Strain Fitness in Rahnella sp. WP5 around EX31_RS14595

Experiment: Ammonium chloride (N); RCH2 media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N); RCH2 media; no shaking
11,115	+		EX31_RS14585	0.63	-0.2
11,115	+		EX31_RS14585	0.63	-0.5
11,116	-		EX31_RS14585	0.63	+0.4
11,154	+		EX31_RS14585	0.68	-0.1
11,155	-		EX31_RS14585	0.69	+0.6
11,184	+		EX31_RS14585	0.73	+0.1
11,184	+		EX31_RS14585	0.73	-0.1
11,184	+		EX31_RS14585	0.73	+0.4
11,185	-		EX31_RS14585	0.73	-1.0
11,187	+		EX31_RS14585	0.73	+0.2
11,187	+		EX31_RS14585	0.73	+0.6
11,187	+		EX31_RS14585	0.73	+1.3
11,188	-		EX31_RS14585	0.73	-0.1
11,188	-		EX31_RS14585	0.73	+0.4
11,208	+		EX31_RS14585	0.76	-0.5
11,208	+		EX31_RS14585	0.76	+0.4
11,208	+		EX31_RS14585	0.76	+0.3
11,208	+		EX31_RS14585	0.76	+0.0
11,209	-		EX31_RS14585	0.76	+0.9
11,209	-		EX31_RS14585	0.76	-0.8
11,237	+		EX31_RS14585	0.80	-0.2
11,237	+		EX31_RS14585	0.80	-0.0
11,237	+		EX31_RS14585	0.80	-1.8
11,237	+		EX31_RS14585	0.80	+0.6
11,238	-		EX31_RS14585	0.80	+0.4
11,238	-		EX31_RS14585	0.80	+0.2
11,238	-		EX31_RS14585	0.80	-0.1
11,238	-		EX31_RS14585	0.80	-0.7
11,283	+		EX31_RS14585	0.86	+0.2
11,283	+		EX31_RS14585	0.86	+0.3
11,283	+		EX31_RS14585	0.86	-0.1
11,283	+		EX31_RS14585	0.86	+0.2
11,284	-		EX31_RS14585	0.86	+0.7
11,284	-		EX31_RS14585	0.86	-0.1
11,285	-		EX31_RS14585	0.87	-0.2
11,301	+		EX31_RS14585	0.89	+0.7
11,333	-				-0.1
11,369	-				+1.7
11,402	+				+0.8
11,403	-				-1.1
11,408	+				+1.0
11,408	+				+0.7
11,408	+				-0.5
11,408	+				+0.6
11,408	+				+0.1
11,409	-				+0.1
11,409	-				-0.3
11,409	-				-1.4
11,411	+				-0.9
11,411	+				-0.3
11,412	-				-1.7
11,412	-				-0.4
11,412	-				+0.4
11,412	-				+0.3
11,442	-				-0.1
11,444	+				-0.5
11,444	+				+0.0
11,445	-				+0.3
11,445	-				-0.2
11,445	-				-0.8
11,481	+				-0.4
11,481	+				-0.1
11,482	-				+0.7
11,482	-				-0.4
11,482	-				+0.2
11,482	-				+1.0
11,498	+				-0.7
11,519	+				+0.0
11,520	-				-0.4
11,542	+				-0.3
11,542	+				-0.3
11,542	+				+0.0
11,542	+				-0.9
11,543	-				-1.4
11,543	-				+0.7
11,543	-				-0.3
11,543	-				+0.8
11,543	-				-0.5
11,554	+				-0.1
11,571	+		EX31_RS14590	0.12	+0.3
11,571	+		EX31_RS14590	0.12	-1.1
11,571	+		EX31_RS14590	0.12	-0.3
11,571	+		EX31_RS14590	0.12	-0.2
11,571	+		EX31_RS14590	0.12	-1.9
11,571	+		EX31_RS14590	0.12	+0.5
11,571	+		EX31_RS14590	0.12	-0.1
11,572	-		EX31_RS14590	0.13	+0.1
11,572	-		EX31_RS14590	0.13	+1.2
11,572	-		EX31_RS14590	0.13	-0.1
11,572	-		EX31_RS14590	0.13	+1.1
11,572	-		EX31_RS14590	0.13	+0.5
11,572	-		EX31_RS14590	0.13	-0.3
11,572	-		EX31_RS14590	0.13	+0.3
11,572	-		EX31_RS14590	0.13	-0.3
11,572	-		EX31_RS14590	0.13	-0.2
11,572	-		EX31_RS14590	0.13	+0.3
11,572	-		EX31_RS14590	0.13	-1.1
11,576	+		EX31_RS14590	0.13	+1.4
11,576	+		EX31_RS14590	0.13	-0.3
11,577	-		EX31_RS14590	0.14	+0.6
11,714	+		EX31_RS14590	0.39	-0.9
11,714	+		EX31_RS14590	0.39	-0.9
11,714	+		EX31_RS14590	0.39	-1.2
11,714	+		EX31_RS14590	0.39	-0.8
11,715	-		EX31_RS14590	0.39	+0.2
11,715	-		EX31_RS14590	0.39	-0.3
11,715	-		EX31_RS14590	0.39	-0.6
11,715	-		EX31_RS14590	0.39	+1.7
11,715	-		EX31_RS14590	0.39	+0.6
11,715	-		EX31_RS14590	0.39	+0.8
11,715	-		EX31_RS14590	0.39	+1.2
11,715	-		EX31_RS14590	0.39	-0.5
11,749	+		EX31_RS14590	0.45	-0.2
11,750	-		EX31_RS14590	0.46	+0.1
11,750	-		EX31_RS14590	0.46	+0.2
11,879	-		EX31_RS14590	0.69	-1.0
11,885	+		EX31_RS14590	0.71	-0.1
11,885	+		EX31_RS14590	0.71	+0.5
11,886	-		EX31_RS14590	0.71	+0.6
11,886	-		EX31_RS14590	0.71	-0.4
11,942	+		EX31_RS14590	0.81	-1.7
11,942	+		EX31_RS14590	0.81	-0.4
11,942	+		EX31_RS14590	0.81	+1.1
11,942	+		EX31_RS14590	0.81	+0.3
11,943	-		EX31_RS14590	0.81	-0.7
11,983	+		EX31_RS14590	0.89	-0.0
12,014	-				+1.1
12,061	+				-0.4
12,061	+				+0.7
12,061	+				-1.1
12,061	+				-0.3
12,094	+				+0.3
12,094	+				+2.4
12,095	-				+1.5
12,095	-				-0.4
12,095	-				-0.4
12,134	+				-0.3
12,155	+				-1.2
12,155	+				+0.6
12,155	+				-0.1
12,209	+		EX31_RS14595	0.13	-0.3
12,209	+		EX31_RS14595	0.13	+1.3
12,273	+		EX31_RS14595	0.21	-1.2
12,273	+		EX31_RS14595	0.21	-0.9
12,273	+		EX31_RS14595	0.21	-2.6
12,274	-		EX31_RS14595	0.21	+0.9
12,274	-		EX31_RS14595	0.21	-2.3
12,277	+		EX31_RS14595	0.22	+0.3
12,277	+		EX31_RS14595	0.22	-0.0
12,277	+		EX31_RS14595	0.22	+0.3
12,278	-		EX31_RS14595	0.22	-0.5
12,278	-		EX31_RS14595	0.22	+0.6
12,278	-		EX31_RS14595	0.22	-0.0
12,278	-		EX31_RS14595	0.22	+0.8
12,278	-		EX31_RS14595	0.22	+0.3
12,300	+		EX31_RS14595	0.25	-0.5
12,336	+		EX31_RS14595	0.29	-0.5
12,336	+		EX31_RS14595	0.29	-0.4
12,336	+		EX31_RS14595	0.29	-0.7
12,378	-		EX31_RS14595	0.34	+0.8
12,399	+		EX31_RS14595	0.37	+0.5
12,399	+		EX31_RS14595	0.37	-2.1
12,399	+		EX31_RS14595	0.37	+1.4
12,400	-		EX31_RS14595	0.37	-0.2
12,400	-		EX31_RS14595	0.37	+0.6
12,400	-		EX31_RS14595	0.37	-0.1
12,403	+		EX31_RS14595	0.38	+0.5
12,403	+		EX31_RS14595	0.38	-0.3
12,403	+		EX31_RS14595	0.38	+1.1
12,403	+		EX31_RS14595	0.38	+1.5
12,403	+		EX31_RS14595	0.38	+2.1
12,403	+		EX31_RS14595	0.38	-0.2
12,403	+		EX31_RS14595	0.38	-0.8
12,403	+		EX31_RS14595	0.38	+0.2
12,403	+		EX31_RS14595	0.38	+0.3
12,403	+		EX31_RS14595	0.38	+0.4
12,403	+		EX31_RS14595	0.38	-0.2
12,404	-		EX31_RS14595	0.38	+1.0
12,404	-		EX31_RS14595	0.38	+0.1
12,404	-		EX31_RS14595	0.38	-0.3
12,404	-		EX31_RS14595	0.38	+0.5
12,404	-		EX31_RS14595	0.38	+0.1
12,404	-		EX31_RS14595	0.38	+0.5
12,404	-		EX31_RS14595	0.38	+0.1
12,404	-		EX31_RS14595	0.38	+0.4
12,534	+		EX31_RS14595	0.54	-0.5
12,534	+		EX31_RS14595	0.54	-0.1
12,534	+		EX31_RS14595	0.54	+0.3
12,534	+		EX31_RS14595	0.54	-0.0
12,855	-				-1.0
12,855	-				+0.1
12,879	+				-1.9
12,879	+				-1.0
12,879	+				-0.9
12,879	+				+0.5
12,879	+				+0.8
12,879	+				+0.4
12,880	-				+1.0
12,880	-				+0.1
12,880	-				-1.8
12,880	-				-0.4
12,880	-				-1.8
12,937	+				+0.1
12,937	+				+1.0
12,937	+				-0.3
12,937	+				-0.3
12,937	+				+1.1
12,937	+				+0.1
12,937	+				-0.3
12,938	-				+0.6
12,938	-				+1.7
12,938	-				+0.6
12,938	-				-0.8
12,938	-				+0.3
12,941	+				-0.5
12,941	+				+0.2
12,941	+				+0.5
12,941	+				-0.2
12,941	+				-0.2
12,941	+				-0.3
12,941	+				-2.2
12,941	+				+0.1
12,941	+				+0.2
12,941	+				+0.4
12,941	+				-0.8
12,941	+				+1.0
12,941	+				+0.1
12,941	+				+1.3
12,941	+				-0.8
12,941	+				+0.1
12,941	+				-1.8
12,941	+				-0.3
12,942	-				+0.2
12,942	-				-0.9
12,942	-				+0.4
12,942	-				+0.7
12,942	-				+0.2
12,942	-				+0.7
12,942	-				-0.2
12,942	-				-1.6
12,942	-				-0.1
12,942	-				+1.1
12,942	-				-0.2
12,942	-				+0.7
12,942	-				+0.4
12,942	-				-0.1
12,942	-				-1.0
12,942	-				+0.4
12,943	+				+0.7
12,959	-				+0.6
12,959	-				+0.1
13,018	+				-0.8
13,019	-				-0.3
13,057	+		EX31_RS14600	0.13	+0.5
13,057	+		EX31_RS14600	0.13	-0.4
13,058	-		EX31_RS14600	0.13	+1.4
13,058	-		EX31_RS14600	0.13	+0.1
13,141	+		EX31_RS14600	0.24	-0.5
13,141	+		EX31_RS14600	0.24	+0.6
13,142	-		EX31_RS14600	0.24	-1.8
13,142	-		EX31_RS14600	0.24	+0.7
13,264	+		EX31_RS14600	0.40	-0.3
13,264	+		EX31_RS14600	0.40	-0.3
13,265	-		EX31_RS14600	0.40	-0.5
13,265	-		EX31_RS14600	0.40	-0.3
13,265	-		EX31_RS14600	0.40	-0.8
13,284	+		EX31_RS14600	0.43	-0.8
13,285	-		EX31_RS14600	0.43	-0.6
13,370	-		EX31_RS14600	0.54	+1.1
13,511	+		EX31_RS14600	0.72	+0.4
13,517	+		EX31_RS14600	0.73	-0.8
13,600	+		EX31_RS14600	0.84	-0.0
13,601	-		EX31_RS14600	0.84	+0.6
13,601	-		EX31_RS14600	0.84	+0.8
13,601	-		EX31_RS14600	0.84	-1.6
13,618	+		EX31_RS14600	0.86	-0.6
13,644	-		EX31_RS14600	0.89	+0.3
13,653	-				+0.3
13,653	-				+0.6
13,653	-				+0.2
13,653	-				+0.7
13,662	+				+1.0
13,662	+				-1.1
13,663	-				-0.3
13,697	+				-0.2
13,709	+				-0.0
13,895	-		EX31_RS14605	0.26	-0.1
13,895	-		EX31_RS14605	0.26	+1.2