Strain Fitness in Rahnella sp. WP5 around EX31_RS15795

Experiment: Ammonium chloride (N); RCH2 media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N); RCH2 media; no shaking
9,426	+				-0.6
9,426	+				-0.6
9,426	+				+1.3
9,426	+				-0.4
9,426	+				-2.7
9,426	+				+0.3
9,426	+				+1.0
9,426	+				+1.3
9,427	-				-0.1
9,427	-				+0.1
9,427	-				-0.6
9,427	-				-0.7
9,427	-				-0.7
9,453	+				-0.5
9,453	+				-0.3
9,454	-				+0.7
9,454	-				+0.3
9,454	-				-0.4
9,454	-				+0.1
9,497	-				+0.4
9,541	+				+0.8
9,541	+				-0.4
9,572	+				+0.9
9,573	-				+0.9
9,573	-				+0.7
9,593	-				-0.0
9,593	-				+0.2
9,597	+				+0.5
9,622	+				-0.0
9,622	+				+0.1
9,623	-				+0.5
9,623	-				+0.2
9,623	-				-0.8
9,623	-				+0.1
9,625	+				+1.2
9,626	-				+0.1
9,653	+				+0.3
9,654	-				-0.5
9,657	+				-0.0
9,658	-				+0.0
9,662	+				-0.4
9,663	-				+0.2
9,663	-				+0.0
9,663	-				+0.2
9,663	-				+1.1
9,663	-				+0.5
9,668	+				+2.6
9,679	+				+0.1
9,680	-				-0.2
9,680	-				+0.4
9,680	-				-0.6
9,680	-				+0.1
9,680	-				+0.6
9,703	+				-0.6
9,718	+				-1.1
9,719	-				-0.5
9,723	+				-0.2
9,723	+				+0.2
9,724	-				-1.1
9,774	+				+0.1
9,775	-				+0.8
9,775	-				-0.4
9,788	+				+0.4
9,788	+				+0.3
9,788	+				-0.7
9,788	+				-0.2
9,789	-				+1.3
9,789	-				-1.1
9,789	-				-0.0
9,789	-				-1.1
9,789	-				+0.5
9,790	+				-1.8
9,790	+				+0.5
9,790	+				+0.3
9,790	+				-0.1
9,790	+				-0.1
9,790	+				-0.9
9,791	-				+1.0
9,791	-				-0.9
9,791	-				-0.1
9,791	-				-1.6
9,791	-				+0.6
9,791	-				+0.1
9,791	-				-1.5
9,791	-				+1.5
9,791	-				+0.1
9,793	+				+0.3
9,794	-				+0.5
9,868	+		EX31_RS15790	0.16	+0.2
9,869	-		EX31_RS15790	0.16	+0.1
9,869	-		EX31_RS15790	0.16	+0.2
9,869	-		EX31_RS15790	0.16	-1.3
9,871	+		EX31_RS15790	0.16	-0.2
9,871	+		EX31_RS15790	0.16	+0.4
9,871	+		EX31_RS15790	0.16	-0.5
9,871	+		EX31_RS15790	0.16	+0.6
9,871	+		EX31_RS15790	0.16	-0.0
9,872	-		EX31_RS15790	0.17	+0.7
9,872	-		EX31_RS15790	0.17	+0.6
9,872	-		EX31_RS15790	0.17	+0.0
9,922	-		EX31_RS15790	0.25	+0.5
9,946	+		EX31_RS15790	0.28	-0.7
9,959	+		EX31_RS15790	0.31	-0.8
9,959	+		EX31_RS15790	0.31	-1.9
9,959	+		EX31_RS15790	0.31	+0.1
10,038	+		EX31_RS15790	0.43	-0.0
10,180	+		EX31_RS15790	0.66	-0.8
10,180	+		EX31_RS15790	0.66	-0.7
10,181	-		EX31_RS15790	0.67	+0.9
10,181	-		EX31_RS15790	0.67	+0.6
10,181	-		EX31_RS15790	0.67	-0.1
10,247	+		EX31_RS15790	0.77	+0.8
10,248	-		EX31_RS15790	0.77	+0.7
10,248	-		EX31_RS15790	0.77	+0.1
10,262	+		EX31_RS15790	0.80	+0.4
10,262	+		EX31_RS15790	0.80	+0.8
10,262	+		EX31_RS15790	0.80	-0.5
10,262	+		EX31_RS15790	0.80	+0.5
10,262	+		EX31_RS15790	0.80	+0.2
10,262	+		EX31_RS15790	0.80	+0.3
10,262	+		EX31_RS15790	0.80	-0.1
10,262	+		EX31_RS15790	0.80	+0.5
10,263	-		EX31_RS15790	0.80	+0.6
10,263	-		EX31_RS15790	0.80	+0.0
10,263	-		EX31_RS15790	0.80	-0.0
10,263	-		EX31_RS15790	0.80	+0.3
10,263	-		EX31_RS15790	0.80	+0.2
10,291	+		EX31_RS15790	0.84	+0.2
10,291	+		EX31_RS15790	0.84	+0.9
10,292	-		EX31_RS15790	0.84	+0.8
10,292	-		EX31_RS15790	0.84	-0.7
10,294	+		EX31_RS15790	0.85	-0.8
10,294	+		EX31_RS15790	0.85	-1.0
10,295	-		EX31_RS15790	0.85	-1.2
10,295	-		EX31_RS15790	0.85	+0.2
10,295	-		EX31_RS15790	0.85	+0.2
10,295	-		EX31_RS15790	0.85	-0.8
10,327	+				+0.8
10,327	+				+0.5
10,327	+				-0.6
10,328	-				+0.1
10,363	+				-0.4
10,364	-				+0.2
10,364	-				-0.0
10,364	-				-0.1
10,367	+				+0.6
10,385	+				+0.1
10,385	+				-0.3
10,386	-				-0.1
10,401	+				-0.0
10,476	+				+0.7
10,609	+		EX31_RS15795	0.12	-0.0
10,684	-		EX31_RS15795	0.16	-0.5
10,684	-		EX31_RS15795	0.16	+0.5
10,803	+		EX31_RS15795	0.23	+0.4
10,803	+		EX31_RS15795	0.23	-0.7
10,803	+		EX31_RS15795	0.23	+0.1
10,803	+		EX31_RS15795	0.23	-1.4
10,804	-		EX31_RS15795	0.23	+0.1
10,824	+		EX31_RS15795	0.24	-0.5
10,895	+		EX31_RS15795	0.29	+0.1
10,895	+		EX31_RS15795	0.29	+0.4
10,895	+		EX31_RS15795	0.29	+0.2
10,896	-		EX31_RS15795	0.29	-0.0
10,896	-		EX31_RS15795	0.29	-1.4
10,932	+		EX31_RS15795	0.31	+0.3
10,932	+		EX31_RS15795	0.31	-0.5
10,932	+		EX31_RS15795	0.31	+0.1
10,932	+		EX31_RS15795	0.31	-0.5
10,932	+		EX31_RS15795	0.31	+0.5
10,932	+		EX31_RS15795	0.31	-0.1
10,932	+		EX31_RS15795	0.31	+0.2
10,932	+		EX31_RS15795	0.31	+0.5
10,932	+		EX31_RS15795	0.31	+0.8
10,932	+		EX31_RS15795	0.31	-0.6
10,932	+		EX31_RS15795	0.31	+1.7
10,932	+		EX31_RS15795	0.31	+0.3
10,932	+		EX31_RS15795	0.31	+0.9
10,933	-		EX31_RS15795	0.31	+0.6
10,933	-		EX31_RS15795	0.31	+0.0
10,933	-		EX31_RS15795	0.31	+0.8
10,933	-		EX31_RS15795	0.31	-0.9
10,933	-		EX31_RS15795	0.31	+0.2
10,933	-		EX31_RS15795	0.31	+0.5
10,933	-		EX31_RS15795	0.31	+0.3
11,055	+		EX31_RS15795	0.38	+0.3
11,055	+		EX31_RS15795	0.38	+0.1
11,055	+		EX31_RS15795	0.38	+0.1
11,055	+		EX31_RS15795	0.38	+0.3
11,055	+		EX31_RS15795	0.38	-0.7
11,056	-		EX31_RS15795	0.38	+0.1
11,056	-		EX31_RS15795	0.38	+0.7
11,056	-		EX31_RS15795	0.38	+1.3
11,056	-		EX31_RS15795	0.38	+0.9
11,063	-		EX31_RS15795	0.39	-0.2
11,067	+		EX31_RS15795	0.39	+1.7
11,067	+		EX31_RS15795	0.39	+0.5
11,067	+		EX31_RS15795	0.39	+0.6
11,068	-		EX31_RS15795	0.39	-0.4
11,068	-		EX31_RS15795	0.39	+0.3
11,139	+		EX31_RS15795	0.43	+0.6
11,175	-		EX31_RS15795	0.45	-0.5
11,206	-		EX31_RS15795	0.47	-0.7
11,395	-		EX31_RS15795	0.58	-0.5
11,395	-		EX31_RS15795	0.58	+0.9
11,395	-		EX31_RS15795	0.58	+0.4
11,543	+		EX31_RS15795	0.67	-1.9
11,543	+		EX31_RS15795	0.67	+0.0
11,544	-		EX31_RS15795	0.67	+0.1
11,557	+		EX31_RS15795	0.68	-2.8
11,557	+		EX31_RS15795	0.68	+1.9
11,558	-		EX31_RS15795	0.68	-1.0
11,558	-		EX31_RS15795	0.68	+0.9
11,560	+		EX31_RS15795	0.68	-0.0
11,560	+		EX31_RS15795	0.68	-0.5
11,561	-		EX31_RS15795	0.68	+0.4
11,561	-		EX31_RS15795	0.68	+0.5
11,587	-		EX31_RS15795	0.69	+0.3
11,682	-		EX31_RS15795	0.75	-0.2
11,687	+		EX31_RS15795	0.75	-1.3
11,687	+		EX31_RS15795	0.75	+1.2
11,768	+		EX31_RS15795	0.80	+2.5
11,768	+		EX31_RS15795	0.80	+0.2
11,768	+		EX31_RS15795	0.80	-0.4
11,768	+		EX31_RS15795	0.80	+0.3
11,768	+		EX31_RS15795	0.80	+0.5
11,769	-		EX31_RS15795	0.80	+0.0
11,769	-		EX31_RS15795	0.80	-0.9
11,769	-		EX31_RS15795	0.80	-0.5
11,769	-		EX31_RS15795	0.80	-1.5
11,769	-		EX31_RS15795	0.80	+0.2
11,769	-		EX31_RS15795	0.80	-0.1
11,769	-		EX31_RS15795	0.80	+0.1
11,769	-		EX31_RS15795	0.80	-0.6
11,769	-		EX31_RS15795	0.80	-1.1
11,772	+		EX31_RS15795	0.80	+1.4
11,772	+		EX31_RS15795	0.80	-0.3
11,773	-		EX31_RS15795	0.80	-0.2
11,773	-		EX31_RS15795	0.80	+2.5
11,773	-		EX31_RS15795	0.80	-0.0
11,784	+		EX31_RS15795	0.81	+1.3
11,784	+		EX31_RS15795	0.81	-0.1
11,785	-		EX31_RS15795	0.81	-0.0
11,814	+		EX31_RS15795	0.83	-0.2
11,814	+		EX31_RS15795	0.83	+0.9
11,846	-		EX31_RS15795	0.85	+0.6
11,846	-		EX31_RS15795	0.85	+1.0
11,875	+		EX31_RS15795	0.86	+0.5
11,909	+		EX31_RS15795	0.88	+0.1
11,910	-		EX31_RS15795	0.88	+0.0
11,910	-		EX31_RS15795	0.88	-0.3
11,910	-		EX31_RS15795	0.88	+0.2
11,910	-		EX31_RS15795	0.88	-0.3
11,948	+				-0.5
11,948	+				+2.0
11,948	+				-0.0
11,949	-				-0.4
11,949	-				+0.2
11,949	-				-0.5
11,949	-				+1.1
12,042	+				+0.6
12,042	+				-0.7
12,042	+				+0.8
12,042	+				-1.7
12,043	-				-0.9
12,043	-				+0.2
12,043	-				-0.5
12,084	+				-0.9
12,084	+				+1.5
12,084	+				+0.3
12,085	-				+0.2
12,093	+				+0.0
12,142	-				+0.7
12,162	+				+0.5
12,162	+				+0.0
12,162	+				+0.1
12,163	-				-1.1
12,163	-				+0.1
12,163	-				+0.5
12,163	-				-0.1
12,163	-				+0.7
12,163	-				+1.0
12,163	-				-0.4
12,180	+				+1.3
12,181	-				+0.8
12,181	-				-1.8
12,181	-				-1.9
12,192	+				-0.4
12,192	+				+0.6
12,239	+				+0.1
12,239	+				+0.6
12,239	+				+0.3
12,239	+				-2.6
12,239	+				-2.5
12,240	-				-1.1
12,240	-				-0.4
12,240	-				+0.5
12,240	-				+0.1
12,240	-				-0.8
12,240	-				-0.3
12,240	-				+0.4
12,240	-				+1.8
12,240	-				+0.1
12,240	-				+0.2
12,240	-				+1.0
12,259	-				+1.0
12,286	+				+0.4
12,286	+				+0.4
12,286	+				+0.5
12,287	-				-0.6
12,287	-				-0.5
12,321	+				-0.1
12,321	+				-0.7
12,321	+				+0.2
12,321	+				+0.9
12,321	+				+0.3
12,321	+				+0.5
12,321	+				-0.3
12,323	+				-0.0
12,323	+				-0.1
12,323	+				-0.2
12,323	+				+1.1
12,323	+				+0.3
12,323	+				+2.1
12,323	+				+1.0
12,349	+				-0.7
12,349	+				-1.3
12,349	+				-0.8
12,349	+				+0.2
12,349	+				+0.2
12,356	+				+2.5
12,356	+				+0.3
13,020	+				+0.5
13,020	+				-0.1
13,023	+				-0.4
13,023	+				-0.7
13,023	+				-0.1
13,023	+				+0.5
13,052	+				+1.9
13,052	+				-1.5
13,052	+				-0.2
13,052	+				-1.2
13,052	+				-0.2
13,059	+				-1.2
13,059	+				-1.3
13,059	+				-0.9
13,059	+				-0.7
13,059	+				-2.6
13,059	+				+1.7
13,059	+				-0.7
13,059	+				-1.8
13,059	+				+0.1
13,059	+				-1.3
13,059	+				-0.6
13,059	+				+0.3
13,059	+				-0.8
13,059	+				-0.4
13,059	+				-1.1
13,059	+				-0.7
13,059	+				-0.2
13,059	+				-1.4
13,059	+				-1.0
13,059	+				+0.4
13,059	+				-1.5
13,059	+				-0.7
13,059	+				-0.3
13,059	+				-0.7
13,059	+				-0.4
13,059	+				+0.7
13,059	+				-0.9
13,059	+				-1.2
13,059	+				-0.6
13,059	+				-1.3
13,059	+				-0.7
13,059	+				-0.6
13,059	+				+0.5
13,059	+				-1.3
13,059	+				-0.7
13,059	+				+0.1
13,059	+				-1.0
13,059	+				-0.4
13,059	+				-0.6
13,059	+				-0.5
13,059	+				-1.0
13,059	+				-1.2
13,059	+				-1.2
13,059	+				-1.0
13,059	+				+0.4
13,059	+				-0.7
13,059	+				-0.8
13,059	+				-0.9
13,059	+				+0.2
13,059	+				-0.7
13,059	+				+0.0
13,059	+				+1.1
13,059	+				-0.6
13,059	+				-0.1
13,059	+				-1.5
13,059	+				-0.7
13,059	+				-1.0
13,061	+				-1.9
13,061	+				-0.5
13,061	+				-0.4
13,061	+				-1.3
13,061	+				-2.1
13,061	+				+0.5
13,061	+				-0.9
13,061	+				-3.0
13,061	+				-1.6
13,061	+				+1.7
13,061	+				+0.2
13,061	+				-0.6
13,061	+				-1.3
13,061	+				+1.2
13,061	+				+0.8
13,061	+				-1.6
13,061	+				-2.7
13,061	+				-0.5
13,061	+				-0.3
13,072	+				+0.1
13,072	+				-0.7
13,072	+				+0.2