Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_000371 and ABIE53_000372 are separated by 48 nucleotides ABIE53_000372 and ABIE53_000373 are separated by 90 nucleotides ABIE53_000373 and ABIE53_000374 are separated by 75 nucleotides
ABIE53_000371: ABIE53_000371 - AraC-like DNA-binding protein, at 399,952 to 400,797
_000371
ABIE53_000372: ABIE53_000372 - threonine/homoserine/homoserine lactone efflux protein, at 400,846 to 401,433
_000372
ABIE53_000373: ABIE53_000373 - sulfur dioxygenase, at 401,524 to 402,597
_000373
ABIE53_000374: ABIE53_000374 - alkyl hydroperoxide reductase subunit AhpC, at 402,673 to 403,326
_000374
Position (kb) 401
402
403 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.562 kb on + strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.563 kb on - strand, within ABIE53_000371 at 400.639 kb on + strand, within ABIE53_000371 at 400.639 kb on + strand, within ABIE53_000371 at 400.639 kb on + strand, within ABIE53_000371 at 400.639 kb on + strand, within ABIE53_000371 at 400.639 kb on + strand, within ABIE53_000371 at 400.639 kb on + strand, within ABIE53_000371 at 400.640 kb on - strand, within ABIE53_000371 at 400.663 kb on + strand, within ABIE53_000371 at 400.664 kb on - strand, within ABIE53_000371 at 400.664 kb on - strand, within ABIE53_000371 at 400.862 kb on + strand at 400.862 kb on + strand at 400.862 kb on + strand at 400.863 kb on - strand at 400.863 kb on - strand at 400.863 kb on - strand at 400.863 kb on - strand at 400.863 kb on - strand at 400.863 kb on - strand at 400.863 kb on - strand at 400.934 kb on + strand, within ABIE53_000372 at 400.935 kb on - strand, within ABIE53_000372 at 400.935 kb on - strand, within ABIE53_000372 at 400.935 kb on - strand, within ABIE53_000372 at 400.958 kb on + strand, within ABIE53_000372 at 400.958 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.982 kb on + strand, within ABIE53_000372 at 400.983 kb on - strand, within ABIE53_000372 at 400.983 kb on - strand, within ABIE53_000372 at 400.983 kb on - strand, within ABIE53_000372 at 400.983 kb on - strand, within ABIE53_000372 at 400.983 kb on - strand, within ABIE53_000372 at 400.997 kb on + strand, within ABIE53_000372 at 400.998 kb on - strand, within ABIE53_000372 at 401.045 kb on + strand, within ABIE53_000372 at 401.045 kb on + strand, within ABIE53_000372 at 401.046 kb on - strand, within ABIE53_000372 at 401.046 kb on - strand, within ABIE53_000372 at 401.112 kb on - strand, within ABIE53_000372 at 401.178 kb on - strand, within ABIE53_000372 at 401.178 kb on - strand, within ABIE53_000372 at 401.178 kb on - strand, within ABIE53_000372 at 401.289 kb on + strand, within ABIE53_000372 at 401.446 kb on - strand at 401.500 kb on + strand at 401.500 kb on + strand at 401.501 kb on - strand at 401.501 kb on - strand at 401.516 kb on + strand at 401.516 kb on + strand at 401.516 kb on + strand at 401.516 kb on + strand at 401.516 kb on + strand at 401.517 kb on - strand at 401.517 kb on - strand at 401.517 kb on - strand at 401.517 kb on - strand at 401.518 kb on + strand at 401.518 kb on + strand at 401.518 kb on + strand at 401.519 kb on - strand at 401.519 kb on - strand at 401.519 kb on - strand at 401.519 kb on - strand at 401.519 kb on - strand at 401.525 kb on + strand at 401.526 kb on - strand at 401.526 kb on - strand at 401.526 kb on - strand at 401.526 kb on - strand at 401.526 kb on - strand at 401.788 kb on + strand, within ABIE53_000373 at 401.788 kb on + strand, within ABIE53_000373 at 401.788 kb on + strand, within ABIE53_000373 at 401.788 kb on + strand, within ABIE53_000373 at 401.789 kb on - strand, within ABIE53_000373 at 401.855 kb on + strand, within ABIE53_000373 at 401.855 kb on + strand, within ABIE53_000373 at 401.856 kb on - strand, within ABIE53_000373 at 401.856 kb on - strand, within ABIE53_000373 at 401.981 kb on + strand, within ABIE53_000373 at 401.981 kb on + strand, within ABIE53_000373 at 401.981 kb on + strand, within ABIE53_000373 at 401.982 kb on - strand, within ABIE53_000373 at 401.982 kb on - strand, within ABIE53_000373 at 402.324 kb on - strand, within ABIE53_000373 at 402.359 kb on - strand, within ABIE53_000373 at 402.437 kb on + strand, within ABIE53_000373 at 402.438 kb on + strand, within ABIE53_000373 at 402.438 kb on + strand, within ABIE53_000373 at 402.438 kb on + strand, within ABIE53_000373 at 402.438 kb on + strand, within ABIE53_000373 at 402.438 kb on + strand, within ABIE53_000373 at 402.438 kb on + strand, within ABIE53_000373 at 402.439 kb on - strand, within ABIE53_000373 at 402.439 kb on - strand, within ABIE53_000373 at 402.439 kb on - strand, within ABIE53_000373 at 402.439 kb on - strand, within ABIE53_000373 at 402.439 kb on - strand, within ABIE53_000373 at 402.439 kb on - strand, within ABIE53_000373 at 402.440 kb on + strand, within ABIE53_000373 at 402.440 kb on + strand, within ABIE53_000373 at 402.440 kb on + strand, within ABIE53_000373 at 402.441 kb on - strand, within ABIE53_000373 at 402.441 kb on - strand, within ABIE53_000373 at 402.441 kb on - strand, within ABIE53_000373 at 402.441 kb on - strand, within ABIE53_000373 at 402.548 kb on + strand at 402.548 kb on + strand at 402.548 kb on + strand at 402.548 kb on + strand at 402.548 kb on + strand at 402.548 kb on + strand at 402.548 kb on + strand at 402.548 kb on + strand at 402.549 kb on - strand at 402.549 kb on - strand at 402.549 kb on - strand at 402.549 kb on - strand at 402.549 kb on - strand at 402.549 kb on - strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.554 kb on + strand at 402.555 kb on - strand at 402.555 kb on - strand at 402.555 kb on - strand at 402.555 kb on - strand at 402.555 kb on - strand at 402.555 kb on - strand at 402.577 kb on + strand at 402.577 kb on + strand at 402.578 kb on - strand at 402.578 kb on - strand at 402.578 kb on - strand at 402.658 kb on + strand at 402.658 kb on + strand at 402.659 kb on - strand at 402.701 kb on + strand at 402.701 kb on + strand at 402.701 kb on + strand at 402.702 kb on - strand at 402.731 kb on + strand at 402.731 kb on + strand at 402.731 kb on + strand at 402.732 kb on - strand at 402.732 kb on - strand at 402.732 kb on - strand at 402.732 kb on - strand at 402.816 kb on + strand, within ABIE53_000374 at 402.816 kb on + strand, within ABIE53_000374 at 402.816 kb on + strand, within ABIE53_000374 at 402.817 kb on - strand, within ABIE53_000374 at 402.890 kb on + strand, within ABIE53_000374 at 402.891 kb on - strand, within ABIE53_000374 at 403.004 kb on + strand, within ABIE53_000374 at 403.004 kb on + strand, within ABIE53_000374 at 403.005 kb on - strand, within ABIE53_000374 at 403.005 kb on - strand, within ABIE53_000374 at 403.046 kb on + strand, within ABIE53_000374 at 403.046 kb on + strand, within ABIE53_000374 at 403.047 kb on - strand, within ABIE53_000374 at 403.047 kb on - strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.175 kb on + strand, within ABIE53_000374 at 403.176 kb on - strand, within ABIE53_000374 at 403.176 kb on - strand, within ABIE53_000374 at 403.176 kb on - strand, within ABIE53_000374 at 403.552 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 400,562 + ABIE53_000371 0.72 -1.2 400,562 + ABIE53_000371 0.72 -0.6 400,562 + ABIE53_000371 0.72 +0.4 400,562 + ABIE53_000371 0.72 +0.5 400,562 + ABIE53_000371 0.72 +0.8 400,562 + ABIE53_000371 0.72 +3.0 400,562 + ABIE53_000371 0.72 +2.2 400,562 + ABIE53_000371 0.72 -0.7 400,562 + ABIE53_000371 0.72 -0.3 400,562 + ABIE53_000371 0.72 -0.3 400,562 + ABIE53_000371 0.72 -0.4 400,562 + ABIE53_000371 0.72 +0.0 400,562 + ABIE53_000371 0.72 +3.8 400,562 + ABIE53_000371 0.72 -0.3 400,562 + ABIE53_000371 0.72 -0.8 400,562 + ABIE53_000371 0.72 +1.1 400,562 + ABIE53_000371 0.72 +0.7 400,562 + ABIE53_000371 0.72 +1.8 400,562 + ABIE53_000371 0.72 -1.4 400,563 - ABIE53_000371 0.72 -0.8 400,563 - ABIE53_000371 0.72 +1.9 400,563 - ABIE53_000371 0.72 +1.2 400,563 - ABIE53_000371 0.72 +0.9 400,563 - ABIE53_000371 0.72 -0.4 400,563 - ABIE53_000371 0.72 -0.3 400,563 - ABIE53_000371 0.72 +0.4 400,563 - ABIE53_000371 0.72 +3.1 400,563 - ABIE53_000371 0.72 +1.8 400,563 - ABIE53_000371 0.72 -2.3 400,563 - ABIE53_000371 0.72 +3.8 400,563 - ABIE53_000371 0.72 -1.2 400,563 - ABIE53_000371 0.72 -0.9 400,563 - ABIE53_000371 0.72 -0.1 400,563 - ABIE53_000371 0.72 -0.3 400,563 - ABIE53_000371 0.72 +5.2 400,639 + ABIE53_000371 0.81 -1.1 400,639 + ABIE53_000371 0.81 +0.9 400,639 + ABIE53_000371 0.81 +3.9 400,639 + ABIE53_000371 0.81 +2.2 400,639 + ABIE53_000371 0.81 +0.1 400,639 + ABIE53_000371 0.81 +0.4 400,640 - ABIE53_000371 0.81 -0.3 400,663 + ABIE53_000371 0.84 -0.9 400,664 - ABIE53_000371 0.84 +0.7 400,664 - ABIE53_000371 0.84 +3.2 400,862 + -1.3 400,862 + -0.8 400,862 + +0.9 400,863 - -1.7 400,863 - -1.5 400,863 - -0.2 400,863 - -0.6 400,863 - +0.8 400,863 - -1.6 400,863 - -0.3 400,934 + ABIE53_000372 0.15 -0.5 400,935 - ABIE53_000372 0.15 +1.0 400,935 - ABIE53_000372 0.15 +0.1 400,935 - ABIE53_000372 0.15 +0.1 400,958 + ABIE53_000372 0.19 +1.2 400,958 + ABIE53_000372 0.19 -1.8 400,982 + ABIE53_000372 0.23 +2.3 400,982 + ABIE53_000372 0.23 -0.1 400,982 + ABIE53_000372 0.23 -0.7 400,982 + ABIE53_000372 0.23 +0.7 400,982 + ABIE53_000372 0.23 +0.7 400,982 + ABIE53_000372 0.23 -0.1 400,982 + ABIE53_000372 0.23 -1.3 400,982 + ABIE53_000372 0.23 +0.9 400,982 + ABIE53_000372 0.23 -1.8 400,982 + ABIE53_000372 0.23 +0.2 400,982 + ABIE53_000372 0.23 +2.2 400,982 + ABIE53_000372 0.23 -0.9 400,983 - ABIE53_000372 0.23 +0.1 400,983 - ABIE53_000372 0.23 -0.5 400,983 - ABIE53_000372 0.23 +0.2 400,983 - ABIE53_000372 0.23 -1.7 400,983 - ABIE53_000372 0.23 -0.1 400,997 + ABIE53_000372 0.26 +0.1 400,998 - ABIE53_000372 0.26 -1.2 401,045 + ABIE53_000372 0.34 -0.9 401,045 + ABIE53_000372 0.34 -0.8 401,046 - ABIE53_000372 0.34 -1.2 401,046 - ABIE53_000372 0.34 -0.5 401,112 - ABIE53_000372 0.45 +0.2 401,178 - ABIE53_000372 0.56 +0.2 401,178 - ABIE53_000372 0.56 +0.7 401,178 - ABIE53_000372 0.56 -0.5 401,289 + ABIE53_000372 0.75 +0.2 401,446 - -0.8 401,500 + -3.5 401,500 + +0.8 401,501 - +0.8 401,501 - +1.7 401,516 + -0.8 401,516 + +0.7 401,516 + +0.7 401,516 + +0.1 401,516 + -1.8 401,517 - -0.4 401,517 - +1.5 401,517 - -0.8 401,517 - +1.2 401,518 + +0.1 401,518 + -0.9 401,518 + -1.2 401,519 - -0.2 401,519 - -0.7 401,519 - -1.0 401,519 - -1.2 401,519 - -0.7 401,525 + -0.3 401,526 - -0.1 401,526 - -0.1 401,526 - +3.0 401,526 - +0.3 401,526 - -1.2 401,788 + ABIE53_000373 0.25 -1.8 401,788 + ABIE53_000373 0.25 +0.1 401,788 + ABIE53_000373 0.25 -0.6 401,788 + ABIE53_000373 0.25 -0.5 401,789 - ABIE53_000373 0.25 +0.4 401,855 + ABIE53_000373 0.31 +1.2 401,855 + ABIE53_000373 0.31 -1.7 401,856 - ABIE53_000373 0.31 +0.1 401,856 - ABIE53_000373 0.31 -0.6 401,981 + ABIE53_000373 0.43 +1.7 401,981 + ABIE53_000373 0.43 -0.4 401,981 + ABIE53_000373 0.43 +0.9 401,982 - ABIE53_000373 0.43 +0.9 401,982 - ABIE53_000373 0.43 -0.4 402,324 - ABIE53_000373 0.74 +0.1 402,359 - ABIE53_000373 0.78 -0.7 402,437 + ABIE53_000373 0.85 -1.2 402,438 + ABIE53_000373 0.85 -0.5 402,438 + ABIE53_000373 0.85 +2.8 402,438 + ABIE53_000373 0.85 -0.6 402,438 + ABIE53_000373 0.85 +2.6 402,438 + ABIE53_000373 0.85 -0.4 402,438 + ABIE53_000373 0.85 -0.3 402,439 - ABIE53_000373 0.85 +0.9 402,439 - ABIE53_000373 0.85 -0.7 402,439 - ABIE53_000373 0.85 +1.2 402,439 - ABIE53_000373 0.85 -0.1 402,439 - ABIE53_000373 0.85 +0.2 402,439 - ABIE53_000373 0.85 -1.8 402,440 + ABIE53_000373 0.85 +1.2 402,440 + ABIE53_000373 0.85 -0.5 402,440 + ABIE53_000373 0.85 -0.3 402,441 - ABIE53_000373 0.85 +0.9 402,441 - ABIE53_000373 0.85 -0.8 402,441 - ABIE53_000373 0.85 -1.2 402,441 - ABIE53_000373 0.85 +0.7 402,548 + +1.5 402,548 + -0.2 402,548 + +2.8 402,548 + -0.6 402,548 + +0.7 402,548 + -0.8 402,548 + -2.1 402,548 + +0.0 402,549 - -1.6 402,549 - -0.7 402,549 - +1.2 402,549 - -0.1 402,549 - -0.6 402,549 - -0.3 402,554 + -0.9 402,554 + +0.9 402,554 + +0.2 402,554 + -0.3 402,554 + +0.9 402,554 + +1.5 402,554 + -1.1 402,554 + -2.6 402,554 + -2.2 402,555 - +3.5 402,555 - +0.2 402,555 - -0.6 402,555 - +0.3 402,555 - -0.4 402,555 - +1.2 402,577 + -0.6 402,577 + -1.3 402,578 - -0.9 402,578 - -1.3 402,578 - -0.6 402,658 + -0.9 402,658 + -0.8 402,659 - -0.9 402,701 + -0.1 402,701 + +1.2 402,701 + -1.2 402,702 - -1.6 402,731 + -0.8 402,731 + -0.1 402,731 + +0.6 402,732 - -0.8 402,732 - -1.1 402,732 - -0.3 402,732 - -0.8 402,816 + ABIE53_000374 0.22 -0.6 402,816 + ABIE53_000374 0.22 +0.8 402,816 + ABIE53_000374 0.22 +0.6 402,817 - ABIE53_000374 0.22 +0.5 402,890 + ABIE53_000374 0.33 +0.1 402,891 - ABIE53_000374 0.33 -0.1 403,004 + ABIE53_000374 0.51 +0.2 403,004 + ABIE53_000374 0.51 +0.1 403,005 - ABIE53_000374 0.51 +0.0 403,005 - ABIE53_000374 0.51 -0.3 403,046 + ABIE53_000374 0.57 -1.6 403,046 + ABIE53_000374 0.57 +0.4 403,047 - ABIE53_000374 0.57 +0.7 403,047 - ABIE53_000374 0.57 -0.6 403,175 + ABIE53_000374 0.77 +0.1 403,175 + ABIE53_000374 0.77 -0.1 403,175 + ABIE53_000374 0.77 -0.9 403,175 + ABIE53_000374 0.77 -0.7 403,175 + ABIE53_000374 0.77 -0.2 403,175 + ABIE53_000374 0.77 -0.3 403,175 + ABIE53_000374 0.77 +0.7 403,175 + ABIE53_000374 0.77 -0.8 403,176 - ABIE53_000374 0.77 -0.3 403,176 - ABIE53_000374 0.77 -1.4 403,176 - ABIE53_000374 0.77 -0.1 403,552 + +0.1
Or see this region's nucleotide sequence