Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00920 and AO353_00925 are separated by 262 nucleotides AO353_00925 and AO353_00930 are separated by 170 nucleotides AO353_00930 and AO353_00935 are separated by 174 nucleotides
AO353_00920: AO353_00920 - alpha-L-glutamate ligase, at 209,309 to 210,295
_00920
AO353_00925: AO353_00925 - aminodeoxychorismate synthase component I, at 210,558 to 211,901
_00925
AO353_00930: AO353_00930 - phosphoserine phosphatase, at 212,072 to 212,689
_00930
AO353_00935: AO353_00935 - phosphoadenosine phosphosulfate reductase, at 212,864 to 213,598
_00935
Position (kb) 210
211
212 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 209.699 kb on + strand, within AO353_00920 at 209.699 kb on + strand, within AO353_00920 at 209.699 kb on + strand, within AO353_00920 at 209.699 kb on + strand, within AO353_00920 at 209.700 kb on - strand, within AO353_00920 at 209.777 kb on + strand, within AO353_00920 at 209.777 kb on + strand, within AO353_00920 at 209.778 kb on - strand, within AO353_00920 at 209.778 kb on - strand, within AO353_00920 at 209.986 kb on - strand, within AO353_00920 at 209.986 kb on - strand, within AO353_00920 at 210.005 kb on + strand, within AO353_00920 at 210.005 kb on + strand, within AO353_00920 at 210.041 kb on + strand, within AO353_00920 at 210.041 kb on + strand, within AO353_00920 at 210.041 kb on + strand, within AO353_00920 at 210.041 kb on + strand, within AO353_00920 at 210.041 kb on + strand, within AO353_00920 at 210.041 kb on + strand, within AO353_00920 at 210.042 kb on - strand, within AO353_00920 at 210.042 kb on - strand, within AO353_00920 at 210.063 kb on - strand, within AO353_00920 at 210.063 kb on - strand, within AO353_00920 at 210.294 kb on - strand at 210.294 kb on - strand at 210.343 kb on + strand at 210.343 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.364 kb on + strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.365 kb on - strand at 210.390 kb on + strand at 210.391 kb on - strand at 210.471 kb on + strand at 210.471 kb on + strand at 210.471 kb on + strand at 210.471 kb on + strand at 210.471 kb on + strand at 210.471 kb on + strand at 210.471 kb on + strand at 210.471 kb on + strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.472 kb on - strand at 210.494 kb on - strand at 210.516 kb on + strand at 210.516 kb on + strand at 210.516 kb on + strand at 210.517 kb on - strand at 210.517 kb on - strand at 210.517 kb on - strand at 210.517 kb on - strand at 210.517 kb on - strand at 210.575 kb on - strand at 210.575 kb on - strand at 210.575 kb on - strand at 210.575 kb on - strand at 210.575 kb on - strand at 210.643 kb on + strand at 210.643 kb on + strand at 210.644 kb on - strand at 210.644 kb on - strand at 210.644 kb on - strand at 210.644 kb on - strand at 210.684 kb on + strand at 210.684 kb on + strand at 210.684 kb on + strand at 210.684 kb on + strand at 210.685 kb on - strand at 210.817 kb on + strand, within AO353_00925 at 210.817 kb on + strand, within AO353_00925 at 210.817 kb on + strand, within AO353_00925 at 210.817 kb on + strand, within AO353_00925 at 210.818 kb on - strand, within AO353_00925 at 210.818 kb on - strand, within AO353_00925 at 210.844 kb on - strand, within AO353_00925 at 210.933 kb on + strand, within AO353_00925 at 210.933 kb on + strand, within AO353_00925 at 210.934 kb on - strand, within AO353_00925 at 210.934 kb on - strand, within AO353_00925 at 210.934 kb on - strand, within AO353_00925 at 211.110 kb on + strand, within AO353_00925 at 211.111 kb on - strand, within AO353_00925 at 211.140 kb on + strand, within AO353_00925 at 211.140 kb on + strand, within AO353_00925 at 211.140 kb on + strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.141 kb on - strand, within AO353_00925 at 211.161 kb on + strand, within AO353_00925 at 211.162 kb on - strand, within AO353_00925 at 211.162 kb on - strand, within AO353_00925 at 211.339 kb on + strand, within AO353_00925 at 211.339 kb on + strand, within AO353_00925 at 211.339 kb on + strand, within AO353_00925 at 211.340 kb on - strand, within AO353_00925 at 211.340 kb on - strand, within AO353_00925 at 211.340 kb on - strand, within AO353_00925 at 211.340 kb on - strand, within AO353_00925 at 211.704 kb on + strand, within AO353_00925 at 211.722 kb on + strand, within AO353_00925 at 211.722 kb on + strand, within AO353_00925 at 211.722 kb on + strand, within AO353_00925 at 211.723 kb on - strand, within AO353_00925 at 211.723 kb on - strand, within AO353_00925 at 211.723 kb on - strand, within AO353_00925 at 211.723 kb on - strand, within AO353_00925 at 211.723 kb on - strand, within AO353_00925 at 211.732 kb on + strand, within AO353_00925 at 211.732 kb on + strand, within AO353_00925 at 211.766 kb on + strand, within AO353_00925 at 211.766 kb on + strand, within AO353_00925 at 211.766 kb on + strand, within AO353_00925 at 211.767 kb on - strand at 211.767 kb on - strand at 211.846 kb on - strand at 211.993 kb on + strand at 211.994 kb on - strand at 211.994 kb on - strand at 212.002 kb on - strand at 212.002 kb on - strand at 212.073 kb on + strand at 212.073 kb on + strand at 212.073 kb on + strand at 212.229 kb on + strand, within AO353_00930 at 212.229 kb on + strand, within AO353_00930 at 212.229 kb on + strand, within AO353_00930 at 212.229 kb on + strand, within AO353_00930 at 212.230 kb on - strand, within AO353_00930 at 212.230 kb on - strand, within AO353_00930 at 212.259 kb on + strand, within AO353_00930 at 212.259 kb on + strand, within AO353_00930 at 212.259 kb on + strand, within AO353_00930 at 212.259 kb on + strand, within AO353_00930 at 212.260 kb on - strand, within AO353_00930 at 212.260 kb on - strand, within AO353_00930 at 212.260 kb on - strand, within AO353_00930 at 212.260 kb on - strand, within AO353_00930 at 212.410 kb on - strand, within AO353_00930 at 212.585 kb on - strand, within AO353_00930 at 212.706 kb on + strand at 212.706 kb on + strand at 212.707 kb on - strand at 212.707 kb on - strand at 212.707 kb on - strand at 212.748 kb on + strand at 212.758 kb on + strand at 212.758 kb on + strand at 212.758 kb on + strand at 212.758 kb on + strand at 212.758 kb on + strand at 212.758 kb on + strand at 212.759 kb on - strand at 212.808 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.822 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand at 212.824 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 209,699 + AO353_00920 0.40 -1.1 209,699 + AO353_00920 0.40 -1.0 209,699 + AO353_00920 0.40 +0.4 209,699 + AO353_00920 0.40 -1.5 209,700 - AO353_00920 0.40 +1.4 209,777 + AO353_00920 0.47 -0.8 209,777 + AO353_00920 0.47 -0.1 209,778 - AO353_00920 0.48 -1.0 209,778 - AO353_00920 0.48 +0.9 209,986 - AO353_00920 0.69 -0.6 209,986 - AO353_00920 0.69 -1.5 210,005 + AO353_00920 0.71 -1.2 210,005 + AO353_00920 0.71 +0.6 210,041 + AO353_00920 0.74 -0.1 210,041 + AO353_00920 0.74 +2.0 210,041 + AO353_00920 0.74 +1.6 210,041 + AO353_00920 0.74 +0.3 210,041 + AO353_00920 0.74 -0.3 210,041 + AO353_00920 0.74 -2.5 210,042 - AO353_00920 0.74 +0.6 210,042 - AO353_00920 0.74 +2.2 210,063 - AO353_00920 0.76 -0.2 210,063 - AO353_00920 0.76 +1.3 210,294 - -0.4 210,294 - +0.6 210,343 + +0.7 210,343 + -0.3 210,364 + +0.0 210,364 + -0.4 210,364 + -1.7 210,364 + +0.7 210,364 + -0.5 210,364 + +0.5 210,364 + +0.6 210,364 + +1.7 210,364 + +0.9 210,364 + +0.9 210,364 + +0.0 210,364 + -0.1 210,365 - -0.3 210,365 - +0.3 210,365 - -0.3 210,365 - -0.3 210,365 - +1.3 210,365 - +0.8 210,365 - -0.5 210,365 - -0.5 210,365 - +0.6 210,365 - -0.2 210,365 - -2.4 210,365 - +0.0 210,365 - -1.1 210,365 - +0.7 210,365 - -0.1 210,390 + +0.7 210,391 - +0.3 210,471 + +0.5 210,471 + +0.4 210,471 + -0.6 210,471 + -1.1 210,471 + +0.6 210,471 + +0.6 210,471 + -1.1 210,471 + +0.1 210,472 - -1.4 210,472 - -1.7 210,472 - -0.1 210,472 - -2.0 210,472 - -1.3 210,472 - +0.2 210,472 - -1.6 210,472 - +0.8 210,472 - -0.2 210,472 - -0.2 210,472 - +0.5 210,472 - +1.8 210,472 - -0.1 210,472 - -0.1 210,472 - +0.2 210,494 - -0.0 210,516 + -2.1 210,516 + -0.6 210,516 + +1.2 210,517 - +0.2 210,517 - -0.2 210,517 - -0.8 210,517 - -0.2 210,517 - +0.3 210,575 - -2.5 210,575 - -2.1 210,575 - +0.1 210,575 - +1.8 210,575 - +0.3 210,643 + -0.8 210,643 + +1.3 210,644 - +0.1 210,644 - +0.3 210,644 - +0.4 210,644 - -0.2 210,684 + -0.0 210,684 + +0.7 210,684 + -0.6 210,684 + +0.2 210,685 - -0.1 210,817 + AO353_00925 0.19 -0.5 210,817 + AO353_00925 0.19 -1.6 210,817 + AO353_00925 0.19 +1.3 210,817 + AO353_00925 0.19 +0.7 210,818 - AO353_00925 0.19 -0.4 210,818 - AO353_00925 0.19 +0.4 210,844 - AO353_00925 0.21 +0.0 210,933 + AO353_00925 0.28 +0.2 210,933 + AO353_00925 0.28 +1.6 210,934 - AO353_00925 0.28 +1.3 210,934 - AO353_00925 0.28 +0.3 210,934 - AO353_00925 0.28 +1.0 211,110 + AO353_00925 0.41 -1.7 211,111 - AO353_00925 0.41 -0.0 211,140 + AO353_00925 0.43 -1.1 211,140 + AO353_00925 0.43 +1.0 211,140 + AO353_00925 0.43 -0.0 211,141 - AO353_00925 0.43 -1.1 211,141 - AO353_00925 0.43 -1.1 211,141 - AO353_00925 0.43 +0.6 211,141 - AO353_00925 0.43 +0.7 211,141 - AO353_00925 0.43 +2.4 211,141 - AO353_00925 0.43 +0.5 211,141 - AO353_00925 0.43 +0.5 211,141 - AO353_00925 0.43 +2.2 211,141 - AO353_00925 0.43 -0.1 211,141 - AO353_00925 0.43 +0.0 211,141 - AO353_00925 0.43 -0.2 211,161 + AO353_00925 0.45 +0.8 211,162 - AO353_00925 0.45 +0.4 211,162 - AO353_00925 0.45 +0.3 211,339 + AO353_00925 0.58 -0.1 211,339 + AO353_00925 0.58 +1.0 211,339 + AO353_00925 0.58 +1.4 211,340 - AO353_00925 0.58 +0.6 211,340 - AO353_00925 0.58 -0.4 211,340 - AO353_00925 0.58 -0.0 211,340 - AO353_00925 0.58 +0.4 211,704 + AO353_00925 0.85 +0.2 211,722 + AO353_00925 0.87 -0.6 211,722 + AO353_00925 0.87 -0.2 211,722 + AO353_00925 0.87 +0.3 211,723 - AO353_00925 0.87 -2.3 211,723 - AO353_00925 0.87 -0.6 211,723 - AO353_00925 0.87 +0.6 211,723 - AO353_00925 0.87 -0.7 211,723 - AO353_00925 0.87 -0.9 211,732 + AO353_00925 0.87 +0.0 211,732 + AO353_00925 0.87 -0.2 211,766 + AO353_00925 0.90 +0.5 211,766 + AO353_00925 0.90 +0.5 211,766 + AO353_00925 0.90 +0.7 211,767 - +0.9 211,767 - -0.7 211,846 - -1.3 211,993 + +0.7 211,994 - -2.8 211,994 - +0.7 212,002 - +0.3 212,002 - +0.8 212,073 + -1.7 212,073 + +1.3 212,073 + -1.8 212,229 + AO353_00930 0.25 -0.9 212,229 + AO353_00930 0.25 +1.4 212,229 + AO353_00930 0.25 +0.8 212,229 + AO353_00930 0.25 +1.4 212,230 - AO353_00930 0.26 +0.7 212,230 - AO353_00930 0.26 -1.0 212,259 + AO353_00930 0.30 +0.0 212,259 + AO353_00930 0.30 +0.5 212,259 + AO353_00930 0.30 -0.5 212,259 + AO353_00930 0.30 -0.4 212,260 - AO353_00930 0.30 -0.1 212,260 - AO353_00930 0.30 +1.0 212,260 - AO353_00930 0.30 -0.5 212,260 - AO353_00930 0.30 +0.0 212,410 - AO353_00930 0.55 -0.5 212,585 - AO353_00930 0.83 +1.6 212,706 + -0.4 212,706 + -1.4 212,707 - +0.3 212,707 - -0.9 212,707 - +0.4 212,748 + -0.6 212,758 + +0.8 212,758 + +0.5 212,758 + +0.5 212,758 + -0.9 212,758 + +1.3 212,758 + -2.4 212,759 - +0.0 212,808 + -0.6 212,822 + -1.1 212,822 + +0.8 212,822 + +1.2 212,822 + -0.4 212,822 + -0.4 212,822 + +0.7 212,822 + -1.4 212,822 + -0.5 212,822 + -0.2 212,822 + -0.8 212,822 + +2.2 212,822 + +0.1 212,822 + +0.8 212,824 + +0.6 212,824 + -1.4 212,824 + +0.5 212,824 + -1.5 212,824 + -0.3 212,824 + -0.4 212,824 + -0.8 212,824 + +1.1 212,824 + -0.4 212,824 + -0.1 212,824 + -0.1 212,824 + +0.3 212,824 + +0.1
Or see this region's nucleotide sequence