Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13205 and AO353_13210 are separated by 226 nucleotides AO353_13210 and AO353_13215 are separated by 28 nucleotides AO353_13215 and AO353_13220 are separated by 36 nucleotides AO353_13220 and AO353_13225 are separated by 19 nucleotides AO353_13225 and AO353_13230 are separated by 137 nucleotides
AO353_13205: AO353_13205 - 23S rRNA methyltransferase, at 2,928,455 to 2,929,222
_13205
AO353_13210: AO353_13210 - 30S ribosomal protein S6, at 2,929,449 to 2,929,871
_13210
AO353_13215: AO353_13215 - 30S ribosomal protein S18, at 2,929,900 to 2,930,130
_13215
AO353_13220: AO353_13220 - hypothetical protein, at 2,930,167 to 2,931,060
_13220
AO353_13225: AO353_13225 - 50S ribosomal protein L9, at 2,931,080 to 2,931,526
_13225
AO353_13230: AO353_13230 - replicative DNA helicase, at 2,931,664 to 2,933,061
_13230
Position (kb)
2930
2931
2932 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2929.287 kb on + strand at 2929.287 kb on + strand at 2929.384 kb on + strand at 2930.710 kb on + strand, within AO353_13220 at 2930.710 kb on + strand, within AO353_13220 at 2930.710 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.929 kb on + strand, within AO353_13220 at 2930.930 kb on - strand, within AO353_13220 at 2930.930 kb on - strand, within AO353_13220 at 2930.930 kb on - strand, within AO353_13220 at 2930.930 kb on - strand, within AO353_13220 at 2930.933 kb on + strand, within AO353_13220 at 2930.934 kb on - strand, within AO353_13220 at 2930.934 kb on - strand, within AO353_13220 at 2930.949 kb on + strand, within AO353_13220 at 2930.949 kb on + strand, within AO353_13220 at 2930.949 kb on + strand, within AO353_13220 at 2930.950 kb on - strand, within AO353_13220 at 2931.059 kb on - strand at 2931.066 kb on - strand at 2931.160 kb on + strand, within AO353_13225 at 2931.161 kb on - strand, within AO353_13225 at 2931.161 kb on - strand, within AO353_13225 at 2931.161 kb on - strand, within AO353_13225 at 2931.164 kb on + strand, within AO353_13225 at 2931.164 kb on + strand, within AO353_13225 at 2931.165 kb on - strand, within AO353_13225 at 2931.313 kb on + strand, within AO353_13225 at 2931.313 kb on + strand, within AO353_13225 at 2931.450 kb on + strand, within AO353_13225 at 2931.501 kb on + strand at 2931.524 kb on + strand at 2931.524 kb on + strand at 2931.531 kb on + strand at 2931.531 kb on + strand at 2931.531 kb on + strand at 2931.531 kb on + strand at 2931.531 kb on + strand at 2931.587 kb on + strand at 2931.587 kb on + strand at 2931.628 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 2,929,287 + -1.4 2,929,287 + +0.2 2,929,384 + -1.6 2,930,710 + AO353_13220 0.61 -1.9 2,930,710 + AO353_13220 0.61 -0.5 2,930,710 + AO353_13220 0.61 -1.4 2,930,929 + AO353_13220 0.85 -0.9 2,930,929 + AO353_13220 0.85 -1.8 2,930,929 + AO353_13220 0.85 -3.0 2,930,929 + AO353_13220 0.85 -1.5 2,930,929 + AO353_13220 0.85 -1.0 2,930,929 + AO353_13220 0.85 -1.4 2,930,929 + AO353_13220 0.85 -0.7 2,930,929 + AO353_13220 0.85 -1.6 2,930,929 + AO353_13220 0.85 -0.3 2,930,929 + AO353_13220 0.85 +0.1 2,930,929 + AO353_13220 0.85 +0.3 2,930,929 + AO353_13220 0.85 +0.0 2,930,929 + AO353_13220 0.85 -1.6 2,930,929 + AO353_13220 0.85 +0.7 2,930,930 - AO353_13220 0.85 -0.5 2,930,930 - AO353_13220 0.85 -0.7 2,930,930 - AO353_13220 0.85 -0.3 2,930,930 - AO353_13220 0.85 -2.2 2,930,933 + AO353_13220 0.86 -2.1 2,930,934 - AO353_13220 0.86 +0.2 2,930,934 - AO353_13220 0.86 -1.9 2,930,949 + AO353_13220 0.87 -0.0 2,930,949 + AO353_13220 0.87 -1.1 2,930,949 + AO353_13220 0.87 -1.5 2,930,950 - AO353_13220 0.88 -1.2 2,931,059 - +0.5 2,931,066 - +0.0 2,931,160 + AO353_13225 0.18 -1.2 2,931,161 - AO353_13225 0.18 -1.9 2,931,161 - AO353_13225 0.18 +1.5 2,931,161 - AO353_13225 0.18 -1.0 2,931,164 + AO353_13225 0.19 -1.3 2,931,164 + AO353_13225 0.19 -0.7 2,931,165 - AO353_13225 0.19 -0.7 2,931,313 + AO353_13225 0.52 -2.2 2,931,313 + AO353_13225 0.52 -2.4 2,931,450 + AO353_13225 0.83 -2.6 2,931,501 + -2.1 2,931,524 + -2.1 2,931,524 + -0.0 2,931,531 + -0.7 2,931,531 + -0.9 2,931,531 + -1.8 2,931,531 + -1.1 2,931,531 + -1.6 2,931,587 + -2.7 2,931,587 + -1.4 2,931,628 + -0.4
Or see this region's nucleotide sequence