Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00570 and AO353_00575 are separated by 101 nucleotides AO353_00575 and AO353_00580 are separated by 204 nucleotides AO353_00580 and AO353_00585 are separated by 98 nucleotides
AO353_00570: AO353_00570 - CAAX protease, at 121,008 to 121,799
_00570
AO353_00575: AO353_00575 - chemotaxis protein, at 121,901 to 123,466
_00575
AO353_00580: AO353_00580 - alpha/beta hydrolase, at 123,671 to 124,348
_00580
AO353_00585: AO353_00585 - cytochrome C oxidase Cbb3, at 124,447 to 125,871
_00585
Position (kb)
121
122
123
124 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 120.947 kb on - strand at 121.029 kb on + strand at 121.029 kb on + strand at 121.029 kb on + strand at 121.029 kb on + strand at 121.030 kb on - strand at 121.030 kb on - strand at 121.053 kb on + strand at 121.071 kb on + strand at 121.071 kb on + strand at 121.071 kb on + strand at 121.071 kb on + strand at 121.071 kb on + strand at 121.071 kb on + strand at 121.071 kb on + strand at 121.072 kb on - strand at 121.115 kb on - strand, within AO353_00570 at 121.231 kb on - strand, within AO353_00570 at 121.231 kb on - strand, within AO353_00570 at 121.231 kb on - strand, within AO353_00570 at 121.231 kb on - strand, within AO353_00570 at 121.231 kb on - strand, within AO353_00570 at 121.290 kb on + strand, within AO353_00570 at 121.290 kb on + strand, within AO353_00570 at 121.290 kb on + strand, within AO353_00570 at 121.290 kb on + strand, within AO353_00570 at 121.291 kb on - strand, within AO353_00570 at 121.291 kb on - strand, within AO353_00570 at 121.380 kb on + strand, within AO353_00570 at 121.380 kb on + strand, within AO353_00570 at 121.380 kb on + strand, within AO353_00570 at 121.380 kb on + strand, within AO353_00570 at 121.380 kb on + strand, within AO353_00570 at 121.380 kb on + strand, within AO353_00570 at 121.381 kb on - strand, within AO353_00570 at 121.381 kb on - strand, within AO353_00570 at 121.381 kb on - strand, within AO353_00570 at 121.381 kb on - strand, within AO353_00570 at 121.381 kb on - strand, within AO353_00570 at 121.446 kb on - strand, within AO353_00570 at 121.446 kb on - strand, within AO353_00570 at 121.446 kb on - strand, within AO353_00570 at 121.546 kb on - strand, within AO353_00570 at 121.546 kb on - strand, within AO353_00570 at 121.663 kb on + strand, within AO353_00570 at 121.664 kb on - strand, within AO353_00570 at 121.776 kb on - strand at 121.776 kb on - strand at 121.776 kb on - strand at 121.780 kb on - strand at 121.805 kb on + strand at 121.805 kb on + strand at 121.806 kb on - strand at 121.806 kb on - strand at 121.806 kb on - strand at 121.806 kb on - strand at 121.850 kb on + strand at 121.851 kb on - strand at 121.851 kb on - strand at 121.906 kb on + strand at 121.906 kb on + strand at 121.907 kb on - strand at 121.907 kb on - strand at 121.907 kb on - strand at 121.907 kb on - strand at 121.907 kb on - strand at 121.907 kb on - strand at 121.907 kb on - strand at 121.907 kb on - strand at 121.909 kb on + strand at 121.910 kb on - strand at 121.921 kb on + strand at 121.921 kb on + strand at 121.921 kb on + strand at 121.921 kb on + strand at 121.921 kb on + strand at 121.921 kb on + strand at 121.922 kb on - strand at 121.922 kb on - strand at 121.922 kb on - strand at 121.922 kb on - strand at 121.922 kb on - strand at 121.994 kb on + strand at 121.994 kb on + strand at 121.994 kb on + strand at 121.994 kb on + strand at 121.994 kb on + strand at 121.995 kb on - strand at 121.995 kb on - strand at 121.995 kb on - strand at 121.995 kb on - strand at 122.177 kb on + strand, within AO353_00575 at 122.178 kb on - strand, within AO353_00575 at 122.192 kb on + strand, within AO353_00575 at 122.193 kb on - strand, within AO353_00575 at 122.193 kb on - strand, within AO353_00575 at 122.193 kb on - strand, within AO353_00575 at 122.206 kb on - strand, within AO353_00575 at 122.288 kb on + strand, within AO353_00575 at 122.288 kb on + strand, within AO353_00575 at 122.288 kb on + strand, within AO353_00575 at 122.289 kb on - strand, within AO353_00575 at 122.289 kb on - strand, within AO353_00575 at 122.289 kb on - strand, within AO353_00575 at 122.289 kb on - strand, within AO353_00575 at 122.552 kb on + strand, within AO353_00575 at 122.552 kb on + strand, within AO353_00575 at 122.552 kb on + strand, within AO353_00575 at 122.552 kb on + strand, within AO353_00575 at 122.552 kb on + strand, within AO353_00575 at 122.553 kb on - strand, within AO353_00575 at 122.553 kb on - strand, within AO353_00575 at 123.078 kb on + strand, within AO353_00575 at 123.078 kb on + strand, within AO353_00575 at 123.079 kb on - strand, within AO353_00575 at 123.079 kb on - strand, within AO353_00575 at 123.079 kb on - strand, within AO353_00575 at 123.079 kb on - strand, within AO353_00575 at 123.079 kb on - strand, within AO353_00575 at 123.244 kb on + strand, within AO353_00575 at 123.318 kb on + strand at 123.399 kb on + strand at 123.430 kb on + strand at 123.437 kb on + strand at 123.438 kb on - strand at 123.438 kb on - strand at 123.447 kb on + strand at 123.481 kb on + strand at 123.481 kb on + strand at 123.481 kb on + strand at 123.481 kb on + strand at 123.482 kb on - strand at 123.516 kb on + strand at 123.517 kb on - strand at 123.543 kb on + strand at 123.544 kb on - strand at 123.576 kb on + strand at 123.576 kb on + strand at 123.576 kb on + strand at 123.576 kb on + strand at 123.577 kb on - strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.582 kb on + strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.583 kb on - strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.586 kb on + strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.587 kb on - strand at 123.614 kb on - strand at 123.727 kb on + strand at 123.727 kb on + strand at 123.728 kb on - strand at 123.728 kb on - strand at 123.728 kb on - strand at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.805 kb on + strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.806 kb on - strand, within AO353_00580 at 123.807 kb on + strand, within AO353_00580 at 123.808 kb on - strand, within AO353_00580 at 123.924 kb on + strand, within AO353_00580 at 124.053 kb on + strand, within AO353_00580 at 124.053 kb on + strand, within AO353_00580 at 124.053 kb on + strand, within AO353_00580 at 124.053 kb on + strand, within AO353_00580 at 124.053 kb on + strand, within AO353_00580 at 124.053 kb on + strand, within AO353_00580 at 124.054 kb on - strand, within AO353_00580 at 124.054 kb on - strand, within AO353_00580 at 124.054 kb on - strand, within AO353_00580 at 124.054 kb on - strand, within AO353_00580 at 124.054 kb on - strand, within AO353_00580 at 124.363 kb on + strand at 124.363 kb on + strand at 124.364 kb on - strand at 124.372 kb on + strand at 124.372 kb on + strand at 124.372 kb on + strand at 124.373 kb on - strand at 124.373 kb on - strand at 124.373 kb on - strand at 124.373 kb on - strand at 124.373 kb on - strand at 124.374 kb on + strand at 124.374 kb on + strand at 124.374 kb on + strand at 124.375 kb on - strand at 124.375 kb on - strand at 124.375 kb on - strand at 124.375 kb on - strand at 124.460 kb on + strand at 124.460 kb on + strand at 124.460 kb on + strand at 124.460 kb on + strand at 124.460 kb on + strand at 124.460 kb on + strand at 124.461 kb on - strand at 124.461 kb on - strand at 124.461 kb on - strand at 124.461 kb on - strand at 124.461 kb on - strand at 124.461 kb on - strand at 124.464 kb on + strand at 124.464 kb on + strand at 124.464 kb on + strand at 124.465 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 120,947 - +0.9 121,029 + -0.2 121,029 + -1.3 121,029 + +0.5 121,029 + -0.5 121,030 - -1.4 121,030 - +0.4 121,053 + -0.1 121,071 + -0.9 121,071 + +0.1 121,071 + +0.4 121,071 + +0.2 121,071 + +0.7 121,071 + +0.5 121,071 + -0.6 121,072 - -1.0 121,115 - AO353_00570 0.14 +0.4 121,231 - AO353_00570 0.28 -0.1 121,231 - AO353_00570 0.28 -1.1 121,231 - AO353_00570 0.28 +0.1 121,231 - AO353_00570 0.28 -0.1 121,231 - AO353_00570 0.28 +0.5 121,290 + AO353_00570 0.36 -1.7 121,290 + AO353_00570 0.36 -0.2 121,290 + AO353_00570 0.36 +0.6 121,290 + AO353_00570 0.36 -1.2 121,291 - AO353_00570 0.36 -1.5 121,291 - AO353_00570 0.36 -1.6 121,380 + AO353_00570 0.47 -0.4 121,380 + AO353_00570 0.47 +0.1 121,380 + AO353_00570 0.47 -0.4 121,380 + AO353_00570 0.47 +0.4 121,380 + AO353_00570 0.47 +1.2 121,380 + AO353_00570 0.47 +0.6 121,381 - AO353_00570 0.47 +0.4 121,381 - AO353_00570 0.47 +0.0 121,381 - AO353_00570 0.47 +0.5 121,381 - AO353_00570 0.47 +0.6 121,381 - AO353_00570 0.47 +0.7 121,446 - AO353_00570 0.55 +0.7 121,446 - AO353_00570 0.55 -0.9 121,446 - AO353_00570 0.55 +0.9 121,546 - AO353_00570 0.68 +0.6 121,546 - AO353_00570 0.68 +0.0 121,663 + AO353_00570 0.83 +0.3 121,664 - AO353_00570 0.83 +0.7 121,776 - +0.9 121,776 - -0.9 121,776 - +0.2 121,780 - +1.2 121,805 + +0.4 121,805 + -0.1 121,806 - +0.8 121,806 - +0.6 121,806 - -0.5 121,806 - -0.6 121,850 + +1.4 121,851 - -0.5 121,851 - +1.7 121,906 + +1.0 121,906 + +0.2 121,907 - -0.1 121,907 - +1.3 121,907 - +1.1 121,907 - +0.3 121,907 - -1.3 121,907 - +1.0 121,907 - +0.2 121,907 - +0.8 121,909 + +2.5 121,910 - +0.6 121,921 + +0.8 121,921 + +0.0 121,921 + -0.1 121,921 + +2.6 121,921 + +1.4 121,921 + -1.6 121,922 - +1.2 121,922 - -0.1 121,922 - -2.3 121,922 - +1.9 121,922 - -0.6 121,994 + +0.1 121,994 + +2.0 121,994 + -1.1 121,994 + +0.4 121,994 + +0.2 121,995 - +0.9 121,995 - +1.6 121,995 - +1.7 121,995 - +0.9 122,177 + AO353_00575 0.18 -1.0 122,178 - AO353_00575 0.18 -0.4 122,192 + AO353_00575 0.19 -1.8 122,193 - AO353_00575 0.19 -1.4 122,193 - AO353_00575 0.19 -2.0 122,193 - AO353_00575 0.19 +0.1 122,206 - AO353_00575 0.19 -1.3 122,288 + AO353_00575 0.25 -0.6 122,288 + AO353_00575 0.25 -0.4 122,288 + AO353_00575 0.25 -0.4 122,289 - AO353_00575 0.25 -0.7 122,289 - AO353_00575 0.25 +1.1 122,289 - AO353_00575 0.25 +1.0 122,289 - AO353_00575 0.25 -0.2 122,552 + AO353_00575 0.42 -1.0 122,552 + AO353_00575 0.42 -1.4 122,552 + AO353_00575 0.42 -0.0 122,552 + AO353_00575 0.42 +1.3 122,552 + AO353_00575 0.42 -0.3 122,553 - AO353_00575 0.42 -1.4 122,553 - AO353_00575 0.42 -0.7 123,078 + AO353_00575 0.75 -0.4 123,078 + AO353_00575 0.75 -0.9 123,079 - AO353_00575 0.75 +0.6 123,079 - AO353_00575 0.75 -0.2 123,079 - AO353_00575 0.75 -1.2 123,079 - AO353_00575 0.75 -2.2 123,079 - AO353_00575 0.75 +1.0 123,244 + AO353_00575 0.86 +0.1 123,318 + +2.2 123,399 + -0.6 123,430 + +1.5 123,437 + -2.5 123,438 - -1.0 123,438 - +0.5 123,447 + +0.4 123,481 + -0.2 123,481 + -0.7 123,481 + +1.4 123,481 + -0.3 123,482 - -0.7 123,516 + -0.5 123,517 - +1.4 123,543 + -0.5 123,544 - +0.9 123,576 + -0.3 123,576 + -2.2 123,576 + +1.2 123,576 + +0.5 123,577 - -0.2 123,582 + +0.7 123,582 + -0.7 123,582 + +1.0 123,582 + -1.0 123,582 + +0.2 123,582 + +0.0 123,582 + +2.6 123,582 + +2.1 123,582 + -1.9 123,582 + -1.1 123,582 + -0.8 123,582 + -2.4 123,582 + -1.3 123,582 + -0.4 123,582 + +0.7 123,582 + +0.2 123,582 + +0.5 123,582 + -2.3 123,582 + +0.4 123,582 + -1.2 123,582 + -0.1 123,582 + +1.0 123,582 + +1.7 123,583 - -0.1 123,583 - -2.4 123,583 - -0.4 123,583 - +0.1 123,583 - -1.4 123,583 - -0.5 123,583 - +0.9 123,583 - +0.3 123,583 - -0.6 123,583 - +0.8 123,583 - -1.0 123,583 - -0.8 123,583 - -0.3 123,583 - +0.2 123,583 - +1.4 123,583 - +0.3 123,583 - +0.8 123,583 - +1.1 123,583 - +0.3 123,583 - +1.1 123,583 - +0.7 123,583 - +1.0 123,586 + -1.4 123,586 + +0.1 123,586 + -0.9 123,586 + -0.7 123,586 + -0.6 123,586 + -1.0 123,586 + +1.9 123,586 + +0.6 123,586 + -0.0 123,586 + +1.0 123,587 - +0.1 123,587 - +0.8 123,587 - -1.3 123,587 - -0.1 123,587 - +0.9 123,587 - +1.1 123,587 - -0.4 123,587 - +0.6 123,587 - -0.1 123,587 - +0.7 123,587 - +0.5 123,587 - +0.7 123,587 - -0.2 123,614 - +0.9 123,727 + +0.6 123,727 + +1.1 123,728 - -0.9 123,728 - +1.4 123,728 - +0.7 123,805 + AO353_00580 0.20 +0.1 123,805 + AO353_00580 0.20 -0.5 123,805 + AO353_00580 0.20 +0.1 123,805 + AO353_00580 0.20 -0.5 123,805 + AO353_00580 0.20 +1.1 123,805 + AO353_00580 0.20 +0.7 123,805 + AO353_00580 0.20 -0.1 123,805 + AO353_00580 0.20 +0.3 123,805 + AO353_00580 0.20 +1.5 123,805 + AO353_00580 0.20 -0.4 123,805 + AO353_00580 0.20 -1.8 123,805 + AO353_00580 0.20 -2.1 123,806 - AO353_00580 0.20 +0.9 123,806 - AO353_00580 0.20 +0.1 123,806 - AO353_00580 0.20 -0.4 123,806 - AO353_00580 0.20 +0.2 123,806 - AO353_00580 0.20 +0.2 123,806 - AO353_00580 0.20 +1.5 123,806 - AO353_00580 0.20 -2.1 123,806 - AO353_00580 0.20 -0.8 123,806 - AO353_00580 0.20 +0.3 123,806 - AO353_00580 0.20 -0.1 123,806 - +1.9 123,806 - AO353_00580 0.20 +0.8 123,806 - AO353_00580 0.20 +0.9 123,806 - AO353_00580 0.20 +1.6 123,806 - AO353_00580 0.20 -0.0 123,806 - AO353_00580 0.20 -2.0 123,806 - AO353_00580 0.20 -0.2 123,806 - AO353_00580 0.20 +2.6 123,806 - AO353_00580 0.20 -0.4 123,807 + AO353_00580 0.20 -0.3 123,808 - AO353_00580 0.20 +0.1 123,924 + AO353_00580 0.37 -1.7 124,053 + AO353_00580 0.56 +0.3 124,053 + AO353_00580 0.56 -2.0 124,053 + AO353_00580 0.56 -1.2 124,053 + AO353_00580 0.56 +0.4 124,053 + AO353_00580 0.56 -0.2 124,053 + AO353_00580 0.56 -1.2 124,054 - AO353_00580 0.56 +1.1 124,054 - AO353_00580 0.56 +1.9 124,054 - AO353_00580 0.56 -0.2 124,054 - AO353_00580 0.56 -1.3 124,054 - AO353_00580 0.56 +0.4 124,363 + -2.2 124,363 + -0.4 124,364 - -1.6 124,372 + +0.1 124,372 + +0.5 124,372 + +0.6 124,373 - -0.3 124,373 - -1.3 124,373 - -2.3 124,373 - -0.9 124,373 - -1.0 124,374 + -0.4 124,374 + +0.8 124,374 + +0.3 124,375 - +0.3 124,375 - +0.3 124,375 - +0.1 124,375 - +0.3 124,460 + -0.3 124,460 + -0.7 124,460 + +0.5 124,460 + -1.7 124,460 + -0.3 124,460 + +0.9 124,461 - -0.4 124,461 - -1.8 124,461 - -0.6 124,461 - +0.2 124,461 - -1.5 124,461 - +1.1 124,464 + +0.1 124,464 + -0.3 124,464 + -1.1 124,465 - +0.3
Or see this region's nucleotide sequence