Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06480 and AO353_06485 are separated by 9 nucleotides AO353_06485 and AO353_06490 are separated by 73 nucleotides AO353_06490 and AO353_06495 are separated by 1 nucleotides
AO353_06480: AO353_06480 - 50S rRNA methyltransferase, at 1,444,383 to 1,444,850
_06480
AO353_06485: AO353_06485 - ribosome silencing factor, at 1,444,860 to 1,445,354
_06485
AO353_06490: AO353_06490 - nicotinate-nucleotide adenylyltransferase, at 1,445,428 to 1,446,117
_06490
AO353_06495: AO353_06495 - gamma-glutamyl phosphate reductase, at 1,446,119 to 1,447,390
_06495
Position (kb)
1445
1446
1447 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1445.329 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.393 kb on - strand at 1445.393 kb on - strand at 1445.393 kb on - strand at 1445.393 kb on - strand at 1445.426 kb on - strand at 1445.426 kb on - strand at 1445.426 kb on - strand at 1445.426 kb on - strand at 1445.445 kb on - strand at 1445.466 kb on - strand at 1445.466 kb on - strand at 1445.466 kb on - strand at 1445.466 kb on - strand at 1445.506 kb on - strand, within AO353_06490 at 1445.506 kb on - strand, within AO353_06490 at 1445.822 kb on + strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.861 kb on - strand, within AO353_06490 at 1445.861 kb on - strand, within AO353_06490 at 1445.873 kb on - strand, within AO353_06490 at 1445.873 kb on - strand, within AO353_06490 at 1445.873 kb on - strand, within AO353_06490 at 1446.165 kb on + strand at 1446.166 kb on - strand at 1446.218 kb on - strand at 1446.224 kb on - strand at 1446.622 kb on - strand, within AO353_06495 at 1446.628 kb on - strand, within AO353_06495 at 1446.687 kb on + strand, within AO353_06495 at 1446.687 kb on + strand, within AO353_06495 at 1446.687 kb on + strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.688 kb on - strand, within AO353_06495 at 1446.793 kb on - strand, within AO353_06495 at 1446.793 kb on - strand, within AO353_06495 at 1447.014 kb on + strand, within AO353_06495 at 1447.015 kb on - strand, within AO353_06495 at 1447.015 kb on - strand, within AO353_06495 at 1447.015 kb on - strand, within AO353_06495 at 1447.015 kb on - strand, within AO353_06495 at 1447.015 kb on - strand, within AO353_06495 at 1447.015 kb on - strand, within AO353_06495 at 1447.015 kb on - strand, within AO353_06495 at 1447.078 kb on - strand, within AO353_06495
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 1,444,784 - AO353_06480 0.86 -0.2 1,444,784 - AO353_06480 0.86 -2.2 1,444,784 - AO353_06480 0.86 +0.2 1,444,784 - AO353_06480 0.86 -0.5 1,444,784 - AO353_06480 0.86 +0.6 1,444,784 - AO353_06480 0.86 +0.5 1,445,329 - -2.2 1,445,375 - -0.2 1,445,375 - -1.5 1,445,375 - +0.1 1,445,375 - -0.8 1,445,375 - +0.5 1,445,375 - +0.2 1,445,375 - +1.2 1,445,393 - -0.1 1,445,393 - +0.2 1,445,393 - -1.3 1,445,393 - -0.4 1,445,426 - -0.4 1,445,426 - -0.2 1,445,426 - +0.0 1,445,426 - -0.3 1,445,445 - -0.2 1,445,466 - +0.0 1,445,466 - -0.3 1,445,466 - +0.9 1,445,466 - -0.4 1,445,506 - AO353_06490 0.11 -0.8 1,445,506 - AO353_06490 0.11 -1.2 1,445,822 + AO353_06490 0.57 -0.2 1,445,823 - AO353_06490 0.57 -1.8 1,445,823 - AO353_06490 0.57 +1.9 1,445,823 - AO353_06490 0.57 -0.6 1,445,823 - AO353_06490 0.57 +0.0 1,445,823 - AO353_06490 0.57 -0.1 1,445,823 - AO353_06490 0.57 +0.9 1,445,861 - AO353_06490 0.63 -0.3 1,445,861 - AO353_06490 0.63 -0.9 1,445,873 - AO353_06490 0.64 -2.0 1,445,873 - AO353_06490 0.64 -0.8 1,445,873 - AO353_06490 0.64 +1.4 1,446,165 + +1.9 1,446,166 - -1.3 1,446,218 - -0.5 1,446,224 - -1.0 1,446,622 - AO353_06495 0.40 -1.2 1,446,628 - AO353_06495 0.40 -0.8 1,446,687 + AO353_06495 0.45 -1.5 1,446,687 + AO353_06495 0.45 -1.6 1,446,687 + AO353_06495 0.45 -0.3 1,446,688 - AO353_06495 0.45 -0.6 1,446,688 - AO353_06495 0.45 -1.1 1,446,688 - AO353_06495 0.45 -1.6 1,446,688 - AO353_06495 0.45 -0.5 1,446,688 - AO353_06495 0.45 -0.6 1,446,688 - AO353_06495 0.45 -0.8 1,446,688 - AO353_06495 0.45 -1.6 1,446,688 - AO353_06495 0.45 -0.6 1,446,688 - AO353_06495 0.45 +0.6 1,446,793 - AO353_06495 0.53 -1.1 1,446,793 - AO353_06495 0.53 +0.8 1,447,014 + AO353_06495 0.70 +0.2 1,447,015 - AO353_06495 0.70 -1.2 1,447,015 - AO353_06495 0.70 -0.8 1,447,015 - AO353_06495 0.70 -1.0 1,447,015 - AO353_06495 0.70 -0.7 1,447,015 - AO353_06495 0.70 -1.0 1,447,015 - AO353_06495 0.70 -0.3 1,447,015 - AO353_06495 0.70 -1.3 1,447,078 - AO353_06495 0.75 -0.6
Or see this region's nucleotide sequence