Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18225 and AO353_18230 are separated by 395 nucleotides AO353_18230 and AO353_18235 are separated by 54 nucleotides AO353_18235 and AO353_18240 overlap by 7 nucleotides AO353_18240 and AO353_18245 are separated by 34 nucleotides
AO353_18225: AO353_18225 - ATP-dependent RNA helicase HrpA, at 4,016,943 to 4,020,854
_18225
AO353_18230: AO353_18230 - 3-oxoacyl-ACP synthase, at 4,021,250 to 4,022,371
_18230
AO353_18235: AO353_18235 - RNA polymerase subunit sigma-24, at 4,022,426 to 4,023,034
_18235
AO353_18240: AO353_18240 - anti-sigma factor, at 4,023,028 to 4,023,264
_18240
AO353_18245: AO353_18245 - hypothetical protein, at 4,023,299 to 4,023,700
_18245
Position (kb)
4021
4022
4023 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4020.532 kb on - strand at 4020.532 kb on - strand at 4020.585 kb on + strand at 4020.586 kb on - strand at 4020.586 kb on - strand at 4020.586 kb on - strand at 4020.681 kb on + strand at 4020.681 kb on + strand at 4020.741 kb on + strand at 4020.742 kb on - strand at 4020.853 kb on - strand at 4020.932 kb on + strand at 4020.953 kb on - strand at 4020.953 kb on - strand at 4020.959 kb on + strand at 4021.037 kb on + strand at 4021.037 kb on + strand at 4021.037 kb on + strand at 4021.037 kb on + strand at 4021.037 kb on + strand at 4021.037 kb on + strand at 4021.037 kb on + strand at 4021.038 kb on - strand at 4021.038 kb on - strand at 4021.038 kb on - strand at 4021.038 kb on - strand at 4021.099 kb on + strand at 4021.099 kb on + strand at 4021.099 kb on + strand at 4021.101 kb on + strand at 4021.101 kb on + strand at 4021.102 kb on - strand at 4021.102 kb on - strand at 4021.102 kb on - strand at 4021.119 kb on - strand at 4021.119 kb on - strand at 4021.119 kb on - strand at 4021.193 kb on + strand at 4021.193 kb on + strand at 4021.193 kb on + strand at 4021.193 kb on + strand at 4021.193 kb on + strand at 4021.194 kb on - strand at 4021.194 kb on - strand at 4021.194 kb on - strand at 4021.203 kb on + strand at 4021.203 kb on + strand at 4021.204 kb on - strand at 4021.204 kb on - strand at 4021.204 kb on - strand at 4021.217 kb on + strand at 4021.217 kb on + strand at 4021.217 kb on + strand at 4021.217 kb on + strand at 4021.217 kb on + strand at 4021.218 kb on - strand at 4021.255 kb on + strand at 4021.255 kb on + strand at 4021.255 kb on + strand at 4021.255 kb on + strand at 4021.255 kb on + strand at 4021.255 kb on + strand at 4021.255 kb on + strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.256 kb on - strand at 4021.283 kb on + strand at 4021.283 kb on + strand at 4021.284 kb on - strand at 4021.284 kb on - strand at 4021.333 kb on + strand at 4021.333 kb on + strand at 4021.333 kb on + strand at 4021.333 kb on + strand at 4021.334 kb on - strand at 4021.334 kb on - strand at 4021.334 kb on - strand at 4021.334 kb on - strand at 4021.334 kb on - strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.337 kb on + strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.338 kb on - strand at 4021.471 kb on + strand, within AO353_18230 at 4021.471 kb on + strand, within AO353_18230 at 4021.471 kb on + strand, within AO353_18230 at 4021.471 kb on + strand, within AO353_18230 at 4021.471 kb on + strand, within AO353_18230 at 4021.471 kb on + strand, within AO353_18230 at 4021.472 kb on - strand, within AO353_18230 at 4021.472 kb on - strand, within AO353_18230 at 4021.472 kb on - strand, within AO353_18230 at 4021.472 kb on - strand, within AO353_18230 at 4021.758 kb on + strand, within AO353_18230 at 4021.758 kb on + strand, within AO353_18230 at 4021.758 kb on + strand, within AO353_18230 at 4021.759 kb on - strand, within AO353_18230 at 4021.759 kb on - strand, within AO353_18230 at 4021.759 kb on - strand, within AO353_18230 at 4021.759 kb on - strand, within AO353_18230 at 4021.873 kb on - strand, within AO353_18230 at 4021.907 kb on + strand, within AO353_18230 at 4021.907 kb on + strand, within AO353_18230 at 4021.907 kb on + strand, within AO353_18230 at 4021.908 kb on - strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.234 kb on + strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.235 kb on - strand, within AO353_18230 at 4022.337 kb on - strand at 4022.501 kb on + strand, within AO353_18235 at 4022.501 kb on + strand, within AO353_18235 at 4022.502 kb on - strand, within AO353_18235 at 4022.502 kb on - strand, within AO353_18235 at 4022.502 kb on - strand, within AO353_18235 at 4022.502 kb on - strand, within AO353_18235 at 4022.528 kb on + strand, within AO353_18235 at 4022.528 kb on + strand, within AO353_18235 at 4022.529 kb on - strand, within AO353_18235 at 4022.529 kb on - strand, within AO353_18235 at 4022.529 kb on - strand, within AO353_18235 at 4022.529 kb on - strand, within AO353_18235 at 4022.673 kb on - strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.848 kb on + strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand at 4022.849 kb on - strand, within AO353_18235 at 4022.849 kb on - strand at 4022.929 kb on + strand, within AO353_18235 at 4022.930 kb on - strand, within AO353_18235 at 4023.039 kb on + strand at 4023.040 kb on - strand at 4023.040 kb on - strand at 4023.050 kb on + strand at 4023.050 kb on + strand at 4023.051 kb on - strand at 4023.051 kb on - strand at 4023.051 kb on - strand at 4023.067 kb on + strand, within AO353_18240 at 4023.068 kb on - strand, within AO353_18240 at 4023.262 kb on + strand at 4023.262 kb on + strand at 4023.262 kb on + strand at 4023.263 kb on - strand at 4023.263 kb on - strand at 4023.263 kb on - strand at 4023.263 kb on - strand at 4023.268 kb on + strand at 4023.269 kb on - strand at 4023.269 kb on - strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.285 kb on + strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.286 kb on - strand at 4023.300 kb on + strand at 4023.300 kb on + strand at 4023.300 kb on + strand at 4023.300 kb on + strand at 4023.301 kb on - strand at 4023.301 kb on - strand at 4023.324 kb on + strand at 4023.324 kb on + strand at 4023.324 kb on + strand at 4023.324 kb on + strand at 4023.325 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 4,020,532 - +0.2 4,020,532 - +0.8 4,020,585 + -0.0 4,020,586 - +0.4 4,020,586 - -0.8 4,020,586 - +1.4 4,020,681 + -1.2 4,020,681 + -1.5 4,020,741 + +0.1 4,020,742 - -0.6 4,020,853 - -0.0 4,020,932 + +0.6 4,020,953 - +1.2 4,020,953 - -1.9 4,020,959 + +1.1 4,021,037 + +0.3 4,021,037 + -0.9 4,021,037 + +1.0 4,021,037 + -2.0 4,021,037 + -0.9 4,021,037 + +0.4 4,021,037 + -1.4 4,021,038 - -0.8 4,021,038 - -0.7 4,021,038 - +0.2 4,021,038 - -0.9 4,021,099 + -0.8 4,021,099 + +1.0 4,021,099 + -0.3 4,021,101 + +0.3 4,021,101 + +0.0 4,021,102 - -1.2 4,021,102 - +0.5 4,021,102 - -0.6 4,021,119 - -0.3 4,021,119 - +0.4 4,021,119 - +0.6 4,021,193 + +0.3 4,021,193 + +0.5 4,021,193 + +1.1 4,021,193 + +0.5 4,021,193 + +1.7 4,021,194 - -0.3 4,021,194 - +0.1 4,021,194 - +1.1 4,021,203 + +0.2 4,021,203 + -1.0 4,021,204 - -0.0 4,021,204 - -0.0 4,021,204 - +0.5 4,021,217 + +0.4 4,021,217 + +1.0 4,021,217 + +0.4 4,021,217 + -0.1 4,021,217 + -1.9 4,021,218 - +0.3 4,021,255 + +0.4 4,021,255 + +0.4 4,021,255 + +0.6 4,021,255 + +0.6 4,021,255 + +1.1 4,021,255 + -0.9 4,021,255 + -0.5 4,021,256 - -0.4 4,021,256 - -0.5 4,021,256 - -0.9 4,021,256 - -1.2 4,021,256 - -1.9 4,021,256 - +0.7 4,021,256 - +1.0 4,021,256 - +0.4 4,021,256 - -1.4 4,021,256 - +1.8 4,021,256 - +0.8 4,021,283 + +0.5 4,021,283 + +0.3 4,021,284 - -0.2 4,021,284 - +1.6 4,021,333 + +0.2 4,021,333 + +0.4 4,021,333 + -0.9 4,021,333 + +0.0 4,021,334 - +0.5 4,021,334 - +0.6 4,021,334 - +1.5 4,021,334 - -0.2 4,021,334 - -2.6 4,021,337 + +0.1 4,021,337 + +0.2 4,021,337 + -0.7 4,021,337 + -1.3 4,021,337 + +0.1 4,021,337 + +1.6 4,021,337 + +0.9 4,021,337 + +0.4 4,021,337 + -0.9 4,021,337 + +2.5 4,021,338 - -0.8 4,021,338 - +0.2 4,021,338 - +1.2 4,021,338 - +2.0 4,021,338 - +0.2 4,021,338 - +0.0 4,021,338 - +1.4 4,021,338 - -0.2 4,021,338 - -1.4 4,021,338 - -0.0 4,021,338 - +2.0 4,021,338 - -2.2 4,021,338 - +1.3 4,021,338 - -0.2 4,021,338 - -1.0 4,021,338 - -1.9 4,021,338 - +0.7 4,021,338 - +0.3 4,021,338 - +0.5 4,021,338 - -0.0 4,021,471 + AO353_18230 0.20 +0.1 4,021,471 + AO353_18230 0.20 -0.7 4,021,471 + AO353_18230 0.20 +0.0 4,021,471 + AO353_18230 0.20 +0.4 4,021,471 + AO353_18230 0.20 +1.4 4,021,471 + AO353_18230 0.20 -0.9 4,021,472 - AO353_18230 0.20 -0.6 4,021,472 - AO353_18230 0.20 -0.0 4,021,472 - AO353_18230 0.20 -0.2 4,021,472 - AO353_18230 0.20 +0.9 4,021,758 + AO353_18230 0.45 -2.5 4,021,758 + AO353_18230 0.45 +0.6 4,021,758 + AO353_18230 0.45 -1.4 4,021,759 - AO353_18230 0.45 -0.7 4,021,759 - AO353_18230 0.45 -1.4 4,021,759 - AO353_18230 0.45 +0.8 4,021,759 - AO353_18230 0.45 +1.0 4,021,873 - AO353_18230 0.56 +0.0 4,021,907 + AO353_18230 0.59 +2.1 4,021,907 + AO353_18230 0.59 -0.9 4,021,907 + AO353_18230 0.59 -0.4 4,021,908 - AO353_18230 0.59 -0.7 4,022,234 + AO353_18230 0.88 -1.0 4,022,234 + AO353_18230 0.88 +0.1 4,022,234 + AO353_18230 0.88 +0.0 4,022,234 + AO353_18230 0.88 +1.1 4,022,234 + AO353_18230 0.88 -0.6 4,022,234 + AO353_18230 0.88 +0.7 4,022,234 + AO353_18230 0.88 -0.4 4,022,234 + AO353_18230 0.88 -1.0 4,022,234 + AO353_18230 0.88 -0.9 4,022,234 + AO353_18230 0.88 -0.2 4,022,234 + AO353_18230 0.88 -0.1 4,022,234 + AO353_18230 0.88 -0.3 4,022,234 + AO353_18230 0.88 +0.4 4,022,234 + AO353_18230 0.88 -0.5 4,022,235 - AO353_18230 0.88 -0.6 4,022,235 - AO353_18230 0.88 -1.0 4,022,235 - AO353_18230 0.88 -0.6 4,022,235 - AO353_18230 0.88 -0.2 4,022,235 - AO353_18230 0.88 -2.2 4,022,235 - AO353_18230 0.88 -1.3 4,022,235 - AO353_18230 0.88 +0.7 4,022,235 - AO353_18230 0.88 +1.3 4,022,235 - AO353_18230 0.88 +0.4 4,022,235 - AO353_18230 0.88 +1.1 4,022,337 - -0.2 4,022,501 + AO353_18235 0.12 -1.8 4,022,501 + AO353_18235 0.12 -0.4 4,022,502 - AO353_18235 0.12 -0.4 4,022,502 - AO353_18235 0.12 +0.3 4,022,502 - AO353_18235 0.12 -0.7 4,022,502 - AO353_18235 0.12 -0.0 4,022,528 + AO353_18235 0.17 +0.2 4,022,528 + AO353_18235 0.17 +0.5 4,022,529 - AO353_18235 0.17 +0.9 4,022,529 - AO353_18235 0.17 +0.6 4,022,529 - AO353_18235 0.17 +0.5 4,022,529 - AO353_18235 0.17 -1.4 4,022,673 - AO353_18235 0.41 -1.2 4,022,848 + AO353_18235 0.69 +0.1 4,022,848 + AO353_18235 0.69 -0.0 4,022,848 + AO353_18235 0.69 +2.0 4,022,848 + AO353_18235 0.69 -1.4 4,022,848 + AO353_18235 0.69 +0.2 4,022,848 + AO353_18235 0.69 +0.3 4,022,848 + AO353_18235 0.69 -0.5 4,022,848 + AO353_18235 0.69 +1.1 4,022,848 + AO353_18235 0.69 -1.4 4,022,848 + AO353_18235 0.69 -1.0 4,022,848 + AO353_18235 0.69 -1.4 4,022,849 - AO353_18235 0.69 -0.7 4,022,849 - AO353_18235 0.69 -0.8 4,022,849 - AO353_18235 0.69 +0.1 4,022,849 - AO353_18235 0.69 -0.3 4,022,849 - AO353_18235 0.69 -0.6 4,022,849 - AO353_18235 0.69 +0.2 4,022,849 - AO353_18235 0.69 -0.7 4,022,849 - AO353_18235 0.69 -0.2 4,022,849 - +1.5 4,022,849 - AO353_18235 0.69 +0.5 4,022,849 - +0.4 4,022,929 + AO353_18235 0.83 -0.4 4,022,930 - AO353_18235 0.83 -0.6 4,023,039 + +0.4 4,023,040 - +1.1 4,023,040 - +0.2 4,023,050 + -1.6 4,023,050 + -0.3 4,023,051 - +0.6 4,023,051 - +0.2 4,023,051 - +0.7 4,023,067 + AO353_18240 0.16 +0.7 4,023,068 - AO353_18240 0.17 +1.1 4,023,262 + -1.9 4,023,262 + -1.4 4,023,262 + -0.3 4,023,263 - -0.0 4,023,263 - +0.4 4,023,263 - +0.7 4,023,263 - +1.3 4,023,268 + +0.5 4,023,269 - +0.1 4,023,269 - -0.0 4,023,285 + -0.6 4,023,285 + +1.1 4,023,285 + -0.4 4,023,285 + +0.3 4,023,285 + +0.2 4,023,285 + -1.0 4,023,285 + +0.5 4,023,285 + -0.5 4,023,285 + -0.4 4,023,285 + +0.5 4,023,286 - -2.0 4,023,286 - -0.6 4,023,286 - +0.3 4,023,286 - +0.0 4,023,286 - -0.5 4,023,286 - +1.2 4,023,286 - +0.6 4,023,286 - -0.4 4,023,286 - -0.2 4,023,300 + -0.5 4,023,300 + +0.6 4,023,300 + +0.3 4,023,300 + +0.1 4,023,301 - +0.6 4,023,301 - +1.1 4,023,324 + -0.6 4,023,324 + -0.6 4,023,324 + -0.5 4,023,324 + -1.6 4,023,325 - +0.4
Or see this region's nucleotide sequence