Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_001119 and ABIE53_001120 are separated by 42 nucleotides ABIE53_001120 and ABIE53_001121 are separated by 387 nucleotides ABIE53_001121 and ABIE53_001122 are separated by 52 nucleotides
ABIE53_001119: ABIE53_001119 - uncharacterized protein YbjT (DUF2867 family), at 1,243,139 to 1,244,011
_001119
ABIE53_001120: ABIE53_001120 - hypothetical protein, at 1,244,054 to 1,244,461
_001120
ABIE53_001121: ABIE53_001121 - chaperonin GroES, at 1,244,849 to 1,245,139
_001121
ABIE53_001122: ABIE53_001122 - chaperonin GroEL, at 1,245,192 to 1,246,832
_001122
Position (kb) 1244
1245
1246 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 1243.991 kb on + strand at 1243.991 kb on + strand at 1243.991 kb on + strand at 1243.991 kb on + strand at 1243.991 kb on + strand at 1243.991 kb on + strand at 1243.991 kb on + strand at 1243.992 kb on - strand at 1243.992 kb on - strand at 1243.992 kb on - strand at 1243.992 kb on - strand at 1244.026 kb on - strand at 1244.115 kb on + strand, within ABIE53_001120 at 1244.115 kb on + strand, within ABIE53_001120 at 1244.115 kb on + strand, within ABIE53_001120 at 1244.115 kb on + strand, within ABIE53_001120 at 1244.115 kb on + strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.116 kb on - strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.118 kb on + strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.119 kb on - strand, within ABIE53_001120 at 1244.195 kb on + strand, within ABIE53_001120 at 1244.195 kb on + strand, within ABIE53_001120 at 1244.195 kb on + strand, within ABIE53_001120 at 1244.196 kb on - strand, within ABIE53_001120 at 1244.196 kb on - strand, within ABIE53_001120 at 1244.196 kb on - strand, within ABIE53_001120 at 1244.196 kb on - strand, within ABIE53_001120 at 1244.357 kb on + strand, within ABIE53_001120 at 1244.357 kb on + strand, within ABIE53_001120 at 1244.358 kb on - strand, within ABIE53_001120 at 1244.358 kb on - strand, within ABIE53_001120 at 1244.358 kb on - strand, within ABIE53_001120 at 1244.391 kb on + strand, within ABIE53_001120 at 1244.391 kb on + strand, within ABIE53_001120 at 1244.391 kb on + strand, within ABIE53_001120 at 1244.392 kb on - strand, within ABIE53_001120 at 1244.392 kb on - strand, within ABIE53_001120 at 1244.392 kb on - strand, within ABIE53_001120 at 1244.392 kb on - strand, within ABIE53_001120 at 1244.394 kb on + strand, within ABIE53_001120 at 1244.395 kb on - strand, within ABIE53_001120 at 1244.459 kb on + strand at 1244.459 kb on + strand at 1244.460 kb on - strand at 1244.465 kb on + strand at 1244.465 kb on + strand at 1244.465 kb on + strand at 1244.465 kb on + strand at 1244.466 kb on - strand at 1244.466 kb on - strand at 1244.495 kb on - strand at 1244.514 kb on + strand at 1244.515 kb on - strand at 1244.515 kb on - strand at 1244.524 kb on + strand at 1244.574 kb on + strand at 1244.574 kb on + strand at 1244.574 kb on + strand at 1244.575 kb on - strand at 1244.595 kb on - strand at 1244.622 kb on + strand at 1244.622 kb on + strand at 1244.622 kb on + strand at 1244.622 kb on + strand at 1244.622 kb on + strand at 1244.622 kb on + strand at 1244.622 kb on + strand at 1244.622 kb on + strand at 1244.623 kb on - strand at 1244.623 kb on - strand at 1244.623 kb on - strand at 1244.623 kb on - strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.626 kb on + strand at 1244.627 kb on - strand at 1244.627 kb on - strand at 1244.627 kb on - strand at 1244.627 kb on - strand at 1244.627 kb on - strand at 1244.627 kb on - strand at 1244.634 kb on + strand at 1244.634 kb on + strand at 1244.634 kb on + strand at 1244.634 kb on + strand at 1244.635 kb on - strand at 1244.745 kb on + strand at 1244.745 kb on + strand at 1244.745 kb on + strand at 1244.745 kb on + strand at 1244.745 kb on + strand at 1244.747 kb on + strand at 1244.747 kb on + strand at 1244.747 kb on + strand at 1244.751 kb on + strand at 1244.751 kb on + strand at 1244.774 kb on + strand at 1244.774 kb on + strand at 1245.137 kb on + strand at 1245.155 kb on + strand at 1245.163 kb on + strand at 1245.163 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,243,991 + -0.1 1,243,991 + -0.8 1,243,991 + +2.5 1,243,991 + -0.4 1,243,991 + +0.2 1,243,991 + +0.2 1,243,991 + +0.0 1,243,992 - -1.7 1,243,992 - +1.7 1,243,992 - -1.4 1,243,992 - +0.2 1,244,026 - +0.8 1,244,115 + ABIE53_001120 0.15 +0.4 1,244,115 + ABIE53_001120 0.15 +1.2 1,244,115 + ABIE53_001120 0.15 -0.7 1,244,115 + ABIE53_001120 0.15 -0.6 1,244,115 + ABIE53_001120 0.15 -2.0 1,244,116 - ABIE53_001120 0.15 -0.6 1,244,116 - ABIE53_001120 0.15 +1.2 1,244,116 - ABIE53_001120 0.15 +0.2 1,244,116 - ABIE53_001120 0.15 -0.6 1,244,116 - ABIE53_001120 0.15 -0.6 1,244,116 - ABIE53_001120 0.15 +3.0 1,244,116 - ABIE53_001120 0.15 -1.2 1,244,116 - ABIE53_001120 0.15 +0.1 1,244,116 - ABIE53_001120 0.15 -1.2 1,244,116 - ABIE53_001120 0.15 +0.6 1,244,118 + ABIE53_001120 0.16 +0.9 1,244,118 + ABIE53_001120 0.16 -2.0 1,244,118 + ABIE53_001120 0.16 -2.3 1,244,118 + ABIE53_001120 0.16 +0.2 1,244,118 + ABIE53_001120 0.16 +3.2 1,244,118 + ABIE53_001120 0.16 +1.2 1,244,118 + ABIE53_001120 0.16 -1.6 1,244,118 + ABIE53_001120 0.16 +0.1 1,244,118 + ABIE53_001120 0.16 -0.6 1,244,118 + ABIE53_001120 0.16 -0.8 1,244,118 + ABIE53_001120 0.16 +0.7 1,244,118 + ABIE53_001120 0.16 -1.4 1,244,119 - ABIE53_001120 0.16 -0.3 1,244,119 - ABIE53_001120 0.16 +0.0 1,244,119 - ABIE53_001120 0.16 -0.6 1,244,119 - ABIE53_001120 0.16 -0.2 1,244,119 - ABIE53_001120 0.16 -1.5 1,244,119 - ABIE53_001120 0.16 +2.4 1,244,119 - ABIE53_001120 0.16 -1.0 1,244,119 - ABIE53_001120 0.16 -1.1 1,244,119 - ABIE53_001120 0.16 +0.9 1,244,119 - ABIE53_001120 0.16 +0.6 1,244,195 + ABIE53_001120 0.35 +1.1 1,244,195 + ABIE53_001120 0.35 +0.5 1,244,195 + ABIE53_001120 0.35 -0.6 1,244,196 - ABIE53_001120 0.35 +1.5 1,244,196 - ABIE53_001120 0.35 -0.2 1,244,196 - ABIE53_001120 0.35 -0.1 1,244,196 - ABIE53_001120 0.35 -0.4 1,244,357 + ABIE53_001120 0.74 -1.1 1,244,357 + ABIE53_001120 0.74 -1.8 1,244,358 - ABIE53_001120 0.75 -0.3 1,244,358 - ABIE53_001120 0.75 -2.4 1,244,358 - ABIE53_001120 0.75 +0.0 1,244,391 + ABIE53_001120 0.83 -0.9 1,244,391 + ABIE53_001120 0.83 -2.4 1,244,391 + ABIE53_001120 0.83 +0.4 1,244,392 - ABIE53_001120 0.83 +0.4 1,244,392 - ABIE53_001120 0.83 -0.3 1,244,392 - ABIE53_001120 0.83 +0.2 1,244,392 - ABIE53_001120 0.83 +0.6 1,244,394 + ABIE53_001120 0.83 -2.2 1,244,395 - ABIE53_001120 0.84 +2.6 1,244,459 + -2.0 1,244,459 + -1.6 1,244,460 - +0.1 1,244,465 + -0.2 1,244,465 + -1.5 1,244,465 + -0.0 1,244,465 + -1.9 1,244,466 - -0.8 1,244,466 - -0.5 1,244,495 - +3.0 1,244,514 + -1.5 1,244,515 - -1.5 1,244,515 - +1.7 1,244,524 + +0.6 1,244,574 + -0.8 1,244,574 + -1.7 1,244,574 + -0.6 1,244,575 - -0.2 1,244,595 - -0.8 1,244,622 + -0.6 1,244,622 + +0.6 1,244,622 + +3.9 1,244,622 + -0.1 1,244,622 + -1.9 1,244,622 + +0.4 1,244,622 + +0.8 1,244,622 + +0.6 1,244,623 - +0.3 1,244,623 - +0.6 1,244,623 - -0.5 1,244,623 - +0.9 1,244,626 + -0.9 1,244,626 + -0.2 1,244,626 + -0.4 1,244,626 + -1.6 1,244,626 + +0.0 1,244,626 + +0.5 1,244,626 + -1.0 1,244,626 + -1.5 1,244,626 + -0.1 1,244,627 - +0.3 1,244,627 - -0.3 1,244,627 - -1.0 1,244,627 - -1.1 1,244,627 - +2.2 1,244,627 - -0.5 1,244,634 + -0.9 1,244,634 + -2.1 1,244,634 + -0.7 1,244,634 + -0.6 1,244,635 - +0.6 1,244,745 + +2.0 1,244,745 + -2.3 1,244,745 + +0.2 1,244,745 + -0.4 1,244,745 + -0.2 1,244,747 + +0.6 1,244,747 + -0.7 1,244,747 + +0.4 1,244,751 + -1.5 1,244,751 + -0.1 1,244,774 + -0.2 1,244,774 + -1.4 1,245,137 + -1.2 1,245,155 + -1.7 1,245,163 + -1.1 1,245,163 + +2.2
Or see this region's nucleotide sequence