Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18300 and AO353_18305 are separated by 193 nucleotides AO353_18305 and AO353_18310 are separated by 68 nucleotides
AO353_18300: AO353_18300 - mechanosensitive ion channel protein MscS, at 4,033,965 to 4,035,263
_18300
AO353_18305: AO353_18305 - RNA helicase, at 4,035,457 to 4,036,803
_18305
AO353_18310: AO353_18310 - hypothetical protein, at 4,036,872 to 4,038,212
_18310
Position (kb)
4035
4036
4037 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4034.568 kb on + strand, within AO353_18300 at 4034.649 kb on + strand, within AO353_18300 at 4034.707 kb on + strand, within AO353_18300 at 4034.707 kb on + strand, within AO353_18300 at 4034.707 kb on + strand, within AO353_18300 at 4034.707 kb on + strand, within AO353_18300 at 4034.708 kb on - strand, within AO353_18300 at 4034.708 kb on - strand, within AO353_18300 at 4034.708 kb on - strand, within AO353_18300 at 4034.836 kb on + strand, within AO353_18300 at 4034.836 kb on + strand, within AO353_18300 at 4034.837 kb on - strand, within AO353_18300 at 4034.837 kb on - strand, within AO353_18300 at 4034.837 kb on - strand, within AO353_18300 at 4034.837 kb on - strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.878 kb on + strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4034.879 kb on - strand, within AO353_18300 at 4035.130 kb on + strand, within AO353_18300 at 4035.131 kb on - strand, within AO353_18300 at 4035.131 kb on - strand, within AO353_18300 at 4035.131 kb on - strand, within AO353_18300 at 4035.131 kb on - strand, within AO353_18300 at 4035.269 kb on - strand at 4035.303 kb on + strand at 4035.304 kb on - strand at 4035.304 kb on - strand at 4035.312 kb on + strand at 4035.312 kb on + strand at 4035.313 kb on - strand at 4035.313 kb on - strand at 4035.313 kb on - strand at 4035.327 kb on + strand at 4035.328 kb on - strand at 4035.418 kb on + strand at 4035.418 kb on + strand at 4035.419 kb on - strand at 4035.437 kb on - strand at 4035.449 kb on + strand at 4035.450 kb on - strand at 4035.953 kb on + strand, within AO353_18305 at 4036.230 kb on + strand, within AO353_18305 at 4036.436 kb on - strand, within AO353_18305 at 4036.588 kb on + strand, within AO353_18305 at 4036.589 kb on - strand, within AO353_18305 at 4036.589 kb on - strand, within AO353_18305 at 4036.589 kb on - strand, within AO353_18305 at 4036.852 kb on - strand at 4036.852 kb on - strand at 4036.863 kb on - strand at 4036.863 kb on - strand at 4036.902 kb on + strand at 4036.902 kb on + strand at 4036.902 kb on + strand at 4036.902 kb on + strand at 4036.902 kb on + strand at 4036.902 kb on + strand at 4036.903 kb on - strand at 4036.903 kb on - strand at 4036.903 kb on - strand at 4036.903 kb on - strand at 4036.903 kb on - strand at 4036.972 kb on + strand at 4036.972 kb on + strand at 4036.973 kb on - strand at 4036.973 kb on - strand at 4036.973 kb on - strand at 4037.068 kb on + strand, within AO353_18310 at 4037.068 kb on + strand, within AO353_18310 at 4037.069 kb on - strand, within AO353_18310 at 4037.069 kb on - strand, within AO353_18310 at 4037.069 kb on - strand, within AO353_18310 at 4037.069 kb on - strand, within AO353_18310 at 4037.069 kb on - strand, within AO353_18310 at 4037.069 kb on - strand, within AO353_18310 at 4037.329 kb on + strand, within AO353_18310 at 4037.329 kb on + strand, within AO353_18310 at 4037.641 kb on - strand, within AO353_18310 at 4037.641 kb on - strand, within AO353_18310 at 4037.641 kb on - strand, within AO353_18310 at 4037.641 kb on - strand, within AO353_18310 at 4037.641 kb on - strand, within AO353_18310 at 4037.641 kb on - strand, within AO353_18310 at 4037.649 kb on + strand, within AO353_18310 at 4037.649 kb on + strand, within AO353_18310 at 4037.650 kb on - strand, within AO353_18310 at 4037.650 kb on - strand, within AO353_18310 at 4037.650 kb on - strand, within AO353_18310 at 4037.650 kb on - strand, within AO353_18310 at 4037.725 kb on - strand, within AO353_18310 at 4037.766 kb on + strand, within AO353_18310 at 4037.766 kb on + strand, within AO353_18310 at 4037.767 kb on - strand, within AO353_18310 at 4037.767 kb on - strand, within AO353_18310 at 4037.767 kb on - strand, within AO353_18310 at 4037.769 kb on + strand, within AO353_18310 at 4037.769 kb on + strand, within AO353_18310 at 4037.770 kb on - strand, within AO353_18310 at 4037.770 kb on - strand, within AO353_18310 at 4037.782 kb on - strand, within AO353_18310 at 4037.782 kb on - strand, within AO353_18310 at 4037.795 kb on + strand, within AO353_18310 at 4037.795 kb on + strand, within AO353_18310 at 4037.795 kb on + strand, within AO353_18310 at 4037.796 kb on - strand, within AO353_18310 at 4037.796 kb on - strand, within AO353_18310
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 4,034,568 + AO353_18300 0.46 +0.5 4,034,649 + AO353_18300 0.53 +0.0 4,034,707 + AO353_18300 0.57 -0.3 4,034,707 + AO353_18300 0.57 +1.1 4,034,707 + AO353_18300 0.57 -0.6 4,034,707 + AO353_18300 0.57 -0.5 4,034,708 - AO353_18300 0.57 +0.6 4,034,708 - AO353_18300 0.57 +0.2 4,034,708 - AO353_18300 0.57 +0.1 4,034,836 + AO353_18300 0.67 +1.4 4,034,836 + AO353_18300 0.67 -2.1 4,034,837 - AO353_18300 0.67 -0.8 4,034,837 - AO353_18300 0.67 -0.2 4,034,837 - AO353_18300 0.67 +0.9 4,034,837 - AO353_18300 0.67 +0.2 4,034,878 + AO353_18300 0.70 +0.2 4,034,878 + +0.6 4,034,878 + AO353_18300 0.70 +0.4 4,034,878 + AO353_18300 0.70 +0.5 4,034,878 + AO353_18300 0.70 +1.0 4,034,878 + AO353_18300 0.70 -1.9 4,034,878 + AO353_18300 0.70 -0.3 4,034,878 + AO353_18300 0.70 -0.5 4,034,878 + AO353_18300 0.70 +0.5 4,034,878 + AO353_18300 0.70 -0.6 4,034,879 - AO353_18300 0.70 +1.4 4,034,879 - AO353_18300 0.70 +0.6 4,034,879 - AO353_18300 0.70 -0.2 4,034,879 - +0.9 4,034,879 - AO353_18300 0.70 +1.8 4,034,879 - AO353_18300 0.70 -0.5 4,034,879 - AO353_18300 0.70 -0.6 4,034,879 - AO353_18300 0.70 +1.2 4,034,879 - AO353_18300 0.70 -0.7 4,034,879 - AO353_18300 0.70 +0.5 4,034,879 - AO353_18300 0.70 +0.8 4,034,879 - AO353_18300 0.70 -1.5 4,034,879 - AO353_18300 0.70 +0.7 4,034,879 - AO353_18300 0.70 -2.0 4,034,879 - AO353_18300 0.70 +0.3 4,034,879 - AO353_18300 0.70 -0.8 4,034,879 - AO353_18300 0.70 -0.8 4,034,879 - AO353_18300 0.70 +0.0 4,035,130 + AO353_18300 0.90 -0.5 4,035,131 - AO353_18300 0.90 +0.9 4,035,131 - AO353_18300 0.90 +0.6 4,035,131 - AO353_18300 0.90 +0.7 4,035,131 - AO353_18300 0.90 +0.3 4,035,269 - -0.4 4,035,303 + +0.1 4,035,304 - -0.1 4,035,304 - +0.5 4,035,312 + +0.6 4,035,312 + -0.8 4,035,313 - -1.5 4,035,313 - -1.2 4,035,313 - -1.4 4,035,327 + +1.5 4,035,328 - +0.5 4,035,418 + -0.6 4,035,418 + +0.8 4,035,419 - -0.5 4,035,437 - -1.5 4,035,449 + -0.4 4,035,450 - -2.0 4,035,953 + AO353_18305 0.37 -1.9 4,036,230 + AO353_18305 0.57 +0.4 4,036,436 - AO353_18305 0.73 -0.7 4,036,588 + AO353_18305 0.84 -1.1 4,036,589 - AO353_18305 0.84 -0.7 4,036,589 - AO353_18305 0.84 -2.0 4,036,589 - AO353_18305 0.84 -1.4 4,036,852 - -0.1 4,036,852 - +2.2 4,036,863 - +0.6 4,036,863 - +0.0 4,036,902 + -0.2 4,036,902 + +0.8 4,036,902 + +0.6 4,036,902 + -0.9 4,036,902 + +0.3 4,036,902 + +1.1 4,036,903 - +0.0 4,036,903 - +0.0 4,036,903 - -1.0 4,036,903 - +0.4 4,036,903 - +1.3 4,036,972 + +1.7 4,036,972 + +0.1 4,036,973 - +0.4 4,036,973 - -1.4 4,036,973 - +0.2 4,037,068 + AO353_18310 0.15 -0.6 4,037,068 + AO353_18310 0.15 -0.3 4,037,069 - AO353_18310 0.15 -1.2 4,037,069 - AO353_18310 0.15 -0.9 4,037,069 - AO353_18310 0.15 -0.1 4,037,069 - AO353_18310 0.15 -0.0 4,037,069 - AO353_18310 0.15 -1.0 4,037,069 - AO353_18310 0.15 -0.6 4,037,329 + AO353_18310 0.34 +0.1 4,037,329 + AO353_18310 0.34 -1.5 4,037,641 - AO353_18310 0.57 +0.8 4,037,641 - AO353_18310 0.57 -1.8 4,037,641 - AO353_18310 0.57 -1.1 4,037,641 - AO353_18310 0.57 +1.2 4,037,641 - AO353_18310 0.57 +0.1 4,037,641 - AO353_18310 0.57 -0.2 4,037,649 + AO353_18310 0.58 +0.1 4,037,649 + AO353_18310 0.58 +0.0 4,037,650 - AO353_18310 0.58 -1.4 4,037,650 - AO353_18310 0.58 +0.9 4,037,650 - AO353_18310 0.58 -1.5 4,037,650 - AO353_18310 0.58 +0.5 4,037,725 - AO353_18310 0.64 -0.2 4,037,766 + AO353_18310 0.67 -1.8 4,037,766 + AO353_18310 0.67 +2.5 4,037,767 - AO353_18310 0.67 -0.5 4,037,767 - AO353_18310 0.67 +0.0 4,037,767 - AO353_18310 0.67 -0.1 4,037,769 + AO353_18310 0.67 -0.4 4,037,769 + AO353_18310 0.67 -0.6 4,037,770 - AO353_18310 0.67 +1.1 4,037,770 - AO353_18310 0.67 +0.4 4,037,782 - AO353_18310 0.68 -0.9 4,037,782 - AO353_18310 0.68 -2.4 4,037,795 + AO353_18310 0.69 +0.3 4,037,795 + AO353_18310 0.69 +0.5 4,037,795 + AO353_18310 0.69 +0.8 4,037,796 - AO353_18310 0.69 -1.2 4,037,796 - AO353_18310 0.69 +1.9
Or see this region's nucleotide sequence