Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1363

Experiment: D-Mannose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT1362 and BT1363 overlap by 1 nucleotidesBT1363 and BT1364 are separated by 79 nucleotides BT1362: BT1362 - flavoprotein (NCBI ptt file), at 1,689,941 to 1,691,143 BT1362 BT1363: BT1363 - DNA Pol III Epsilon Chain (NCBI ptt file), at 1,691,143 to 1,691,976 BT1363 BT1364: BT1364 - DNA polymerase III, beta chain (NCBI ptt file), at 1,692,056 to 1,693,180 BT1364 Position (kb) 1691 1692Strain fitness (log2 ratio) -2 -1 0 1at 1691.161 kb on - strandat 1691.439 kb on - strand, within BT1363at 1691.503 kb on - strand, within BT1363at 1691.552 kb on - strand, within BT1363

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Mannose (C)
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1,691,161 - -0.0
1,691,439 - BT1363 0.35 -1.9
1,691,503 - BT1363 0.43 -1.3
1,691,552 - BT1363 0.49 +0.1

Or see this region's nucleotide sequence