Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03700 and AO353_03705 are separated by 182 nucleotides AO353_03705 and AO353_03710 are separated by 80 nucleotides AO353_03710 and AO353_03715 are separated by 340 nucleotides AO353_03715 and AO353_03720 are separated by 100 nucleotides
AO353_03700: AO353_03700 - hypothetical protein, at 791,567 to 792,562
_03700
AO353_03705: AO353_03705 - hypothetical protein, at 792,745 to 792,951
_03705
AO353_03710: AO353_03710 - formyltetrahydrofolate deformylase, at 793,032 to 793,880
_03710
AO353_03715: AO353_03715 - H-NS histone, at 794,221 to 794,595
_03715
AO353_03720: AO353_03720 - exonuclease I, at 794,696 to 796,123
_03720
Position (kb) 793
794 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 792.071 kb on + strand, within AO353_03700 at 792.072 kb on - strand, within AO353_03700 at 792.125 kb on - strand, within AO353_03700 at 792.125 kb on - strand, within AO353_03700 at 792.222 kb on + strand, within AO353_03700 at 792.222 kb on + strand, within AO353_03700 at 792.222 kb on + strand, within AO353_03700 at 792.223 kb on - strand, within AO353_03700 at 792.223 kb on - strand, within AO353_03700 at 792.223 kb on - strand, within AO353_03700 at 792.223 kb on - strand, within AO353_03700 at 792.258 kb on - strand, within AO353_03700 at 792.259 kb on + strand, within AO353_03700 at 792.260 kb on - strand, within AO353_03700 at 792.260 kb on - strand, within AO353_03700 at 792.260 kb on - strand, within AO353_03700 at 792.260 kb on - strand, within AO353_03700 at 792.269 kb on + strand, within AO353_03700 at 792.269 kb on + strand, within AO353_03700 at 792.269 kb on + strand, within AO353_03700 at 792.270 kb on - strand, within AO353_03700 at 792.270 kb on - strand, within AO353_03700 at 792.270 kb on - strand, within AO353_03700 at 792.270 kb on - strand, within AO353_03700 at 792.424 kb on + strand, within AO353_03700 at 792.470 kb on + strand at 792.470 kb on + strand at 792.470 kb on + strand at 792.470 kb on + strand at 792.470 kb on + strand at 792.470 kb on + strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.471 kb on - strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.473 kb on + strand at 792.474 kb on - strand at 792.474 kb on - strand at 792.474 kb on - strand at 792.474 kb on - strand at 792.479 kb on + strand at 792.479 kb on + strand at 792.479 kb on + strand at 792.479 kb on + strand at 792.479 kb on + strand at 792.479 kb on + strand at 792.479 kb on + strand at 792.480 kb on - strand at 792.480 kb on - strand at 792.480 kb on - strand at 792.480 kb on - strand at 792.480 kb on - strand at 792.580 kb on + strand at 792.580 kb on + strand at 792.589 kb on - strand at 792.599 kb on + strand at 792.646 kb on - strand at 792.646 kb on - strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.753 kb on + strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.754 kb on - strand at 792.959 kb on - strand at 793.049 kb on + strand at 793.369 kb on + strand, within AO353_03710 at 793.370 kb on - strand, within AO353_03710 at 793.370 kb on - strand, within AO353_03710 at 793.472 kb on - strand, within AO353_03710 at 793.612 kb on - strand, within AO353_03710 at 793.612 kb on - strand, within AO353_03710 at 793.826 kb on + strand at 793.835 kb on + strand at 793.920 kb on - strand at 793.965 kb on + strand at 794.014 kb on + strand at 794.014 kb on + strand at 794.014 kb on + strand at 794.015 kb on - strand at 794.015 kb on - strand at 794.020 kb on - strand at 794.031 kb on - strand at 794.031 kb on - strand at 794.052 kb on + strand at 794.052 kb on + strand at 794.052 kb on + strand at 794.124 kb on - strand at 794.147 kb on + strand at 794.168 kb on + strand at 794.171 kb on + strand at 794.172 kb on - strand at 794.184 kb on + strand at 794.184 kb on + strand at 794.208 kb on + strand at 794.208 kb on + strand at 794.208 kb on + strand at 794.208 kb on + strand at 794.209 kb on - strand at 794.209 kb on - strand at 794.209 kb on - strand at 794.209 kb on - strand at 794.209 kb on - strand at 794.209 kb on - strand at 794.209 kb on - strand at 794.213 kb on + strand at 794.214 kb on - strand at 794.259 kb on + strand, within AO353_03715 at 794.259 kb on + strand, within AO353_03715 at 794.412 kb on + strand, within AO353_03715 at 794.473 kb on + strand, within AO353_03715 at 794.679 kb on + strand at 794.679 kb on + strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.680 kb on - strand at 794.685 kb on + strand at 794.685 kb on + strand at 794.686 kb on - strand at 794.686 kb on - strand at 794.717 kb on + strand at 794.718 kb on - strand at 794.730 kb on + strand at 794.731 kb on - strand at 794.751 kb on - strand at 794.751 kb on - strand at 794.751 kb on - strand at 794.751 kb on - strand at 794.770 kb on + strand at 794.770 kb on + strand at 794.777 kb on - strand at 794.777 kb on - strand at 794.804 kb on - strand at 794.804 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 792,071 + AO353_03700 0.51 -1.8 792,072 - AO353_03700 0.51 +0.6 792,125 - AO353_03700 0.56 -0.3 792,125 - AO353_03700 0.56 +0.2 792,222 + AO353_03700 0.66 +1.7 792,222 + AO353_03700 0.66 -1.4 792,222 + AO353_03700 0.66 -0.6 792,223 - AO353_03700 0.66 -2.2 792,223 - AO353_03700 0.66 +1.4 792,223 - AO353_03700 0.66 -0.6 792,223 - AO353_03700 0.66 -0.2 792,258 - AO353_03700 0.69 -1.4 792,259 + AO353_03700 0.69 +0.2 792,260 - AO353_03700 0.70 +0.6 792,260 - AO353_03700 0.70 -0.2 792,260 - AO353_03700 0.70 -0.9 792,260 - AO353_03700 0.70 +1.4 792,269 + AO353_03700 0.70 +0.6 792,269 + AO353_03700 0.70 +1.2 792,269 + AO353_03700 0.70 -2.2 792,270 - AO353_03700 0.71 +1.8 792,270 - AO353_03700 0.71 +0.2 792,270 - AO353_03700 0.71 -1.7 792,270 - AO353_03700 0.71 +1.5 792,424 + AO353_03700 0.86 +0.8 792,470 + +0.2 792,470 + +0.2 792,470 + -1.7 792,470 + -0.0 792,470 + +1.0 792,470 + +0.0 792,471 - -0.4 792,471 - -0.4 792,471 - +1.7 792,471 - +1.0 792,471 - -0.3 792,471 - +1.9 792,471 - -1.0 792,471 - +0.5 792,471 - -0.3 792,471 - +0.1 792,473 + -1.3 792,473 + +0.6 792,473 + +0.8 792,473 + +2.4 792,473 + +1.0 792,473 + -0.4 792,473 + +0.4 792,473 + +0.8 792,473 + -0.1 792,473 + +0.8 792,474 - -0.4 792,474 - -0.6 792,474 - +1.6 792,474 - +0.2 792,479 + -0.2 792,479 + -1.3 792,479 + +0.9 792,479 + +1.5 792,479 + +1.0 792,479 + -1.1 792,479 + -0.7 792,480 - +0.4 792,480 - -0.7 792,480 - +2.4 792,480 - -1.3 792,480 - -1.3 792,580 + +1.8 792,580 + +0.2 792,589 - +0.6 792,599 + -0.3 792,646 - +1.0 792,646 - +1.4 792,753 + -0.1 792,753 + +1.4 792,753 + -1.4 792,753 + -0.3 792,753 + -2.4 792,753 + -0.4 792,753 + +0.3 792,753 + -1.0 792,753 + +0.9 792,753 + -1.7 792,753 + -0.8 792,753 + -1.6 792,754 - +0.4 792,754 - -0.2 792,754 - -0.5 792,754 - -0.6 792,754 - +0.4 792,754 - -0.2 792,754 - +0.2 792,754 - -1.9 792,754 - -0.6 792,754 - -1.3 792,959 - +0.4 793,049 + -0.8 793,369 + AO353_03710 0.40 -0.2 793,370 - AO353_03710 0.40 -0.6 793,370 - AO353_03710 0.40 -1.3 793,472 - AO353_03710 0.52 -0.8 793,612 - AO353_03710 0.68 -0.0 793,612 - AO353_03710 0.68 -1.6 793,826 + +0.0 793,835 + -1.2 793,920 - -1.1 793,965 + -1.3 794,014 + -1.1 794,014 + -0.1 794,014 + +0.1 794,015 - +2.2 794,015 - -1.7 794,020 - +0.2 794,031 - +2.1 794,031 - +1.0 794,052 + +0.2 794,052 + -0.4 794,052 + -0.4 794,124 - -0.4 794,147 + -0.9 794,168 + +1.0 794,171 + -0.4 794,172 - -0.4 794,184 + -2.2 794,184 + -0.1 794,208 + -1.0 794,208 + -1.2 794,208 + -0.2 794,208 + -0.1 794,209 - -0.6 794,209 - -0.6 794,209 - -2.0 794,209 - -1.0 794,209 - +0.6 794,209 - -0.4 794,209 - +0.4 794,213 + +0.4 794,214 - -2.0 794,259 + AO353_03715 0.10 +0.7 794,259 + AO353_03715 0.10 -0.7 794,412 + AO353_03715 0.51 -1.0 794,473 + AO353_03715 0.67 +0.6 794,679 + -0.2 794,679 + -1.0 794,680 - -0.4 794,680 - +0.1 794,680 - -1.1 794,680 - -0.3 794,680 - +2.9 794,680 - -0.3 794,680 - +1.4 794,680 - -1.0 794,680 - +1.2 794,685 + -1.0 794,685 + -0.8 794,686 - -1.1 794,686 - +1.5 794,717 + +0.6 794,718 - +0.9 794,730 + -1.2 794,731 - +0.1 794,751 - -0.6 794,751 - +0.4 794,751 - +0.0 794,751 - +1.2 794,770 + -1.2 794,770 + -1.2 794,777 - -0.8 794,777 - +1.4 794,804 - -1.3 794,804 - +0.2
Or see this region's nucleotide sequence