Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_3786

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_3785 and Ac3H11_3786 are separated by 41 nucleotidesAc3H11_3786 and Ac3H11_3787 are separated by 3 nucleotides Ac3H11_3785 - Nucleoside-diphosphate-sugar epimerases, at 31,625 to 32,608 _3785 Ac3H11_3786 - hypothetical protein, at 32,650 to 32,916 _3786 Ac3H11_3787 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 32,920 to 33,972 _3787 Position (kb) 32 33Strain fitness (log2 ratio) -2 -1 0 1 2 3at 31.650 kb on - strandat 31.834 kb on - strand, within Ac3H11_3785at 31.857 kb on + strand, within Ac3H11_3785at 31.858 kb on - strand, within Ac3H11_3785at 31.858 kb on - strand, within Ac3H11_3785at 32.055 kb on + strand, within Ac3H11_3785at 32.056 kb on - strand, within Ac3H11_3785at 32.056 kb on - strand, within Ac3H11_3785at 32.056 kb on - strand, within Ac3H11_3785at 32.056 kb on - strand, within Ac3H11_3785at 32.056 kb on - strand, within Ac3H11_3785at 32.056 kb on - strand, within Ac3H11_3785at 32.205 kb on + strand, within Ac3H11_3785at 32.206 kb on - strand, within Ac3H11_3785at 32.206 kb on - strand, within Ac3H11_3785at 32.206 kb on - strand, within Ac3H11_3785at 32.227 kb on - strand, within Ac3H11_3785at 32.227 kb on - strand, within Ac3H11_3785at 32.227 kb on - strand, within Ac3H11_3785at 32.608 kb on + strandat 32.608 kb on + strandat 32.608 kb on + strandat 32.608 kb on + strandat 32.609 kb on - strandat 32.609 kb on - strandat 32.609 kb on - strandat 32.619 kb on + strandat 32.619 kb on + strandat 32.619 kb on + strandat 32.620 kb on - strandat 32.652 kb on - strandat 32.652 kb on - strandat 32.839 kb on + strand, within Ac3H11_3786at 32.839 kb on + strand, within Ac3H11_3786at 32.840 kb on - strand, within Ac3H11_3786at 32.840 kb on - strand, within Ac3H11_3786at 32.840 kb on - strand, within Ac3H11_3786at 32.850 kb on + strand, within Ac3H11_3786at 32.850 kb on + strand, within Ac3H11_3786at 32.850 kb on + strand, within Ac3H11_3786at 32.851 kb on - strand, within Ac3H11_3786at 32.851 kb on - strand, within Ac3H11_3786at 32.851 kb on - strand, within Ac3H11_3786at 32.851 kb on - strand, within Ac3H11_3786at 32.851 kb on - strand, within Ac3H11_3786at 32.851 kb on - strand, within Ac3H11_3786at 32.851 kb on - strand, within Ac3H11_3786at 32.863 kb on + strand, within Ac3H11_3786at 32.863 kb on + strand, within Ac3H11_3786at 32.864 kb on - strand, within Ac3H11_3786at 32.864 kb on - strand, within Ac3H11_3786at 32.864 kb on - strand, within Ac3H11_3786at 32.892 kb on + strandat 32.892 kb on + strandat 32.892 kb on + strandat 32.893 kb on - strandat 32.893 kb on - strandat 32.893 kb on - strandat 32.911 kb on - strandat 33.037 kb on + strand, within Ac3H11_3787at 33.227 kb on - strand, within Ac3H11_3787at 33.343 kb on + strand, within Ac3H11_3787at 33.382 kb on + strand, within Ac3H11_3787at 33.656 kb on - strand, within Ac3H11_3787at 33.656 kb on - strand, within Ac3H11_3787at 33.685 kb on + strand, within Ac3H11_3787at 33.685 kb on + strand, within Ac3H11_3787at 33.685 kb on + strand, within Ac3H11_3787at 33.685 kb on + strand, within Ac3H11_3787at 33.685 kb on + strand, within Ac3H11_3787at 33.685 kb on + strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.686 kb on - strand, within Ac3H11_3787at 33.736 kb on + strand, within Ac3H11_3787at 33.736 kb on + strand, within Ac3H11_3787at 33.736 kb on + strand, within Ac3H11_3787at 33.737 kb on - strand, within Ac3H11_3787at 33.737 kb on - strand, within Ac3H11_3787at 33.847 kb on + strand, within Ac3H11_3787at 33.847 kb on + strand, within Ac3H11_3787at 33.847 kb on + strand, within Ac3H11_3787at 33.847 kb on + strand, within Ac3H11_3787at 33.847 kb on + strand, within Ac3H11_3787at 33.847 kb on + strand, within Ac3H11_3787at 33.848 kb on - strand, within Ac3H11_3787at 33.848 kb on - strand, within Ac3H11_3787at 33.848 kb on - strand, within Ac3H11_3787at 33.848 kb on - strand, within Ac3H11_3787at 33.848 kb on - strand, within Ac3H11_3787at 33.848 kb on - strand, within Ac3H11_3787at 33.892 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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31,650 - -0.5
31,834 - Ac3H11_3785 0.21 -0.3
31,857 + Ac3H11_3785 0.24 -0.1
31,858 - Ac3H11_3785 0.24 +0.6
31,858 - Ac3H11_3785 0.24 -0.0
32,055 + Ac3H11_3785 0.44 -0.2
32,056 - Ac3H11_3785 0.44 +0.2
32,056 - Ac3H11_3785 0.44 -0.5
32,056 - Ac3H11_3785 0.44 +1.2
32,056 - Ac3H11_3785 0.44 +0.6
32,056 - Ac3H11_3785 0.44 +0.4
32,056 - Ac3H11_3785 0.44 +0.0
32,205 + Ac3H11_3785 0.59 -0.4
32,206 - Ac3H11_3785 0.59 -1.1
32,206 - Ac3H11_3785 0.59 -0.0
32,206 - Ac3H11_3785 0.59 -0.5
32,227 - Ac3H11_3785 0.61 -0.1
32,227 - Ac3H11_3785 0.61 -1.0
32,227 - Ac3H11_3785 0.61 -0.2
32,608 + -0.2
32,608 + +0.1
32,608 + -1.3
32,608 + -1.1
32,609 - -0.6
32,609 - -0.8
32,609 - +3.0
32,619 + +0.4
32,619 + -0.6
32,619 + +0.7
32,620 - -0.9
32,652 - -0.7
32,652 - -1.0
32,839 + Ac3H11_3786 0.71 +0.9
32,839 + Ac3H11_3786 0.71 -0.2
32,840 - Ac3H11_3786 0.71 +0.1
32,840 - Ac3H11_3786 0.71 -0.8
32,840 - Ac3H11_3786 0.71 -0.3
32,850 + Ac3H11_3786 0.75 +0.3
32,850 + Ac3H11_3786 0.75 -0.7
32,850 + Ac3H11_3786 0.75 -0.2
32,851 - Ac3H11_3786 0.75 -0.2
32,851 - Ac3H11_3786 0.75 -0.1
32,851 - Ac3H11_3786 0.75 +0.5
32,851 - Ac3H11_3786 0.75 -0.0
32,851 - Ac3H11_3786 0.75 +0.4
32,851 - Ac3H11_3786 0.75 -0.5
32,851 - Ac3H11_3786 0.75 -1.0
32,863 + Ac3H11_3786 0.80 -0.4
32,863 + Ac3H11_3786 0.80 -0.0
32,864 - Ac3H11_3786 0.80 -1.1
32,864 - Ac3H11_3786 0.80 +1.5
32,864 - Ac3H11_3786 0.80 -1.0
32,892 + +1.3
32,892 + -0.4
32,892 + -0.3
32,893 - +1.4
32,893 - -0.5
32,893 - -0.5
32,911 - -0.4
33,037 + Ac3H11_3787 0.11 -0.3
33,227 - Ac3H11_3787 0.29 -0.7
33,343 + Ac3H11_3787 0.40 -0.3
33,382 + Ac3H11_3787 0.44 +0.6
33,656 - Ac3H11_3787 0.70 +0.2
33,656 - Ac3H11_3787 0.70 -0.4
33,685 + Ac3H11_3787 0.73 -1.6
33,685 + Ac3H11_3787 0.73 +0.3
33,685 + Ac3H11_3787 0.73 -1.3
33,685 + Ac3H11_3787 0.73 +0.1
33,685 + Ac3H11_3787 0.73 -0.1
33,685 + Ac3H11_3787 0.73 -0.5
33,686 - Ac3H11_3787 0.73 +0.4
33,686 - Ac3H11_3787 0.73 -0.8
33,686 - Ac3H11_3787 0.73 -1.8
33,686 - Ac3H11_3787 0.73 +0.2
33,686 - Ac3H11_3787 0.73 -0.4
33,686 - Ac3H11_3787 0.73 +0.5
33,686 - Ac3H11_3787 0.73 -0.3
33,686 - Ac3H11_3787 0.73 -0.2
33,686 - Ac3H11_3787 0.73 -0.3
33,686 - Ac3H11_3787 0.73 -1.0
33,736 + Ac3H11_3787 0.77 +0.4
33,736 + Ac3H11_3787 0.77 -0.4
33,736 + Ac3H11_3787 0.77 -0.4
33,737 - Ac3H11_3787 0.78 -0.5
33,737 - Ac3H11_3787 0.78 -1.4
33,847 + Ac3H11_3787 0.88 -0.5
33,847 + Ac3H11_3787 0.88 -0.9
33,847 + Ac3H11_3787 0.88 -0.8
33,847 + Ac3H11_3787 0.88 -0.2
33,847 + Ac3H11_3787 0.88 -0.4
33,847 + Ac3H11_3787 0.88 -0.6
33,848 - Ac3H11_3787 0.88 -1.3
33,848 - Ac3H11_3787 0.88 -0.0
33,848 - Ac3H11_3787 0.88 -0.8
33,848 - Ac3H11_3787 0.88 -1.2
33,848 - Ac3H11_3787 0.88 -0.3
33,848 - Ac3H11_3787 0.88 -0.3
33,892 + -1.3

Or see this region's nucleotide sequence