Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_004333 and ABIE53_004334 are separated by 80 nucleotides ABIE53_004334 and ABIE53_004335 are separated by 107 nucleotides ABIE53_004335 and ABIE53_004336 are separated by 71 nucleotides ABIE53_004336 and ABIE53_004337 are separated by 53 nucleotides
ABIE53_004333: ABIE53_004333 - iron(II)-dependent oxidoreductase, at 509,451 to 510,779
_004333
ABIE53_004334: ABIE53_004334 - 3-oxoacyl-[acyl-carrier protein] reductase, at 510,860 to 511,603
_004334
ABIE53_004335: ABIE53_004335 - DNA-binding transcriptional LysR family regulator, at 511,711 to 512,634
_004335
ABIE53_004336: ABIE53_004336 - hypothetical protein, at 512,706 to 513,008
_004336
ABIE53_004337: ABIE53_004337 - DNA-binding transcriptional LysR family regulator, at 513,062 to 513,985
_004337
Position (kb) 511
512
513 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 510.738 kb on + strand at 510.738 kb on + strand at 510.738 kb on + strand at 510.738 kb on + strand at 510.738 kb on + strand at 510.739 kb on - strand at 510.739 kb on - strand at 510.739 kb on - strand at 510.739 kb on - strand at 510.739 kb on - strand at 510.739 kb on - strand at 510.744 kb on + strand at 510.744 kb on + strand at 510.744 kb on + strand at 510.745 kb on - strand at 510.750 kb on + strand at 510.750 kb on + strand at 510.751 kb on - strand at 510.751 kb on - strand at 510.791 kb on + strand at 510.791 kb on + strand at 510.791 kb on + strand at 510.791 kb on + strand at 510.791 kb on + strand at 510.792 kb on - strand at 510.792 kb on - strand at 510.792 kb on - strand at 510.792 kb on - strand at 510.792 kb on - strand at 510.830 kb on + strand at 510.830 kb on + strand at 510.830 kb on + strand at 510.831 kb on - strand at 510.831 kb on - strand at 510.844 kb on + strand at 510.845 kb on - strand at 510.930 kb on + strand at 510.930 kb on + strand at 510.930 kb on + strand at 510.930 kb on + strand at 510.930 kb on + strand at 510.930 kb on + strand at 510.930 kb on + strand at 510.931 kb on - strand at 510.931 kb on - strand at 510.931 kb on - strand at 510.931 kb on - strand at 510.931 kb on - strand at 510.931 kb on - strand at 510.931 kb on - strand at 511.137 kb on + strand, within ABIE53_004334 at 511.138 kb on - strand, within ABIE53_004334 at 511.138 kb on - strand, within ABIE53_004334 at 511.138 kb on - strand, within ABIE53_004334 at 511.138 kb on - strand, within ABIE53_004334 at 511.213 kb on + strand, within ABIE53_004334 at 511.214 kb on - strand, within ABIE53_004334 at 511.214 kb on - strand, within ABIE53_004334 at 511.311 kb on - strand, within ABIE53_004334 at 511.491 kb on + strand, within ABIE53_004334 at 511.491 kb on + strand, within ABIE53_004334 at 511.491 kb on + strand, within ABIE53_004334 at 511.491 kb on + strand, within ABIE53_004334 at 511.491 kb on + strand, within ABIE53_004334 at 511.491 kb on + strand, within ABIE53_004334 at 511.491 kb on + strand, within ABIE53_004334 at 511.492 kb on - strand, within ABIE53_004334 at 511.492 kb on - strand, within ABIE53_004334 at 511.492 kb on - strand, within ABIE53_004334 at 511.502 kb on + strand, within ABIE53_004334 at 511.503 kb on - strand, within ABIE53_004334 at 511.503 kb on - strand, within ABIE53_004334 at 511.503 kb on - strand, within ABIE53_004334 at 511.638 kb on + strand at 511.638 kb on + strand at 511.639 kb on - strand at 511.663 kb on + strand at 511.664 kb on - strand at 511.675 kb on + strand at 511.675 kb on + strand at 511.680 kb on + strand at 512.026 kb on + strand, within ABIE53_004335 at 512.026 kb on + strand, within ABIE53_004335 at 512.026 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.221 kb on + strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.222 kb on - strand, within ABIE53_004335 at 512.223 kb on + strand, within ABIE53_004335 at 512.223 kb on + strand, within ABIE53_004335 at 512.223 kb on + strand, within ABIE53_004335 at 512.223 kb on + strand, within ABIE53_004335 at 512.223 kb on + strand, within ABIE53_004335 at 512.223 kb on + strand, within ABIE53_004335 at 512.223 kb on + strand, within ABIE53_004335 at 512.224 kb on - strand, within ABIE53_004335 at 512.224 kb on - strand, within ABIE53_004335 at 512.224 kb on - strand, within ABIE53_004335 at 512.224 kb on - strand, within ABIE53_004335 at 512.224 kb on - strand, within ABIE53_004335 at 512.347 kb on + strand, within ABIE53_004335 at 512.347 kb on + strand, within ABIE53_004335 at 512.348 kb on - strand, within ABIE53_004335 at 512.500 kb on + strand, within ABIE53_004335 at 512.522 kb on - strand, within ABIE53_004335 at 512.527 kb on + strand, within ABIE53_004335 at 512.527 kb on + strand, within ABIE53_004335 at 512.528 kb on - strand, within ABIE53_004335 at 512.528 kb on - strand, within ABIE53_004335 at 512.528 kb on - strand, within ABIE53_004335 at 512.531 kb on - strand, within ABIE53_004335 at 512.531 kb on - strand, within ABIE53_004335 at 512.531 kb on - strand, within ABIE53_004335 at 512.571 kb on + strand at 512.652 kb on + strand at 512.652 kb on + strand at 512.652 kb on + strand at 512.652 kb on + strand at 512.652 kb on + strand at 512.652 kb on + strand at 512.653 kb on - strand at 512.653 kb on - strand at 512.653 kb on - strand at 512.655 kb on - strand at 512.666 kb on + strand at 512.666 kb on + strand at 512.666 kb on + strand at 512.666 kb on + strand at 512.666 kb on + strand at 512.667 kb on - strand at 512.667 kb on - strand at 512.667 kb on - strand at 512.667 kb on - strand at 512.667 kb on - strand at 512.667 kb on - strand at 512.667 kb on - strand at 512.667 kb on - strand at 512.672 kb on + strand at 512.790 kb on + strand, within ABIE53_004336 at 512.835 kb on + strand, within ABIE53_004336 at 512.836 kb on - strand, within ABIE53_004336 at 512.836 kb on - strand, within ABIE53_004336 at 512.836 kb on - strand, within ABIE53_004336 at 512.836 kb on - strand, within ABIE53_004336 at 512.853 kb on - strand, within ABIE53_004336 at 512.875 kb on - strand, within ABIE53_004336 at 512.913 kb on + strand, within ABIE53_004336 at 512.913 kb on + strand, within ABIE53_004336 at 512.914 kb on - strand, within ABIE53_004336 at 512.975 kb on - strand, within ABIE53_004336 at 513.046 kb on + strand at 513.046 kb on + strand at 513.046 kb on + strand at 513.046 kb on + strand at 513.047 kb on - strand at 513.047 kb on - strand at 513.047 kb on - strand at 513.136 kb on + strand at 513.136 kb on + strand at 513.136 kb on + strand at 513.137 kb on - strand at 513.140 kb on + strand at 513.140 kb on + strand at 513.140 kb on + strand at 513.140 kb on + strand at 513.141 kb on - strand at 513.178 kb on - strand, within ABIE53_004337 at 513.178 kb on - strand, within ABIE53_004337 at 513.234 kb on + strand, within ABIE53_004337 at 513.235 kb on - strand, within ABIE53_004337 at 513.447 kb on + strand, within ABIE53_004337 at 513.568 kb on - strand, within ABIE53_004337
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 510,738 + -0.3 510,738 + -0.3 510,738 + +0.7 510,738 + +1.7 510,738 + +0.7 510,739 - -0.9 510,739 - +1.0 510,739 - +0.8 510,739 - +1.7 510,739 - +1.4 510,739 - -0.1 510,744 + +1.7 510,744 + -0.7 510,744 + -0.6 510,745 - +0.5 510,750 + -1.1 510,750 + -1.0 510,751 - +0.1 510,751 - -0.2 510,791 + +1.4 510,791 + +0.6 510,791 + -0.4 510,791 + -1.0 510,791 + -1.2 510,792 - -1.0 510,792 - -0.6 510,792 - +0.6 510,792 - -2.3 510,792 - -0.4 510,830 + +1.0 510,830 + +0.3 510,830 + -2.7 510,831 - +0.7 510,831 - -0.8 510,844 + +0.7 510,845 - +0.8 510,930 + -0.8 510,930 + -1.3 510,930 + +0.7 510,930 + -0.8 510,930 + -1.8 510,930 + +1.1 510,930 + -0.7 510,931 - -0.1 510,931 - +0.7 510,931 - +0.7 510,931 - +0.4 510,931 - -0.8 510,931 - +0.9 510,931 - -0.6 511,137 + ABIE53_004334 0.37 -0.8 511,138 - ABIE53_004334 0.37 -0.4 511,138 - ABIE53_004334 0.37 +0.2 511,138 - ABIE53_004334 0.37 -0.6 511,138 - ABIE53_004334 0.37 -1.4 511,213 + ABIE53_004334 0.47 -0.0 511,214 - ABIE53_004334 0.48 -0.6 511,214 - ABIE53_004334 0.48 +0.9 511,311 - ABIE53_004334 0.61 +3.4 511,491 + ABIE53_004334 0.85 +0.1 511,491 + ABIE53_004334 0.85 -1.3 511,491 + ABIE53_004334 0.85 -0.3 511,491 + ABIE53_004334 0.85 +0.4 511,491 + ABIE53_004334 0.85 +0.7 511,491 + ABIE53_004334 0.85 -0.4 511,491 + ABIE53_004334 0.85 -0.5 511,492 - ABIE53_004334 0.85 -0.3 511,492 - ABIE53_004334 0.85 +1.2 511,492 - ABIE53_004334 0.85 -1.8 511,502 + ABIE53_004334 0.86 -0.3 511,503 - ABIE53_004334 0.86 -0.3 511,503 - ABIE53_004334 0.86 -2.3 511,503 - ABIE53_004334 0.86 -0.1 511,638 + +0.2 511,638 + +0.8 511,639 - -1.5 511,663 + +0.2 511,664 - -0.1 511,675 + +0.6 511,675 + -1.2 511,680 + +0.2 512,026 + ABIE53_004335 0.34 -0.3 512,026 + ABIE53_004335 0.34 -0.3 512,026 + ABIE53_004335 0.34 +0.3 512,221 + ABIE53_004335 0.55 +1.0 512,221 + ABIE53_004335 0.55 +1.0 512,221 + ABIE53_004335 0.55 -0.9 512,221 + ABIE53_004335 0.55 +2.2 512,221 + ABIE53_004335 0.55 +0.1 512,221 + ABIE53_004335 0.55 +0.7 512,221 + ABIE53_004335 0.55 -1.3 512,221 + ABIE53_004335 0.55 -0.9 512,222 - ABIE53_004335 0.55 -0.1 512,222 - ABIE53_004335 0.55 +0.2 512,222 - ABIE53_004335 0.55 -1.1 512,222 - ABIE53_004335 0.55 -0.3 512,222 - ABIE53_004335 0.55 +0.2 512,222 - ABIE53_004335 0.55 -0.1 512,222 - ABIE53_004335 0.55 +0.7 512,222 - ABIE53_004335 0.55 +3.2 512,222 - ABIE53_004335 0.55 +1.9 512,222 - ABIE53_004335 0.55 +0.2 512,222 - ABIE53_004335 0.55 -0.8 512,223 + ABIE53_004335 0.55 +0.7 512,223 + ABIE53_004335 0.55 +0.6 512,223 + ABIE53_004335 0.55 +0.2 512,223 + ABIE53_004335 0.55 -0.1 512,223 + ABIE53_004335 0.55 +0.8 512,223 + ABIE53_004335 0.55 +1.4 512,223 + ABIE53_004335 0.55 +0.7 512,224 - ABIE53_004335 0.56 +1.7 512,224 - ABIE53_004335 0.56 -0.6 512,224 - ABIE53_004335 0.56 +1.2 512,224 - ABIE53_004335 0.56 -1.2 512,224 - ABIE53_004335 0.56 +0.2 512,347 + ABIE53_004335 0.69 -0.7 512,347 + ABIE53_004335 0.69 +0.2 512,348 - ABIE53_004335 0.69 -0.8 512,500 + ABIE53_004335 0.85 -0.2 512,522 - ABIE53_004335 0.88 -0.3 512,527 + ABIE53_004335 0.88 +3.5 512,527 + ABIE53_004335 0.88 +2.2 512,528 - ABIE53_004335 0.88 -0.5 512,528 - ABIE53_004335 0.88 +0.2 512,528 - ABIE53_004335 0.88 +0.2 512,531 - ABIE53_004335 0.89 -0.0 512,531 - ABIE53_004335 0.89 -0.3 512,531 - ABIE53_004335 0.89 -1.3 512,571 + -1.1 512,652 + -0.8 512,652 + -0.5 512,652 + +1.2 512,652 + -0.1 512,652 + -0.9 512,652 + -0.8 512,653 - +1.2 512,653 - -0.3 512,653 - -0.3 512,655 - +0.1 512,666 + -0.1 512,666 + +2.9 512,666 + -1.0 512,666 + -2.3 512,666 + -0.8 512,667 - -0.3 512,667 - +1.5 512,667 - -0.3 512,667 - -0.1 512,667 - -0.7 512,667 - +1.0 512,667 - -2.3 512,667 - -0.8 512,672 + +0.8 512,790 + ABIE53_004336 0.28 -1.1 512,835 + ABIE53_004336 0.43 -0.8 512,836 - ABIE53_004336 0.43 +0.6 512,836 - ABIE53_004336 0.43 -0.7 512,836 - ABIE53_004336 0.43 +0.5 512,836 - ABIE53_004336 0.43 +1.2 512,853 - ABIE53_004336 0.49 +1.2 512,875 - ABIE53_004336 0.56 -0.9 512,913 + ABIE53_004336 0.68 -0.9 512,913 + ABIE53_004336 0.68 -1.2 512,914 - ABIE53_004336 0.69 -1.6 512,975 - ABIE53_004336 0.89 -1.8 513,046 + +2.7 513,046 + +0.7 513,046 + +2.2 513,046 + -0.6 513,047 - -0.3 513,047 - -2.3 513,047 - -1.6 513,136 + -0.2 513,136 + -2.6 513,136 + +0.8 513,137 - -0.9 513,140 + +0.7 513,140 + +0.2 513,140 + -1.1 513,140 + +0.7 513,141 - +0.4 513,178 - ABIE53_004337 0.13 +0.0 513,178 - ABIE53_004337 0.13 -0.7 513,234 + ABIE53_004337 0.19 -1.5 513,235 - ABIE53_004337 0.19 -2.6 513,447 + ABIE53_004337 0.42 +1.0 513,568 - ABIE53_004337 0.55 -0.3
Or see this region's nucleotide sequence