Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3703 and Ac3H11_3704 are separated by 20 nucleotides Ac3H11_3704 and Ac3H11_3705 overlap by 4 nucleotides
Ac3H11_3703 - Urea ABC transporter, permease protein UrtB, at 61,960 to 63,543
_3703
Ac3H11_3704 - Urea ABC transporter, permease protein UrtC, at 63,564 to 64,703
_3704
Ac3H11_3705 - Urea ABC transporter, ATPase protein UrtD, at 64,700 to 65,575
_3705
Position (kb) 63
64
65 Strain fitness (log2 ratio) -1
0
1
2 at 62.791 kb on + strand, within Ac3H11_3703 at 62.791 kb on + strand, within Ac3H11_3703 at 62.791 kb on + strand, within Ac3H11_3703 at 62.792 kb on - strand, within Ac3H11_3703 at 62.792 kb on - strand, within Ac3H11_3703 at 62.792 kb on - strand, within Ac3H11_3703 at 62.842 kb on + strand, within Ac3H11_3703 at 63.082 kb on + strand, within Ac3H11_3703 at 63.136 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.329 kb on - strand, within Ac3H11_3703 at 63.356 kb on + strand, within Ac3H11_3703 at 63.357 kb on - strand, within Ac3H11_3703 at 63.391 kb on + strand at 63.391 kb on + strand at 63.392 kb on - strand at 63.570 kb on - strand at 63.727 kb on - strand, within Ac3H11_3704 at 63.759 kb on + strand, within Ac3H11_3704 at 63.760 kb on - strand, within Ac3H11_3704 at 63.760 kb on - strand, within Ac3H11_3704 at 63.799 kb on - strand, within Ac3H11_3704 at 63.799 kb on - strand, within Ac3H11_3704 at 63.849 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand at 63.864 kb on + strand, within Ac3H11_3704 at 63.865 kb on - strand, within Ac3H11_3704 at 63.865 kb on - strand, within Ac3H11_3704 at 63.897 kb on + strand, within Ac3H11_3704 at 63.898 kb on - strand, within Ac3H11_3704 at 63.898 kb on - strand, within Ac3H11_3704 at 64.068 kb on + strand, within Ac3H11_3704 at 64.069 kb on - strand, within Ac3H11_3704 at 64.069 kb on - strand, within Ac3H11_3704 at 64.341 kb on + strand, within Ac3H11_3704 at 64.357 kb on - strand, within Ac3H11_3704 at 64.357 kb on - strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.590 kb on + strand at 64.591 kb on - strand at 65.561 kb on + strand at 65.561 kb on + strand at 65.562 kb on - strand at 65.562 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 62,791 + Ac3H11_3703 0.52 +1.4 62,791 + Ac3H11_3703 0.52 -0.6 62,791 + Ac3H11_3703 0.52 -0.2 62,792 - Ac3H11_3703 0.53 -0.9 62,792 - Ac3H11_3703 0.53 -0.7 62,792 - Ac3H11_3703 0.53 -1.0 62,842 + Ac3H11_3703 0.56 +1.0 63,082 + Ac3H11_3703 0.71 +0.4 63,136 + Ac3H11_3703 0.74 +1.3 63,328 + Ac3H11_3703 0.86 +1.0 63,328 + Ac3H11_3703 0.86 +1.1 63,328 + Ac3H11_3703 0.86 +0.6 63,328 + Ac3H11_3703 0.86 +0.3 63,329 - Ac3H11_3703 0.86 -1.2 63,356 + Ac3H11_3703 0.88 +1.5 63,357 - Ac3H11_3703 0.88 -1.1 63,391 + +0.9 63,391 + -0.6 63,392 - +0.8 63,570 - +0.5 63,727 - Ac3H11_3704 0.14 +0.2 63,759 + Ac3H11_3704 0.17 -0.1 63,760 - Ac3H11_3704 0.17 +1.0 63,760 - Ac3H11_3704 0.17 +0.7 63,799 - Ac3H11_3704 0.21 -0.1 63,799 - Ac3H11_3704 0.21 -0.6 63,849 + Ac3H11_3704 0.25 -1.1 63,864 + Ac3H11_3704 0.26 +0.6 63,864 + Ac3H11_3704 0.26 +1.2 63,864 + Ac3H11_3704 0.26 +0.7 63,864 + Ac3H11_3704 0.26 +0.4 63,864 + Ac3H11_3704 0.26 +1.5 63,864 + +2.2 63,864 + Ac3H11_3704 0.26 -0.4 63,865 - Ac3H11_3704 0.26 +0.3 63,865 - Ac3H11_3704 0.26 +0.8 63,897 + Ac3H11_3704 0.29 +0.3 63,898 - Ac3H11_3704 0.29 +0.8 63,898 - Ac3H11_3704 0.29 +0.0 64,068 + Ac3H11_3704 0.44 +0.8 64,069 - Ac3H11_3704 0.44 +0.6 64,069 - Ac3H11_3704 0.44 +0.7 64,341 + Ac3H11_3704 0.68 +0.2 64,357 - Ac3H11_3704 0.70 -1.0 64,357 - Ac3H11_3704 0.70 +0.5 64,413 + Ac3H11_3704 0.74 +0.9 64,413 + Ac3H11_3704 0.74 +0.8 64,413 + Ac3H11_3704 0.74 +0.9 64,413 + Ac3H11_3704 0.74 +0.2 64,414 - Ac3H11_3704 0.75 +0.0 64,414 - Ac3H11_3704 0.75 +0.1 64,414 - Ac3H11_3704 0.75 +1.5 64,414 - Ac3H11_3704 0.75 +1.4 64,414 - Ac3H11_3704 0.75 +1.5 64,414 - Ac3H11_3704 0.75 -0.8 64,590 + -0.1 64,591 - +1.3 65,561 + +0.3 65,561 + +0.2 65,562 - +0.7 65,562 - +0.6
Or see this region's nucleotide sequence