 2157.843 kb on - strand at 2157.953 kb on + strand, within AO353_09885 at 2157.983 kb on + strand, within AO353_09885 at 2158.567 kb on + strand at 2158.567 kb on + strand at 2158.567 kb on + strand at 2158.567 kb on + strand at 2158.568 kb on - strand at 2158.568 kb on - strand at 2158.568 kb on - strand at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.663 kb on + strand, within AO353_09890 at 2158.664 kb on - strand, within AO353_09890 at 2158.664 kb on - strand, within AO353_09890 at 2158.664 kb on - strand, within AO353_09890 at 2158.664 kb on - strand, within AO353_09890 at 2158.751 kb on - strand, within AO353_09890 at 2158.841 kb on + strand, within AO353_09890 at 2158.841 kb on + strand, within AO353_09890 at 2158.842 kb on - strand, within AO353_09890 at 2158.842 kb on - strand, within AO353_09890 at 2159.003 kb on - strand, within AO353_09890 at 2159.017 kb on + strand, within AO353_09890 at 2159.101 kb on + strand, within AO353_09890 at 2159.281 kb on + strand, within AO353_09890 at 2159.281 kb on + strand, within AO353_09890 at 2159.417 kb on - strand at 2159.457 kb on + strand at 2159.471 kb on + strand at 2159.471 kb on + strand at 2159.471 kb on + strand at 2159.472 kb on - strand at 2159.472 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 2,156,753 + AO353_09880 0.16 +0.1 2,156,753 + AO353_09880 0.16 -1.5 2,156,753 + AO353_09880 0.16 +0.0 2,156,898 + AO353_09880 0.31 +0.0 2,156,898 + AO353_09880 0.31 -1.3 2,156,899 - AO353_09880 0.32 -1.3 2,156,899 - AO353_09880 0.32 +0.3 2,156,914 + AO353_09880 0.33 -0.9 2,156,914 + AO353_09880 0.33 +1.2 2,156,914 + AO353_09880 0.33 -0.4 2,156,914 + AO353_09880 0.33 +1.1 2,156,914 + AO353_09880 0.33 -0.7 2,156,914 + AO353_09880 0.33 -0.8 2,156,914 + AO353_09880 0.33 +0.3 2,156,914 + AO353_09880 0.33 -0.8 2,156,914 + AO353_09880 0.33 -0.9 2,156,914 + AO353_09880 0.33 -0.7 2,156,914 + AO353_09880 0.33 +0.2 2,156,915 - AO353_09880 0.33 -0.7 2,156,915 - AO353_09880 0.33 +1.0 2,156,915 - AO353_09880 0.33 -0.2 2,156,915 - AO353_09880 0.33 -1.2 2,156,915 - AO353_09880 0.33 -1.2 2,157,236 + AO353_09880 0.67 -0.4 2,157,236 + AO353_09880 0.67 +0.5 2,157,237 - AO353_09880 0.67 +1.1 2,157,237 - AO353_09880 0.67 -1.4 2,157,237 - AO353_09880 0.67 -0.0 2,157,237 - AO353_09880 0.67 +0.3 2,157,295 - AO353_09880 0.73 +0.3 2,157,473 + +0.5 2,157,473 + -0.7 2,157,473 + +0.2 2,157,473 + -0.5 2,157,473 + +1.5 2,157,473 + +0.1 2,157,473 + +1.0 2,157,473 + +1.5 2,157,473 + +0.5 2,157,473 + -2.0 2,157,473 + -1.9 2,157,474 - +0.1 2,157,474 - +1.9 2,157,474 - +0.8 2,157,474 - -1.5 2,157,474 - -0.8 2,157,474 - -0.1 2,157,507 + -0.3 2,157,508 - -0.7 2,157,560 + -0.1 2,157,561 - -0.7 2,157,562 + -1.4 2,157,562 + +1.4 2,157,562 + +0.7 2,157,562 + +0.2 2,157,562 + +0.3 2,157,562 + -1.0 2,157,562 + +0.2 2,157,562 + +1.1 2,157,562 + -0.9 2,157,562 + -3.2 2,157,562 + -1.4 2,157,562 + +1.7 2,157,562 + -0.9 2,157,562 + +0.7 2,157,563 - -1.1 2,157,563 - -0.4 2,157,563 - +1.3 2,157,563 - +0.6 2,157,563 - -0.9 2,157,563 - +0.9 2,157,563 - -0.4 2,157,563 - +1.0 2,157,563 - -0.1 2,157,580 + +0.1 2,157,580 + -1.4 2,157,580 + -0.8 2,157,581 - +1.0 2,157,717 + -1.7 2,157,717 + -0.1 2,157,717 + -1.4 2,157,717 + +0.3 2,157,717 + +0.1 2,157,717 + +1.0 2,157,717 + +0.1 2,157,718 - -0.4 2,157,718 - +0.2 2,157,718 - +0.3 2,157,718 - +0.2 2,157,731 + +2.2 2,157,731 + +0.4 2,157,731 + -0.6 2,157,731 + -1.7 2,157,731 + -1.5 2,157,731 + +0.6 2,157,731 + -0.3 2,157,731 + +0.2 2,157,731 + -1.0 2,157,731 + -1.4 2,157,731 + -0.3 2,157,731 + -1.4 2,157,731 + -0.7 2,157,731 + -0.5 2,157,731 + -0.6 2,157,731 + -1.3 2,157,732 - +1.2 2,157,732 - +1.5 2,157,732 - -0.1 2,157,732 - -0.1 2,157,732 - +1.0 2,157,732 - -0.1 2,157,732 - +0.4 2,157,732 - +1.3 2,157,732 - +0.3 2,157,732 - +1.4 2,157,732 - +0.2 2,157,732 - -0.2 2,157,732 - -1.3 2,157,732 - -0.2 2,157,732 - -1.0 2,157,732 - -0.9 2,157,732 - +1.6 2,157,732 - -0.2 2,157,732 - +0.2 2,157,732 - -0.8 2,157,732 - +1.7 2,157,735 + -1.1 2,157,735 + +1.0 2,157,735 + -0.1 2,157,735 + -2.2 2,157,736 - -0.9 2,157,736 - +0.4 2,157,736 - +0.7 2,157,736 - -0.2 2,157,736 - -0.2 2,157,736 - +0.7 2,157,736 - +1.6 2,157,759 + +0.6 2,157,842 + AO353_09885 0.15 -1.6 2,157,842 + AO353_09885 0.15 -0.9 2,157,842 + AO353_09885 0.15 -1.7 2,157,842 + AO353_09885 0.15 -0.6 2,157,843 - AO353_09885 0.15 -1.5 2,157,843 - +0.3 2,157,953 + AO353_09885 0.29 +1.2 2,157,983 + AO353_09885 0.33 -0.4 2,158,567 + -1.2 2,158,567 + +0.4 2,158,567 + -0.2 2,158,567 + -0.6 2,158,568 - +0.5 2,158,568 - +0.4 2,158,568 - +1.2 2,158,663 + AO353_09890 0.12 -1.4 2,158,663 + AO353_09890 0.12 -1.1 2,158,663 + AO353_09890 0.12 -0.1 2,158,663 + AO353_09890 0.12 -1.2 2,158,663 + AO353_09890 0.12 -1.5 2,158,663 + AO353_09890 0.12 -0.6 2,158,663 + AO353_09890 0.12 -0.3 2,158,663 + AO353_09890 0.12 +0.4 2,158,663 + AO353_09890 0.12 -1.1 2,158,664 - AO353_09890 0.12 -1.4 2,158,664 - AO353_09890 0.12 +0.5 2,158,664 - AO353_09890 0.12 -0.1 2,158,664 - AO353_09890 0.12 +0.2 2,158,751 - AO353_09890 0.22 +0.2 2,158,841 + AO353_09890 0.33 +0.4 2,158,841 + AO353_09890 0.33 -0.8 2,158,842 - AO353_09890 0.33 -0.6 2,158,842 - AO353_09890 0.33 -1.2 2,159,003 - AO353_09890 0.52 -1.6 2,159,017 + AO353_09890 0.54 -0.6 2,159,101 + AO353_09890 0.64 +1.0 2,159,281 + AO353_09890 0.86 -1.7 2,159,281 + AO353_09890 0.86 -1.2 2,159,417 - +1.1 2,159,457 + -1.3 2,159,471 + -1.4 2,159,471 + +2.0 2,159,471 + -0.8 2,159,472 - +0.3 2,159,472 - -1.4
Or see this region's nucleotide sequence