Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08435 and AO353_08440 are separated by 188 nucleotides AO353_08440 and AO353_08445 are separated by 184 nucleotides AO353_08445 and AO353_08450 are separated by 63 nucleotides AO353_08450 and AO353_08455 are separated by 97 nucleotides
AO353_08435: AO353_08435 - phosphatidylglycerophosphatase, at 1,855,682 to 1,856,278
_08435
AO353_08440: AO353_08440 - hypothetical protein, at 1,856,467 to 1,856,670
_08440
AO353_08445: AO353_08445 - thymidylate synthase, at 1,856,855 to 1,857,826
_08445
AO353_08450: AO353_08450 - prolipoprotein diacylglyceryl transferase, at 1,857,890 to 1,858,705
_08450
AO353_08455: AO353_08455 - hypothetical protein, at 1,858,803 to 1,859,585
_08455
Position (kb)
1856
1857
1858 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1855.860 kb on + strand, within AO353_08435 at 1855.860 kb on + strand, within AO353_08435 at 1855.932 kb on - strand, within AO353_08435 at 1856.092 kb on + strand, within AO353_08435 at 1856.092 kb on + strand, within AO353_08435 at 1856.093 kb on - strand, within AO353_08435 at 1856.093 kb on - strand, within AO353_08435 at 1856.093 kb on - strand, within AO353_08435 at 1856.093 kb on - strand, within AO353_08435 at 1856.093 kb on - strand, within AO353_08435 at 1856.169 kb on - strand, within AO353_08435 at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.345 kb on + strand at 1856.346 kb on - strand at 1856.346 kb on - strand at 1856.346 kb on - strand at 1856.346 kb on - strand at 1856.346 kb on - strand at 1856.346 kb on - strand at 1856.346 kb on - strand at 1856.346 kb on - strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.348 kb on + strand at 1856.349 kb on - strand at 1856.349 kb on - strand at 1856.349 kb on - strand at 1856.349 kb on - strand at 1856.349 kb on - strand at 1856.349 kb on - strand at 1856.349 kb on - strand at 1856.455 kb on + strand at 1856.515 kb on + strand, within AO353_08440 at 1856.515 kb on + strand, within AO353_08440 at 1856.515 kb on + strand, within AO353_08440 at 1856.515 kb on + strand, within AO353_08440 at 1856.515 kb on + strand, within AO353_08440 at 1856.544 kb on - strand, within AO353_08440 at 1856.685 kb on + strand at 1856.685 kb on + strand at 1856.685 kb on + strand at 1856.685 kb on + strand at 1856.686 kb on - strand at 1856.686 kb on - strand at 1856.708 kb on + strand at 1856.708 kb on + strand at 1856.732 kb on + strand at 1856.732 kb on + strand at 1856.732 kb on + strand at 1856.732 kb on + strand at 1856.732 kb on + strand at 1856.732 kb on + strand at 1856.732 kb on + strand at 1856.733 kb on - strand at 1856.733 kb on - strand at 1856.733 kb on - strand at 1856.733 kb on - strand at 1856.733 kb on - strand at 1856.733 kb on - strand at 1856.734 kb on + strand at 1856.734 kb on + strand at 1856.735 kb on - strand at 1856.735 kb on - strand at 1856.735 kb on - strand at 1856.784 kb on + strand at 1856.784 kb on + strand at 1856.784 kb on + strand at 1856.784 kb on + strand at 1856.784 kb on + strand at 1856.784 kb on + strand at 1856.784 kb on + strand at 1856.784 kb on + strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.785 kb on - strand at 1856.792 kb on + strand at 1856.793 kb on - strand at 1856.793 kb on - strand at 1856.856 kb on + strand at 1856.856 kb on + strand at 1856.856 kb on + strand at 1856.856 kb on + strand at 1856.856 kb on + strand at 1856.856 kb on + strand at 1856.857 kb on - strand at 1856.857 kb on - strand at 1856.857 kb on - strand at 1857.832 kb on - strand at 1857.832 kb on - strand at 1857.832 kb on - strand at 1857.832 kb on - strand at 1857.832 kb on - strand at 1857.832 kb on - strand at 1857.832 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.877 kb on - strand at 1857.892 kb on - strand at 1857.892 kb on - strand at 1857.892 kb on - strand at 1857.892 kb on - strand at 1857.931 kb on - strand at 1858.720 kb on - strand at 1858.733 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 1,855,860 + AO353_08435 0.30 +0.4 1,855,860 + AO353_08435 0.30 -0.4 1,855,932 - AO353_08435 0.42 +2.0 1,856,092 + AO353_08435 0.69 +0.5 1,856,092 + AO353_08435 0.69 +0.6 1,856,093 - AO353_08435 0.69 -0.6 1,856,093 - AO353_08435 0.69 -1.0 1,856,093 - AO353_08435 0.69 +0.6 1,856,093 - AO353_08435 0.69 +0.4 1,856,093 - AO353_08435 0.69 +1.4 1,856,169 - AO353_08435 0.82 +1.6 1,856,345 + -1.5 1,856,345 + +0.1 1,856,345 + -1.6 1,856,345 + +1.2 1,856,345 + -2.0 1,856,345 + +1.8 1,856,345 + +0.8 1,856,345 + +1.8 1,856,345 + +0.8 1,856,346 - +1.5 1,856,346 - -0.0 1,856,346 - +0.3 1,856,346 - -0.6 1,856,346 - +1.5 1,856,346 - -0.7 1,856,346 - -1.4 1,856,346 - -0.2 1,856,348 + -0.8 1,856,348 + +0.3 1,856,348 + +1.4 1,856,348 + +0.4 1,856,348 + +0.3 1,856,348 + +1.0 1,856,348 + +0.7 1,856,348 + -0.7 1,856,348 + -0.5 1,856,349 - +0.5 1,856,349 - -1.7 1,856,349 - +1.8 1,856,349 - -0.5 1,856,349 - +0.4 1,856,349 - +1.3 1,856,349 - +0.4 1,856,455 + +0.4 1,856,515 + AO353_08440 0.24 -0.5 1,856,515 + AO353_08440 0.24 +1.4 1,856,515 + AO353_08440 0.24 +1.3 1,856,515 + AO353_08440 0.24 +0.1 1,856,515 + AO353_08440 0.24 -0.4 1,856,544 - AO353_08440 0.38 -1.4 1,856,685 + -0.8 1,856,685 + -0.2 1,856,685 + -1.1 1,856,685 + -0.9 1,856,686 - -0.2 1,856,686 - +0.5 1,856,708 + -1.0 1,856,708 + +0.3 1,856,732 + -0.7 1,856,732 + -0.9 1,856,732 + -0.4 1,856,732 + -0.3 1,856,732 + -0.9 1,856,732 + -0.6 1,856,732 + -0.6 1,856,733 - -0.5 1,856,733 - -0.4 1,856,733 - -0.4 1,856,733 - -0.2 1,856,733 - -0.0 1,856,733 - -1.9 1,856,734 + -0.2 1,856,734 + -1.7 1,856,735 - -0.3 1,856,735 - +0.7 1,856,735 - +0.8 1,856,784 + -0.9 1,856,784 + -0.5 1,856,784 + +1.0 1,856,784 + -0.0 1,856,784 + +0.3 1,856,784 + -0.2 1,856,784 + +0.1 1,856,784 + +0.4 1,856,785 - -1.6 1,856,785 - -0.9 1,856,785 - -0.4 1,856,785 - -0.9 1,856,785 - +0.2 1,856,785 - +1.0 1,856,785 - +1.3 1,856,785 - +0.9 1,856,785 - -0.9 1,856,785 - -2.7 1,856,785 - +1.7 1,856,785 - -0.2 1,856,785 - +0.8 1,856,785 - +0.5 1,856,792 + +1.4 1,856,793 - -1.6 1,856,793 - +1.0 1,856,856 + +0.7 1,856,856 + -0.7 1,856,856 + +1.4 1,856,856 + -2.1 1,856,856 + +1.1 1,856,856 + -0.0 1,856,857 - -0.1 1,856,857 - +1.5 1,856,857 - +0.4 1,857,832 - -0.8 1,857,832 - -1.6 1,857,832 - -0.6 1,857,832 - +1.4 1,857,832 - -2.1 1,857,832 - -0.2 1,857,832 - -0.4 1,857,877 - +1.0 1,857,877 - +0.8 1,857,877 - -0.4 1,857,877 - +1.0 1,857,877 - -0.6 1,857,877 - -0.9 1,857,877 - -0.4 1,857,877 - +0.2 1,857,877 - -2.0 1,857,892 - +0.4 1,857,892 - -0.7 1,857,892 - +0.6 1,857,892 - +0.2 1,857,931 - +1.2 1,858,720 - -0.8 1,858,733 - +1.0
Or see this region's nucleotide sequence