Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_01803 and CCNA_01804 are separated by 18 nucleotides CCNA_01804 and CCNA_01805 are separated by 82 nucleotides
CCNA_01803: CCNA_01803 - pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase component, at 1,926,921 to 1,928,207
_01803
CCNA_01804: CCNA_01804 - glutathione peroxidase, at 1,928,226 to 1,928,708
_01804
CCNA_01805: CCNA_01805 - dihydrolipoamide dehydrogenase, at 1,928,791 to 1,930,191
_01805
Position (kb)
1928
1929 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1928.201 kb on + strand at 1928.201 kb on + strand at 1928.214 kb on - strand at 1928.222 kb on + strand at 1928.230 kb on - strand at 1928.231 kb on - strand at 1928.233 kb on + strand at 1928.323 kb on + strand, within CCNA_01804 at 1928.372 kb on + strand, within CCNA_01804 at 1928.377 kb on - strand, within CCNA_01804 at 1928.380 kb on - strand, within CCNA_01804 at 1928.380 kb on - strand, within CCNA_01804 at 1928.403 kb on + strand, within CCNA_01804 at 1928.403 kb on + strand, within CCNA_01804 at 1928.403 kb on + strand, within CCNA_01804 at 1928.403 kb on + strand, within CCNA_01804 at 1928.403 kb on + strand, within CCNA_01804 at 1928.411 kb on - strand, within CCNA_01804 at 1928.426 kb on + strand, within CCNA_01804 at 1928.431 kb on + strand, within CCNA_01804 at 1928.434 kb on + strand, within CCNA_01804 at 1928.476 kb on - strand, within CCNA_01804 at 1928.480 kb on + strand, within CCNA_01804 at 1928.482 kb on + strand, within CCNA_01804 at 1928.510 kb on - strand, within CCNA_01804 at 1928.544 kb on + strand, within CCNA_01804 at 1928.544 kb on + strand, within CCNA_01804 at 1928.554 kb on - strand, within CCNA_01804 at 1928.554 kb on - strand, within CCNA_01804 at 1928.579 kb on + strand, within CCNA_01804 at 1928.702 kb on + strand at 1928.702 kb on + strand at 1928.702 kb on + strand at 1928.702 kb on + strand at 1928.702 kb on + strand at 1928.702 kb on + strand at 1928.702 kb on + strand at 1928.710 kb on - strand at 1928.710 kb on - strand at 1928.710 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,928,201 + +1.0 1,928,201 + +1.5 1,928,214 - +0.9 1,928,222 + +3.0 1,928,230 - +0.0 1,928,231 - +0.4 1,928,233 + +1.5 1,928,323 + CCNA_01804 0.20 +0.7 1,928,372 + CCNA_01804 0.30 +0.6 1,928,377 - CCNA_01804 0.31 -0.2 1,928,380 - CCNA_01804 0.32 +2.2 1,928,380 - CCNA_01804 0.32 +0.9 1,928,403 + CCNA_01804 0.37 +0.8 1,928,403 + CCNA_01804 0.37 +0.3 1,928,403 + CCNA_01804 0.37 +0.4 1,928,403 + CCNA_01804 0.37 +1.5 1,928,403 + CCNA_01804 0.37 -0.9 1,928,411 - CCNA_01804 0.38 -0.6 1,928,426 + CCNA_01804 0.41 +1.9 1,928,431 + CCNA_01804 0.42 +0.0 1,928,434 + CCNA_01804 0.43 +1.6 1,928,476 - CCNA_01804 0.52 -1.6 1,928,480 + CCNA_01804 0.53 +1.5 1,928,482 + CCNA_01804 0.53 +1.6 1,928,510 - CCNA_01804 0.59 +2.2 1,928,544 + CCNA_01804 0.66 +1.3 1,928,544 + CCNA_01804 0.66 +2.1 1,928,554 - CCNA_01804 0.68 +0.0 1,928,554 - CCNA_01804 0.68 +0.6 1,928,579 + CCNA_01804 0.73 +1.7 1,928,702 + +0.5 1,928,702 + +2.2 1,928,702 + +1.4 1,928,702 + +1.8 1,928,702 + +0.9 1,928,702 + +1.6 1,928,702 + +1.2 1,928,710 - +0.5 1,928,710 - +1.2 1,928,710 - -0.5
Or see this region's nucleotide sequence