Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3194 and Ac3H11_3195 are separated by 143 nucleotides Ac3H11_3195 and Ac3H11_3196 are separated by 302 nucleotides
Ac3H11_3194 - FIG022979: MoxR-like ATPases, at 96,028 to 96,948
_3194
Ac3H11_3195 - FIG002343: hypothetical protein, at 97,092 to 98,126
_3195
Ac3H11_3196 - FIG001454: Transglutaminase-like enzymes, putative cysteine proteases, at 98,429 to 100,477
_3196
Position (kb) 97
98
99 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 96.274 kb on + strand, within Ac3H11_3194 at 96.274 kb on + strand, within Ac3H11_3194 at 96.274 kb on + strand, within Ac3H11_3194 at 96.275 kb on - strand, within Ac3H11_3194 at 96.694 kb on + strand, within Ac3H11_3194 at 96.694 kb on + strand, within Ac3H11_3194 at 96.694 kb on + strand, within Ac3H11_3194 at 96.695 kb on - strand, within Ac3H11_3194 at 96.695 kb on - strand, within Ac3H11_3194 at 96.695 kb on - strand, within Ac3H11_3194 at 96.695 kb on - strand, within Ac3H11_3194 at 96.695 kb on - strand, within Ac3H11_3194 at 96.817 kb on + strand, within Ac3H11_3194 at 96.817 kb on + strand, within Ac3H11_3194 at 96.817 kb on + strand, within Ac3H11_3194 at 96.817 kb on + strand, within Ac3H11_3194 at 96.817 kb on + strand, within Ac3H11_3194 at 96.817 kb on + strand, within Ac3H11_3194 at 96.817 kb on + strand, within Ac3H11_3194 at 96.818 kb on - strand, within Ac3H11_3194 at 96.818 kb on - strand, within Ac3H11_3194 at 96.905 kb on + strand at 97.036 kb on + strand at 97.037 kb on - strand at 97.037 kb on - strand at 97.242 kb on + strand, within Ac3H11_3195 at 97.242 kb on + strand, within Ac3H11_3195 at 97.242 kb on + strand, within Ac3H11_3195 at 97.242 kb on + strand, within Ac3H11_3195 at 97.242 kb on + strand, within Ac3H11_3195 at 97.242 kb on + strand, within Ac3H11_3195 at 97.243 kb on - strand, within Ac3H11_3195 at 97.243 kb on - strand, within Ac3H11_3195 at 97.243 kb on - strand, within Ac3H11_3195 at 97.243 kb on - strand, within Ac3H11_3195 at 97.243 kb on - strand, within Ac3H11_3195 at 97.314 kb on + strand, within Ac3H11_3195 at 97.314 kb on + strand, within Ac3H11_3195 at 97.314 kb on + strand, within Ac3H11_3195 at 97.314 kb on + strand, within Ac3H11_3195 at 97.315 kb on - strand, within Ac3H11_3195 at 97.315 kb on - strand, within Ac3H11_3195 at 97.315 kb on - strand, within Ac3H11_3195 at 97.315 kb on - strand, within Ac3H11_3195 at 97.315 kb on - strand, within Ac3H11_3195 at 98.037 kb on + strand at 98.037 kb on + strand at 98.038 kb on - strand at 98.124 kb on + strand at 98.124 kb on + strand at 98.125 kb on - strand at 98.125 kb on - strand at 98.128 kb on - strand at 98.362 kb on - strand at 98.663 kb on + strand, within Ac3H11_3196 at 98.663 kb on + strand, within Ac3H11_3196 at 98.663 kb on + strand, within Ac3H11_3196 at 98.663 kb on + strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 96,274 + Ac3H11_3194 0.27 +1.0 96,274 + Ac3H11_3194 0.27 +0.6 96,274 + Ac3H11_3194 0.27 -0.2 96,275 - Ac3H11_3194 0.27 +1.0 96,694 + Ac3H11_3194 0.72 +0.4 96,694 + Ac3H11_3194 0.72 -0.3 96,694 + Ac3H11_3194 0.72 -0.1 96,695 - Ac3H11_3194 0.72 +0.8 96,695 - Ac3H11_3194 0.72 -1.0 96,695 - Ac3H11_3194 0.72 +1.3 96,695 - Ac3H11_3194 0.72 +0.2 96,695 - Ac3H11_3194 0.72 -1.0 96,817 + Ac3H11_3194 0.86 +0.7 96,817 + Ac3H11_3194 0.86 -0.2 96,817 + Ac3H11_3194 0.86 +0.4 96,817 + Ac3H11_3194 0.86 +0.5 96,817 + Ac3H11_3194 0.86 -0.0 96,817 + Ac3H11_3194 0.86 -0.1 96,817 + Ac3H11_3194 0.86 +0.5 96,818 - Ac3H11_3194 0.86 +0.5 96,818 - Ac3H11_3194 0.86 +0.5 96,905 + -0.5 97,036 + +0.5 97,037 - -0.0 97,037 - +0.4 97,242 + Ac3H11_3195 0.14 +0.0 97,242 + Ac3H11_3195 0.14 -0.5 97,242 + Ac3H11_3195 0.14 -0.3 97,242 + Ac3H11_3195 0.14 -0.6 97,242 + Ac3H11_3195 0.14 -2.9 97,242 + Ac3H11_3195 0.14 -0.6 97,243 - Ac3H11_3195 0.15 +0.1 97,243 - Ac3H11_3195 0.15 +0.6 97,243 - Ac3H11_3195 0.15 -0.6 97,243 - Ac3H11_3195 0.15 +0.4 97,243 - Ac3H11_3195 0.15 +0.9 97,314 + Ac3H11_3195 0.21 -0.3 97,314 + Ac3H11_3195 0.21 -0.2 97,314 + Ac3H11_3195 0.21 +1.0 97,314 + Ac3H11_3195 0.21 +1.1 97,315 - Ac3H11_3195 0.22 -0.8 97,315 - Ac3H11_3195 0.22 +0.3 97,315 - Ac3H11_3195 0.22 -0.6 97,315 - Ac3H11_3195 0.22 +1.5 97,315 - Ac3H11_3195 0.22 +0.3 98,037 + +0.3 98,037 + -0.1 98,038 - -0.1 98,124 + -0.6 98,124 + +0.6 98,125 - +1.4 98,125 - -0.3 98,128 - -0.2 98,362 - +0.2 98,663 + Ac3H11_3196 0.11 -0.2 98,663 + Ac3H11_3196 0.11 +0.9 98,663 + Ac3H11_3196 0.11 +0.3 98,663 + Ac3H11_3196 0.11 +0.8 98,664 - Ac3H11_3196 0.11 -2.0 98,664 - Ac3H11_3196 0.11 +0.6 98,664 - Ac3H11_3196 0.11 +1.9 98,664 - Ac3H11_3196 0.11 +0.3 98,664 - Ac3H11_3196 0.11 -0.0 98,664 - Ac3H11_3196 0.11 -0.1 98,664 - Ac3H11_3196 0.11 +0.7
Or see this region's nucleotide sequence