Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08900 and AO353_08905 are separated by 115 nucleotides AO353_08905 and AO353_08910 are separated by 41 nucleotides AO353_08910 and AO353_08915 are separated by 133 nucleotides
AO353_08900: AO353_08900 - hypothetical protein, at 1,955,832 to 1,957,067
_08900
AO353_08905: AO353_08905 - isoprenoid biosynthesis protein, at 1,957,183 to 1,957,848
_08905
AO353_08910: AO353_08910 - hypothetical protein, at 1,957,890 to 1,958,345
_08910
AO353_08915: AO353_08915 - cystathionine gamma-synthase, at 1,958,479 to 1,960,377
_08915
Position (kb)
1957
1958
1959 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1956.890 kb on - strand, within AO353_08900 at 1956.890 kb on - strand, within AO353_08900 at 1956.979 kb on + strand at 1956.980 kb on - strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1957.051 kb on + strand at 1957.052 kb on - strand at 1957.052 kb on - strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.125 kb on + strand at 1957.125 kb on + strand at 1957.145 kb on + strand at 1957.145 kb on + strand at 1957.146 kb on - strand at 1957.146 kb on - strand at 1957.146 kb on - strand at 1957.146 kb on - strand at 1957.156 kb on + strand at 1957.156 kb on + strand at 1957.156 kb on + strand at 1957.157 kb on - strand at 1957.157 kb on - strand at 1957.157 kb on - strand at 1957.157 kb on - strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.225 kb on + strand at 1957.225 kb on + strand at 1957.225 kb on + strand at 1957.225 kb on + strand at 1957.226 kb on - strand at 1957.226 kb on - strand at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.846 kb on + strand at 1957.847 kb on - strand at 1958.019 kb on - strand, within AO353_08910 at 1958.167 kb on + strand, within AO353_08910 at 1958.168 kb on - strand, within AO353_08910 at 1958.168 kb on - strand, within AO353_08910 at 1958.352 kb on + strand at 1958.352 kb on + strand at 1958.353 kb on - strand at 1958.353 kb on - strand at 1958.353 kb on - strand at 1958.353 kb on - strand at 1958.389 kb on + strand at 1958.436 kb on + strand at 1958.436 kb on + strand at 1958.475 kb on - strand at 1958.480 kb on + strand at 1958.523 kb on + strand at 1958.523 kb on + strand at 1958.524 kb on - strand at 1958.524 kb on - strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.573 kb on + strand at 1958.817 kb on + strand, within AO353_08915 at 1958.856 kb on - strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1959.083 kb on + strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 1,956,890 - AO353_08900 0.86 -0.5 1,956,890 - AO353_08900 0.86 +2.1 1,956,979 + -0.5 1,956,980 - -1.3 1,956,983 + +1.0 1,956,983 + +1.4 1,956,983 + +1.0 1,956,983 + -2.5 1,956,983 + +0.2 1,956,983 + -1.2 1,956,983 + +0.4 1,956,983 + -0.6 1,956,984 - +2.6 1,956,984 - -1.4 1,956,984 - -0.5 1,956,984 - -0.3 1,956,984 - -0.7 1,956,984 - -1.0 1,956,984 - +1.8 1,956,984 - +1.4 1,956,984 - +0.0 1,957,051 + +0.9 1,957,052 - -0.5 1,957,052 - +0.5 1,957,102 + -0.9 1,957,102 + +0.9 1,957,102 + +0.3 1,957,102 + -1.3 1,957,102 + -0.2 1,957,102 + -0.5 1,957,102 + +0.5 1,957,102 + +1.8 1,957,103 - +1.0 1,957,103 - +1.4 1,957,103 - -0.3 1,957,103 - +0.3 1,957,103 - +0.2 1,957,103 - +1.1 1,957,103 - -0.2 1,957,103 - -0.2 1,957,103 - +0.7 1,957,103 - +2.8 1,957,119 + -0.2 1,957,119 + -0.6 1,957,119 + +0.3 1,957,119 + -0.1 1,957,119 + +1.6 1,957,119 + +1.2 1,957,119 + +0.7 1,957,120 - +1.2 1,957,120 - +0.9 1,957,120 - +1.6 1,957,120 - -1.1 1,957,120 - -0.2 1,957,120 - +2.0 1,957,120 - -0.2 1,957,120 - +0.5 1,957,125 + -1.3 1,957,125 + -0.9 1,957,145 + +0.3 1,957,145 + +0.6 1,957,146 - -0.3 1,957,146 - +0.7 1,957,146 - +0.1 1,957,146 - +0.3 1,957,156 + +1.9 1,957,156 + +1.4 1,957,156 + +1.2 1,957,157 - -0.1 1,957,157 - +0.2 1,957,157 - -0.8 1,957,157 - +1.3 1,957,205 + -0.2 1,957,205 + -0.8 1,957,205 + -0.1 1,957,205 + +1.1 1,957,205 + -0.1 1,957,206 - +0.2 1,957,206 - +0.4 1,957,206 - +0.7 1,957,206 - +0.0 1,957,206 - -0.6 1,957,225 + +0.2 1,957,225 + +0.3 1,957,225 + -2.0 1,957,225 + +0.8 1,957,226 - -0.2 1,957,226 - -0.1 1,957,759 + AO353_08905 0.86 -0.1 1,957,759 + AO353_08905 0.86 +0.6 1,957,759 + AO353_08905 0.86 -0.6 1,957,759 + AO353_08905 0.86 -0.2 1,957,759 + AO353_08905 0.86 -0.2 1,957,759 + AO353_08905 0.86 +1.3 1,957,759 + AO353_08905 0.86 +1.1 1,957,759 + AO353_08905 0.86 +0.7 1,957,759 + AO353_08905 0.86 -1.3 1,957,759 + AO353_08905 0.86 -0.6 1,957,759 + AO353_08905 0.86 +0.6 1,957,759 + AO353_08905 0.86 +0.3 1,957,760 - AO353_08905 0.87 +0.2 1,957,760 - AO353_08905 0.87 +1.0 1,957,760 - AO353_08905 0.87 +0.3 1,957,760 - AO353_08905 0.87 +2.0 1,957,760 - AO353_08905 0.87 +0.8 1,957,760 - AO353_08905 0.87 +0.0 1,957,760 - AO353_08905 0.87 +0.7 1,957,760 - AO353_08905 0.87 +0.2 1,957,760 - AO353_08905 0.87 -0.6 1,957,760 - AO353_08905 0.87 -0.6 1,957,760 - AO353_08905 0.87 +1.7 1,957,761 + AO353_08905 0.87 +0.0 1,957,761 + AO353_08905 0.87 -1.0 1,957,761 + AO353_08905 0.87 +1.1 1,957,761 + AO353_08905 0.87 +0.2 1,957,761 + AO353_08905 0.87 +0.4 1,957,761 + AO353_08905 0.87 +1.0 1,957,761 + AO353_08905 0.87 -0.6 1,957,761 + AO353_08905 0.87 +0.7 1,957,761 + AO353_08905 0.87 -0.1 1,957,762 - AO353_08905 0.87 +1.0 1,957,762 - AO353_08905 0.87 -0.3 1,957,762 - AO353_08905 0.87 +0.6 1,957,762 - AO353_08905 0.87 +0.4 1,957,762 - AO353_08905 0.87 -0.5 1,957,762 - AO353_08905 0.87 +0.4 1,957,762 - AO353_08905 0.87 +2.2 1,957,762 - AO353_08905 0.87 +0.5 1,957,762 - AO353_08905 0.87 +0.3 1,957,803 + +0.6 1,957,803 + +0.5 1,957,803 + +0.3 1,957,803 + -1.5 1,957,803 + -0.5 1,957,804 - +0.0 1,957,804 - +0.7 1,957,804 - -1.8 1,957,804 - +0.1 1,957,804 - -0.7 1,957,804 - -0.1 1,957,804 - +0.4 1,957,804 - +0.2 1,957,846 + -2.2 1,957,847 - +0.6 1,958,019 - AO353_08910 0.28 -0.1 1,958,167 + AO353_08910 0.61 -0.5 1,958,168 - AO353_08910 0.61 -1.4 1,958,168 - AO353_08910 0.61 -0.7 1,958,352 + -0.4 1,958,352 + -0.5 1,958,353 - -0.9 1,958,353 - +0.4 1,958,353 - +0.6 1,958,353 - -0.0 1,958,389 + -0.8 1,958,436 + +0.5 1,958,436 + -0.9 1,958,475 - -0.2 1,958,480 + +0.3 1,958,523 + -0.8 1,958,523 + -0.5 1,958,524 - +0.4 1,958,524 - -0.2 1,958,525 + +0.0 1,958,525 + +1.4 1,958,525 + -0.2 1,958,525 + -0.5 1,958,525 + +0.0 1,958,525 + +0.4 1,958,525 + -0.8 1,958,525 + +0.4 1,958,525 + +0.6 1,958,525 + +0.0 1,958,525 + -0.1 1,958,525 + +0.8 1,958,525 + +1.0 1,958,525 + -1.5 1,958,525 + -0.9 1,958,525 + +1.4 1,958,525 + +0.4 1,958,525 + +1.8 1,958,526 - -0.5 1,958,526 - -0.9 1,958,526 - -0.7 1,958,526 - -1.2 1,958,526 - +0.2 1,958,526 - -1.1 1,958,526 - -2.0 1,958,526 - +0.8 1,958,526 - +0.8 1,958,526 - -0.3 1,958,526 - -0.6 1,958,526 - -0.4 1,958,526 - -0.5 1,958,526 - -0.2 1,958,526 - +1.1 1,958,573 + +0.5 1,958,817 + AO353_08915 0.18 -1.7 1,958,856 - AO353_08915 0.20 +0.1 1,958,954 + AO353_08915 0.25 +1.2 1,958,954 + AO353_08915 0.25 +0.2 1,958,954 + AO353_08915 0.25 +0.3 1,958,954 + AO353_08915 0.25 +1.0 1,958,954 + AO353_08915 0.25 +2.0 1,958,954 + AO353_08915 0.25 -0.1 1,958,955 - AO353_08915 0.25 +0.4 1,958,955 - AO353_08915 0.25 +1.5 1,958,955 - AO353_08915 0.25 -0.6 1,958,955 - AO353_08915 0.25 -1.2 1,959,083 + AO353_08915 0.32 -0.2 1,959,084 - AO353_08915 0.32 -1.6 1,959,084 - AO353_08915 0.32 +0.4 1,959,084 - AO353_08915 0.32 +0.2 1,959,084 - AO353_08915 0.32 +1.5 1,959,084 - AO353_08915 0.32 +1.0 1,959,084 - AO353_08915 0.32 -0.9 1,959,254 + AO353_08915 0.41 +0.0 1,959,254 + AO353_08915 0.41 -0.8 1,959,254 + AO353_08915 0.41 +0.1 1,959,254 + AO353_08915 0.41 +0.4 1,959,254 + AO353_08915 0.41 +0.3 1,959,254 + AO353_08915 0.41 -0.6 1,959,254 + AO353_08915 0.41 +1.7 1,959,254 + AO353_08915 0.41 +0.8 1,959,254 + AO353_08915 0.41 +1.2 1,959,254 + AO353_08915 0.41 -0.5 1,959,254 + AO353_08915 0.41 -1.4 1,959,254 + AO353_08915 0.41 -0.7 1,959,254 + AO353_08915 0.41 +0.6 1,959,254 + AO353_08915 0.41 +1.2 1,959,254 + AO353_08915 0.41 +0.9 1,959,254 + AO353_08915 0.41 -1.0 1,959,254 + AO353_08915 0.41 +0.7 1,959,254 + AO353_08915 0.41 -0.9 1,959,254 + AO353_08915 0.41 -0.1 1,959,254 + AO353_08915 0.41 -0.0 1,959,254 + AO353_08915 0.41 +0.0 1,959,254 + AO353_08915 0.41 -0.3 1,959,254 + AO353_08915 0.41 +0.8 1,959,254 + AO353_08915 0.41 -0.8 1,959,254 + AO353_08915 0.41 -2.4 1,959,254 + AO353_08915 0.41 +0.2 1,959,254 + AO353_08915 0.41 -1.3 1,959,255 - AO353_08915 0.41 +0.4 1,959,255 - AO353_08915 0.41 -0.1 1,959,255 - AO353_08915 0.41 -2.6 1,959,255 - AO353_08915 0.41 -2.4 1,959,255 - AO353_08915 0.41 -0.0 1,959,255 - AO353_08915 0.41 -0.2 1,959,255 - AO353_08915 0.41 +0.4 1,959,255 - AO353_08915 0.41 -0.9 1,959,255 - AO353_08915 0.41 +0.1 1,959,255 - AO353_08915 0.41 +0.3 1,959,255 - AO353_08915 0.41 -2.2 1,959,255 - AO353_08915 0.41 +0.0 1,959,255 - AO353_08915 0.41 -0.5 1,959,255 - AO353_08915 0.41 -0.4 1,959,255 - AO353_08915 0.41 +1.2 1,959,255 - AO353_08915 0.41 -1.2 1,959,255 - AO353_08915 0.41 +1.5 1,959,255 - AO353_08915 0.41 -0.8
Or see this region's nucleotide sequence